BLASTX nr result

ID: Panax21_contig00013817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013817
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ...   339   3e-91
ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo...   313   2e-83
ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc...   309   3e-82
ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|1...   306   3e-81
ref|XP_002298805.1| predicted protein [Populus trichocarpa] gi|2...   299   3e-79

>ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera]
           gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5
           homolog A isoform 2 [Vitis vinifera]
           gi|296088090|emb|CBI35449.3| unnamed protein product
           [Vitis vinifera]
          Length = 383

 Score =  339 bits (869), Expect = 3e-91
 Identities = 167/230 (72%), Positives = 191/230 (83%)
 Frame = -2

Query: 691 LEGSQKELNVNLSKCSKVLEKVFNPDISKACRNVDFDLHIVNQIILSHLYREGLFDTADC 512
           LEGSQKELN+NLSK  ++LEK FNPDISKA RNVDFD H VNQII SH YR+GLFD  +C
Sbjct: 72  LEGSQKELNMNLSKYPRLLEKSFNPDISKAYRNVDFDFHTVNQIIASHFYRQGLFDIGEC 131

Query: 511 LINEAGEPEAINLKCLFVEMHQILEALRSRNVEPAINWASANREKLKQISPNLELKLHRL 332
           LINEAGEPE   LK  F+EM QIL+A+++R++EPA+NW S NREKLKQ   NLELKLHRL
Sbjct: 132 LINEAGEPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNREKLKQNGSNLELKLHRL 191

Query: 331 QFVEILQKRSRTEALKYARTYLAPFAFVHMDEVQKLMGCLLWAGKLDTSPYSDLMAASHW 152
           QFVEILQK  R +AL YARTYLAPFA +HMDE+QKLM CLLW G+LD+SPYS+LM  S W
Sbjct: 192 QFVEILQKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWVGRLDSSPYSELMVPSLW 251

Query: 151 ENLVEEITLHFCSSVGQSNQSPLSVVLAAGVEGLPTLLKLANVMAVKKQE 2
           E L EE+T  FCS +GQS +SPLSV +AAG+EGLPTLLKLANVMA KKQE
Sbjct: 252 EKLAEELTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANVMAAKKQE 301


>ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max]
           gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5
           homolog A-like isoform 2 [Glycine max]
          Length = 385

 Score =  313 bits (803), Expect = 2e-83
 Identities = 152/230 (66%), Positives = 187/230 (81%)
 Frame = -2

Query: 691 LEGSQKELNVNLSKCSKVLEKVFNPDISKACRNVDFDLHIVNQIILSHLYREGLFDTADC 512
           LEGS KELN++L+K  K+LEK+ NPDISKA RNVDFD HIVNQII +H Y +GLFD  D 
Sbjct: 74  LEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVNQIIANHFYHQGLFDLGDS 133

Query: 511 LINEAGEPEAINLKCLFVEMHQILEALRSRNVEPAINWASANREKLKQISPNLELKLHRL 332
           +INEAGEP+A  L+  F+EMHQI+ A+R RN++PA+ W SANREKL QI  NLELK+H L
Sbjct: 134 IINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLVQIGSNLELKIHTL 193

Query: 331 QFVEILQKRSRTEALKYARTYLAPFAFVHMDEVQKLMGCLLWAGKLDTSPYSDLMAASHW 152
           QFVE+LQ  +R +ALKYARTYLAPFA ++  E  KLMGCLL+AG+L++SPYS+L++  HW
Sbjct: 194 QFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLESSPYSELLSPIHW 253

Query: 151 ENLVEEITLHFCSSVGQSNQSPLSVVLAAGVEGLPTLLKLANVMAVKKQE 2
           E   EE+T  FC+ +GQS ++PLSV +AAGVEGLPTLLKLANVMA KKQE
Sbjct: 254 EMTTEELTRQFCTLLGQSYENPLSVAVAAGVEGLPTLLKLANVMAAKKQE 303


>ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max]
          Length = 385

 Score =  309 bits (792), Expect = 3e-82
 Identities = 150/230 (65%), Positives = 186/230 (80%)
 Frame = -2

Query: 691 LEGSQKELNVNLSKCSKVLEKVFNPDISKACRNVDFDLHIVNQIILSHLYREGLFDTADC 512
           LEGS KELN++L+K  K+LEK+ NPDISKA RNVDFD HIV+QII +H YR+GLFD  D 
Sbjct: 74  LEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVDQIIANHFYRQGLFDLGDS 133

Query: 511 LINEAGEPEAINLKCLFVEMHQILEALRSRNVEPAINWASANREKLKQISPNLELKLHRL 332
           +INEAGEP+A  L+  F+EMHQI+ A+R RN++PA+ W SANREKL QI  NLELK+H L
Sbjct: 134 IINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLVQIGSNLELKIHTL 193

Query: 331 QFVEILQKRSRTEALKYARTYLAPFAFVHMDEVQKLMGCLLWAGKLDTSPYSDLMAASHW 152
           QFVE+LQ  +R +ALKYARTYLAPFA ++  E  KLMGCLL+AG+L++SPYS+L++  HW
Sbjct: 194 QFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLESSPYSELLSPIHW 253

Query: 151 ENLVEEITLHFCSSVGQSNQSPLSVVLAAGVEGLPTLLKLANVMAVKKQE 2
           E   EE+   FC+ +GQS ++PLSV +AAGVEGLP LLKLANVMA KKQE
Sbjct: 254 EMTTEELARQFCTLLGQSYENPLSVAVAAGVEGLPILLKLANVMAAKKQE 303


>ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|118480973|gb|ABK92440.1|
           unknown [Populus trichocarpa]
           gi|222849617|gb|EEE87164.1| predicted protein [Populus
           trichocarpa]
          Length = 384

 Score =  306 bits (784), Expect = 3e-81
 Identities = 152/230 (66%), Positives = 182/230 (79%)
 Frame = -2

Query: 691 LEGSQKELNVNLSKCSKVLEKVFNPDISKACRNVDFDLHIVNQIILSHLYREGLFDTADC 512
           LEGSQKELN+NLSK  KVLEK F PDISKA R+VDFD HIVNQII SH Y +GLFD  DC
Sbjct: 74  LEGSQKELNLNLSKFPKVLEKSF-PDISKAYRDVDFDFHIVNQIIASHFYHQGLFDLGDC 132

Query: 511 LINEAGEPEAINLKCLFVEMHQILEALRSRNVEPAINWASANREKLKQISPNLELKLHRL 332
           LINEAGEPEA  L+  F+E+HQILEA+R +N+EPA+ WAS NREKL Q   N+ELKLH+L
Sbjct: 133 LINEAGEPEAAALRSHFLELHQILEAMRIKNIEPALKWASTNREKLVQNGSNIELKLHQL 192

Query: 331 QFVEILQKRSRTEALKYARTYLAPFAFVHMDEVQKLMGCLLWAGKLDTSPYSDLMAASHW 152
           QFVEIL++ +R +AL YA+T+LA FA  H+ E QKL+ C++W G+L+  P+S+L    HW
Sbjct: 193 QFVEILKRGNRADALNYAKTHLASFASSHLKEFQKLIVCIMWIGRLENCPHSELFTPIHW 252

Query: 151 ENLVEEITLHFCSSVGQSNQSPLSVVLAAGVEGLPTLLKLANVMAVKKQE 2
           E L EE+   FC+ VGQS QSPLSV + AG+EGLPTLLKLANVMA KKQE
Sbjct: 253 EKLTEELARDFCNFVGQSLQSPLSVAIVAGIEGLPTLLKLANVMAAKKQE 302


>ref|XP_002298805.1| predicted protein [Populus trichocarpa] gi|222846063|gb|EEE83610.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  299 bits (766), Expect = 3e-79
 Identities = 150/230 (65%), Positives = 177/230 (76%)
 Frame = -2

Query: 691 LEGSQKELNVNLSKCSKVLEKVFNPDISKACRNVDFDLHIVNQIILSHLYREGLFDTADC 512
           LEGSQKELN+NLSK  K+LEK F PDIS A RNVDFD HIVNQII SH YR+GLFD  DC
Sbjct: 74  LEGSQKELNLNLSKLPKILEKSF-PDISMAYRNVDFDFHIVNQIIASHFYRQGLFDLGDC 132

Query: 511 LINEAGEPEAINLKCLFVEMHQILEALRSRNVEPAINWASANREKLKQISPNLELKLHRL 332
           LINEAGEPEA  L+   +E+HQILEA+R +N+EPA+ W S NREKL Q   NLELKLH+ 
Sbjct: 133 LINEAGEPEAAALRSHLLELHQILEAMRIKNIEPALKWVSTNREKLMQNGSNLELKLHQQ 192

Query: 331 QFVEILQKRSRTEALKYARTYLAPFAFVHMDEVQKLMGCLLWAGKLDTSPYSDLMAASHW 152
           QFVEIL++ SR +AL Y +T+LA FA  HM E QKL  C++W G+L+  P+S+L A   W
Sbjct: 193 QFVEILKRGSRADALNYVKTHLASFASSHMKEFQKLTVCIMWMGRLEKCPHSELFAPICW 252

Query: 151 ENLVEEITLHFCSSVGQSNQSPLSVVLAAGVEGLPTLLKLANVMAVKKQE 2
           E L EE+   FC+ +GQS QSPLSV +AAG+EGLPTLLKL NVMA KKQE
Sbjct: 253 EKLTEELNRDFCNFIGQSLQSPLSVAIAAGIEGLPTLLKLVNVMAAKKQE 302


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