BLASTX nr result

ID: Panax21_contig00013615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013615
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37208.3| unnamed protein product [Vitis vinifera]               98   6e-18
ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258...    98   6e-18
emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]    96   3e-17
ref|XP_002303106.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-12
ref|XP_002533631.1| hypothetical protein RCOM_0996210 [Ricinus c...    74   1e-10

>emb|CBI37208.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 87/287 (30%), Positives = 113/287 (39%), Gaps = 27/287 (9%)
 Frame = -3

Query: 1341 CHCYVCDSLAPCLHWGTG-----HCDATEKLEFWKDQRNCLKNSHQATVPVPESPTSTQL 1177
            CHCYVCDSLAPC HWGTG     HC AT K EFW DQR   +      VP+ +  T+   
Sbjct: 134  CHCYVCDSLAPCGHWGTGMNIVDHCHATNKDEFWVDQRKSFRLGKSQQVPIQKHATALP- 192

Query: 1176 TEPIQIKQVPVSTPLEPNYVPQGQVRTQASINTCMLKGN*FWQPKYL----N*KQKPTLW 1009
                Q+ Q      L+PN + Q QV    SI+ C  + N    P       N + +  L 
Sbjct: 193  ----QVSQNSSFPLLQPNPIWQNQVSRPTSIHACSSRTN-VGVPNTASLTRNQRSEVDLG 247

Query: 1008 MCFAQKHISTESDIATLAQYRYGLNVAXXXXXXXXXXXXXXXXXXXQHLRNTGNNFSPTN 829
                Q H+ ++    T                                     N  +  +
Sbjct: 248  RTRFQPHLVSQKPHGT-----------------------------------QSNIINRKD 272

Query: 828  RRHIVGNLGPHVNSSSVMFKRFGSAEVDWISNRK-YGSSNNKLLAQYV------------ 688
            R H  G LGP  +SS  MFKR GS      +NR  YG  NN   A               
Sbjct: 273  RGHGFGPLGPQFSSSQPMFKRTGSGRGALTANRSGYGLPNNINHAYTTFSRNVPQRATPN 332

Query: 687  -----RWKDLRGQMSSGSNPYRLSSQPNMHKNSSNSVPSHPQQAFRP 562
                 RW D    ++  S  ++ ++QPNM    SN+VPS PQ   +P
Sbjct: 333  DRTSSRWHDHLPGVALDSAKHQ-TTQPNMGSIFSNTVPSQPQAYGQP 378


>ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258397 [Vitis vinifera]
          Length = 511

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 87/287 (30%), Positives = 113/287 (39%), Gaps = 27/287 (9%)
 Frame = -3

Query: 1341 CHCYVCDSLAPCLHWGTG-----HCDATEKLEFWKDQRNCLKNSHQATVPVPESPTSTQL 1177
            CHCYVCDSLAPC HWGTG     HC AT K EFW DQR   +      VP+ +  T+   
Sbjct: 134  CHCYVCDSLAPCGHWGTGMNIVDHCHATNKDEFWVDQRKSFRLGKSQQVPIQKHATALP- 192

Query: 1176 TEPIQIKQVPVSTPLEPNYVPQGQVRTQASINTCMLKGN*FWQPKYL----N*KQKPTLW 1009
                Q+ Q      L+PN + Q QV    SI+ C  + N    P       N + +  L 
Sbjct: 193  ----QVSQNSSFPLLQPNPIWQNQVSRPTSIHACSSRTN-VGVPNTASLTRNQRSEVDLG 247

Query: 1008 MCFAQKHISTESDIATLAQYRYGLNVAXXXXXXXXXXXXXXXXXXXQHLRNTGNNFSPTN 829
                Q H+ ++    T                                     N  +  +
Sbjct: 248  RTRFQPHLVSQKPHGT-----------------------------------QSNIINRKD 272

Query: 828  RRHIVGNLGPHVNSSSVMFKRFGSAEVDWISNRK-YGSSNNKLLAQYV------------ 688
            R H  G LGP  +SS  MFKR GS      +NR  YG  NN   A               
Sbjct: 273  RGHGFGPLGPQFSSSQPMFKRTGSGRGALTANRSGYGLPNNINHAYTTFSRNVPQRATPN 332

Query: 687  -----RWKDLRGQMSSGSNPYRLSSQPNMHKNSSNSVPSHPQQAFRP 562
                 RW D    ++  S  ++ ++QPNM    SN+VPS PQ   +P
Sbjct: 333  DRTSSRWHDHLPGVALDSAKHQ-TTQPNMGSIFSNTVPSQPQAYGQP 378


>emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]
          Length = 441

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 86/287 (29%), Positives = 113/287 (39%), Gaps = 27/287 (9%)
 Frame = -3

Query: 1341 CHCYVCDSLAPCLHWGTG-----HCDATEKLEFWKDQRNCLKNSHQATVPVPESPTSTQL 1177
            CHCYVCDSLAPC HWGTG     HC AT K EFW +QR   +      VP+ +  T+   
Sbjct: 64   CHCYVCDSLAPCGHWGTGMNIVDHCHATNKDEFWVNQRKSFRLGKSQQVPIQKHATALP- 122

Query: 1176 TEPIQIKQVPVSTPLEPNYVPQGQVRTQASINTCMLKGN*FWQPKYL----N*KQKPTLW 1009
                Q+ Q      L+PN + Q QV    SI+ C  + N    P       N + +  L 
Sbjct: 123  ----QVSQNSSFPLLQPNPIWQNQVSRPTSIHACSSRTN-VGVPNTASLTRNQRSEVDLG 177

Query: 1008 MCFAQKHISTESDIATLAQYRYGLNVAXXXXXXXXXXXXXXXXXXXQHLRNTGNNFSPTN 829
                Q H+ ++    T                                     N  +  +
Sbjct: 178  RTRFQPHLVSQKPHGT-----------------------------------QSNIXNRKD 202

Query: 828  RRHIVGNLGPHVNSSSVMFKRFGSAEVDWISNRK-YGSSNNKLLAQYV------------ 688
            R H  G LGP  +SS  MFKR GS      +NR  YG  NN   A               
Sbjct: 203  RGHGFGPLGPQFSSSQPMFKRTGSGRGALTANRSGYGLPNNINHAYTTFSRNVPQRATPN 262

Query: 687  -----RWKDLRGQMSSGSNPYRLSSQPNMHKNSSNSVPSHPQQAFRP 562
                 RW D    ++  S  ++ ++QPNM    SN+VPS PQ   +P
Sbjct: 263  DRTSSRWHDHLPGVALDSAKHQ-TTQPNMGSIFSNTVPSQPQAYGQP 308


>ref|XP_002303106.1| predicted protein [Populus trichocarpa] gi|222844832|gb|EEE82379.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
 Frame = -3

Query: 1341 CHCYVCDSLAPCLHWGTG-----HCDATEKLEFWKDQRNCLKNSHQATVPVPESPTST-- 1183
            CHCYVCDSLAPC+HWGTG     HC AT+K E WK+QR   +    A VPV + P  T  
Sbjct: 210  CHCYVCDSLAPCVHWGTGVSTIDHCHATDKQETWKNQRKIYRTGKDAPVPVSKLPDVTVP 269

Query: 1182 ----QLTEPIQIKQVPVSTPLEPNYVPQGQVRTQASINTC 1075
                 L     +  VP +  L  N + Q QV     I +C
Sbjct: 270  MALPLLNHVGSLDIVPHNQLLTHNPMLQNQVSRIHKIRSC 309


>ref|XP_002533631.1| hypothetical protein RCOM_0996210 [Ricinus communis]
            gi|223526489|gb|EEF28760.1| hypothetical protein
            RCOM_0996210 [Ricinus communis]
          Length = 462

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
 Frame = -3

Query: 1341 CHCYVCDSLAPCLHWGTG-----HCDATEKLEFWKDQRNCLKNSHQATVPVPESPTSTQL 1177
            CHC+VCDSLAPC HW TG     HC AT+KL+ WK QR   +      +PV E P   QL
Sbjct: 97   CHCFVCDSLAPCAHWATGVPTFDHCHATDKLDTWKHQRESFRLGKYVPLPVSEYP-DVQL 155

Query: 1176 TEPI-QIKQVPVS--TPLEPNYVPQGQVRTQASINTC 1075
              P+ Q+ QV       L PN     +V    +I  C
Sbjct: 156  PVPVHQLNQVAPREIIQLAPNLGTHNKVCRPITIRAC 192


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