BLASTX nr result

ID: Panax21_contig00013668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013668
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]      149   4e-34
emb|CBI27170.3| unnamed protein product [Vitis vinifera]              143   3e-32
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...   132   8e-29
gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]      130   2e-28
ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ...   130   3e-28

>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score =  149 bits (377), Expect = 4e-34
 Identities = 80/184 (43%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
 Frame = -3

Query: 651 MAQAFSHDEIKSLWSQGQESKKLHFISQDKPSLVGQMNARDLSIVWGSDHRYWKWTHNIK 472
           MAQ    D+I SLW+QG ++ K      DK S    + A++LSIVWGSD RYWKW     
Sbjct: 1   MAQV-QRDDIVSLWTQGFQALK------DKSSCAAVLTAKELSIVWGSDPRYWKWVSKTS 53

Query: 471 EDDCYDNVEVAELLNVCWLQIDGKYEAQKLKEGLMYEVQFVVMLKDNLNITSPVNLTLAL 292
             + ++ ++ AEL+ VCWLQIDG Y A+ L +G+ Y V FVV L  N  +  PV L L  
Sbjct: 54  PVN-FEALDAAELIEVCWLQIDGTYNARNLNKGVKYGVYFVVELNSNPCMNGPVTLKLTR 112

Query: 291 PDGTKQESKQYLMEEPRNRMIGITAGQF--QAPNMSGDINFSLMETSGSIWKKGLVVIGA 118
           P+G+ +E K+ L  +PRN+ +G+  G+F   A      + FS+    G+ WK GL VIGA
Sbjct: 113 PNGSPEEHKEDLQTKPRNKWVGLKVGEFTNTASGCDNTVKFSMNGCDGTTWKTGLTVIGA 172

Query: 117 LIVP 106
            IVP
Sbjct: 173 AIVP 176


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  143 bits (360), Expect = 3e-32
 Identities = 78/148 (52%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
 Frame = -3

Query: 537 ARDLSIVWGSDHRYWKWTHNIKEDDCYDNVEVAELLNVCWLQIDGKYEAQKLKEGLMYEV 358
           AR+LSI W  D RYW W    +  D +  V+VAEL+NVCWL++ GK+E  KL  G+MY+V
Sbjct: 94  ARNLSITWAEDSRYWHWLKIKETSDVF--VDVAELINVCWLEVHGKFETAKLSPGIMYKV 151

Query: 357 QFVVMLKD-NLNITSPVNLTLALPDGTKQESKQYLMEEPRNRMIGITAGQFQ--APNMSG 187
            FVVM+KD       PVNL LALPDG  QE K+ L E+P+ + I I  GQFQ  A N+ G
Sbjct: 152 AFVVMMKDPAYGWGVPVNLKLALPDGNTQEHKENLREKPKGQWIEIPVGQFQTSAENI-G 210

Query: 186 DINFSLMETSGSIWKKGLVVIGALIVPK 103
           +I FSL E  G  WK GLVV G +I PK
Sbjct: 211 EIEFSLFEYEGGDWKSGLVVKGVIIQPK 238


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  132 bits (331), Expect = 8e-29
 Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
 Frame = -3

Query: 537 ARDLSIVWGSDHRYWKWTHNIKEDDCYDNVEVAELLNVCWLQIDGKYEAQKLKEGLMYEV 358
           A+DLSI WG D RYWKW    +  D    V+VAELL+VCWL+I GK+  + L  G++YEV
Sbjct: 135 AKDLSITWGGDARYWKWPSICESGDV--TVDVAELLDVCWLEIYGKFNTKMLSPGILYEV 192

Query: 357 QFVVMLKD-NLNITSPVNLTLALPDGTKQESKQYLMEEPRNRMIGITAGQF-QAPNMSGD 184
            FV+ LKD       PVN++L LP+G KQE K+ L  +PR + I +  G+F  +P   G+
Sbjct: 193 VFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPVGEFITSPENVGE 252

Query: 183 INFSLMETSGSIWKKGLVVIGALIVPK 103
           I F + E  G  WK+GLV+ G  I PK
Sbjct: 253 IQFGMHEYDGGEWKRGLVIKGIAIRPK 279


>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score =  130 bits (328), Expect = 2e-28
 Identities = 75/184 (40%), Positives = 104/184 (56%), Gaps = 2/184 (1%)
 Frame = -3

Query: 651 MAQAFSHDEIKSLWSQGQESKKLHFISQDKPSLVGQMNARDLSIVWGSDHRYWKWTHNIK 472
           MAQ  S  EI +  ++  E  K +       S    ++A++LSIVWGSD RYW  T    
Sbjct: 1   MAQLNSSHEIINSCARDLEGLKQNIAQ----SCAAVLSAKELSIVWGSDSRYWT-TATET 55

Query: 471 EDDCYDNVEVAELLNVCWLQIDGKYEAQKLKEGLMYEVQFVVMLKDNLNITSPVNLTLAL 292
             +   +V+V+EL+ VCWLQIDGKY A KL +G+ Y V F+V LK NL +   V L L  
Sbjct: 56  APNSNQSVDVSELIEVCWLQIDGKYSASKLNQGVKYGVYFIVKLKTNLRLNGKVTLKLTR 115

Query: 291 PDGTKQESKQYLMEEPRNRMIGITAGQF--QAPNMSGDINFSLMETSGSIWKKGLVVIGA 118
           PDG    ++  L + P+N  + +  G+F   A     ++ FS+    G+ WK GLVVIGA
Sbjct: 116 PDGRTVVTRDDLDKRPKNTWVALKVGEFMTNARTCHRNVKFSMNGCDGTSWKSGLVVIGA 175

Query: 117 LIVP 106
           +IVP
Sbjct: 176 VIVP 179


>ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula]
           gi|355508931|gb|AES90073.1| F-box protein PP2-B10
           [Medicago truncatula] gi|388501714|gb|AFK38923.1|
           unknown [Medicago truncatula]
          Length = 293

 Score =  130 bits (326), Expect = 3e-28
 Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
 Frame = -3

Query: 648 AQAFSHDEIKSLWSQGQESKKLHFISQDKPSLVGQMNARDLSIVWGSDHRYWKWTHNIKE 469
           A  F H + K  W + + SK   F+          + AR LSI W  D  YWKW    ++
Sbjct: 120 AGVFLHHKTKKYWVE-KNSKANCFM----------LYARALSITWAEDPNYWKWIQ--QK 166

Query: 468 DDCYDNVEVAELLNVCWLQIDGKYEAQKLKEGLMYEVQFVVMLKDNL-NITSPVNLTLAL 292
           D      EVAEL  VCWL++ GK++ +KL  G++Y+V F++MLKD       PVN+ L L
Sbjct: 167 DVSEGTTEVAELKRVCWLEVHGKFDTRKLSPGILYQVSFIIMLKDPAQGWELPVNVRLVL 226

Query: 291 PDGTKQESKQYLMEEPRNRMIGITAGQFQAPNM-SGDINFSLMETSGSIWKKGLVVIGAL 115
           P G KQ+ K+ LME+ R R I +  G+F       G++  S+ E  G +WK+GLV+ G  
Sbjct: 227 PGGKKQQHKENLMEKLRARWIEVPVGEFVVSEKDGGEMEISMFEYEGGMWKQGLVIKGIA 286

Query: 114 IVPKLF 97
           I PK+F
Sbjct: 287 IKPKIF 292


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