BLASTX nr result

ID: Panax21_contig00013683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013683
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24728.3| unnamed protein product [Vitis vinifera]              233   8e-59
gb|AAK95390.1| ribosomal protein L2 [Solanum lycopersicum]            226   7e-57
gb|AFK39329.1| unknown [Lotus japonicus]                              222   1e-55
ref|XP_003593713.1| 60S ribosomal protein L2 [Medicago truncatul...   222   1e-55
ref|XP_003548254.1| PREDICTED: 60S ribosomal protein L2, mitocho...   221   2e-55

>emb|CBI24728.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  233 bits (593), Expect = 8e-59
 Identities = 135/235 (57%), Positives = 150/235 (63%)
 Frame = -1

Query: 926 ALFRVRKVSLTLLSNLLHPPVRPFSTSSNAIGSQSSSTNKMSNHVPCSLILASSDMRIGN 747
           AL R R  S TLL  LL P V      +N      SS  K S H                
Sbjct: 2   ALVRARAASSTLLKRLLFPSV------ANPSHRNLSSVAKDSPH---------------- 39

Query: 746 KIHNIDPGSSQSSALTNPMFNFLDISSQTGSCMPISMMRIGTLIHNIEMRPGQGGKLVRA 567
                    +   ++ N MF+ LDI+SQ GSCMP++ MRIGT+IHNIE+ PGQGGKLVRA
Sbjct: 40  --------DAFRESMMNQMFS-LDINSQIGSCMPLAAMRIGTIIHNIEINPGQGGKLVRA 90

Query: 566 AGTVAKILKEPAASKYVLVRLPSGREKLIDTECRATIGRVSNLEHGAKKLRKAGHSRWLG 387
           AGT AK+LKEP  S+YVLVR+PSG +KLIDT CRATIG VSN  HGAKKLRKAG SRWLG
Sbjct: 91  AGTSAKLLKEPT-SRYVLVRMPSGVQKLIDTRCRATIGTVSNPGHGAKKLRKAGQSRWLG 149

Query: 386 RRPVVRGVAMNPIDHPXXXXXXXXXXXXXXGRVSRTPWGKPTKSGYKTGPLKRRK 222
           RRPVVRGVAMNP+DHP              GR S TPWGKPTK GYKTGPLKRRK
Sbjct: 150 RRPVVRGVAMNPVDHPHGGGEGRSKSGGSHGRGSLTPWGKPTKCGYKTGPLKRRK 204


>gb|AAK95390.1| ribosomal protein L2 [Solanum lycopersicum]
          Length = 202

 Score =  226 bits (576), Expect = 7e-57
 Identities = 119/166 (71%), Positives = 128/166 (77%), Gaps = 2/166 (1%)
 Frame = -1

Query: 713 SSALTNPMFNF-LDISSQTGSCMPISMMRIGTLIHNIEMRPGQGGKLVRAAGTVAKILKE 537
           S  L + M  F LDISSQ GSCMP+ MMRIGTLIHNIE+RPGQGGKLVR+AGT AKIL E
Sbjct: 37  SKELESMMEQFSLDISSQIGSCMPLGMMRIGTLIHNIELRPGQGGKLVRSAGTCAKILTE 96

Query: 536 PAAS-KYVLVRLPSGREKLIDTECRATIGRVSNLEHGAKKLRKAGHSRWLGRRPVVRGVA 360
           P AS KY  V+LPSG +KLID +CRATIG+VSN EHG KKLRKAG SRWLGRRP VRGVA
Sbjct: 97  PNASTKYCEVKLPSGVKKLIDVKCRATIGQVSNPEHGTKKLRKAGQSRWLGRRPTVRGVA 156

Query: 359 MNPIDHPXXXXXXXXXXXXXXGRVSRTPWGKPTKSGYKTGPLKRRK 222
           MNP+DHP              GR S TPWGKPTK GYKTGPLKRRK
Sbjct: 157 MNPVDHPHGGGEGRSKSSGSHGRGSLTPWGKPTKGGYKTGPLKRRK 202


>gb|AFK39329.1| unknown [Lotus japonicus]
          Length = 192

 Score =  222 bits (565), Expect = 1e-55
 Identities = 110/154 (71%), Positives = 123/154 (79%)
 Frame = -1

Query: 683 FLDISSQTGSCMPISMMRIGTLIHNIEMRPGQGGKLVRAAGTVAKILKEPAASKYVLVRL 504
           F DI+SQ GSCMP+S MRIGT+IHNIEM PGQGGKLVRAAGT AKILKEP  S Y L++L
Sbjct: 40  FSDINSQIGSCMPLSSMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPT-SAYCLIQL 98

Query: 503 PSGREKLIDTECRATIGRVSNLEHGAKKLRKAGHSRWLGRRPVVRGVAMNPIDHPXXXXX 324
           PSG +KLID+ CRAT+G VSN  HG +KLRKAGHSRWLGRRPVVRGVAMNP+DHP     
Sbjct: 99  PSGVKKLIDSRCRATVGVVSNPTHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGE 158

Query: 323 XXXXXXXXXGRVSRTPWGKPTKSGYKTGPLKRRK 222
                    G+ SRTPWGKPTK G+KTGPLKR+K
Sbjct: 159 GRSKSSGRWGKGSRTPWGKPTKGGFKTGPLKRKK 192


>ref|XP_003593713.1| 60S ribosomal protein L2 [Medicago truncatula]
           gi|355482761|gb|AES63964.1| 60S ribosomal protein L2
           [Medicago truncatula]
          Length = 175

 Score =  222 bits (565), Expect = 1e-55
 Identities = 110/154 (71%), Positives = 123/154 (79%)
 Frame = -1

Query: 683 FLDISSQTGSCMPISMMRIGTLIHNIEMRPGQGGKLVRAAGTVAKILKEPAASKYVLVRL 504
           + DI+SQ GSCMP+S MRIGT+IHNIE+ PGQGGKLVRAAGT AKILKEP  S YVL++L
Sbjct: 23  YSDINSQIGSCMPLSSMRIGTIIHNIELNPGQGGKLVRAAGTNAKILKEPT-SAYVLIQL 81

Query: 503 PSGREKLIDTECRATIGRVSNLEHGAKKLRKAGHSRWLGRRPVVRGVAMNPIDHPXXXXX 324
           PSG +KLIDT CRAT+G VSN  HG +KLRKAGHSRWL RRPVVRGVAMNP+DHP     
Sbjct: 82  PSGVKKLIDTRCRATVGTVSNPTHGDRKLRKAGHSRWLNRRPVVRGVAMNPVDHPHGGGE 141

Query: 323 XXXXXXXXXGRVSRTPWGKPTKSGYKTGPLKRRK 222
                    G+ SRTPWGKPTK G+KTGPLKRRK
Sbjct: 142 GKSKSSGGWGKGSRTPWGKPTKGGFKTGPLKRRK 175


>ref|XP_003548254.1| PREDICTED: 60S ribosomal protein L2, mitochondrial-like [Glycine
           max]
          Length = 195

 Score =  221 bits (563), Expect = 2e-55
 Identities = 112/173 (64%), Positives = 128/173 (73%)
 Frame = -1

Query: 740 HNIDPGSSQSSALTNPMFNFLDISSQTGSCMPISMMRIGTLIHNIEMRPGQGGKLVRAAG 561
           H     ++ S   T     + DI+S+ GSCMP+S MRIGT+IHNIE+ PGQGGKLVRAAG
Sbjct: 24  HFSSEATNSSPHSTRESMMYSDINSRIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRAAG 83

Query: 560 TVAKILKEPAASKYVLVRLPSGREKLIDTECRATIGRVSNLEHGAKKLRKAGHSRWLGRR 381
           T AKILKEP  S Y L++LPSG +KLID+ CRAT+G VSN  HG +KLRKAGHSRWLGRR
Sbjct: 84  TSAKILKEPT-SAYCLIQLPSGVKKLIDSRCRATVGVVSNPSHGDRKLRKAGHSRWLGRR 142

Query: 380 PVVRGVAMNPIDHPXXXXXXXXXXXXXXGRVSRTPWGKPTKSGYKTGPLKRRK 222
           PVVRGVAMNP+DHP              GR S TPWGKPTKSGYKTGPLKRR+
Sbjct: 143 PVVRGVAMNPVDHPHGGGEGKSKSGGRFGRGSLTPWGKPTKSGYKTGPLKRRR 195


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