BLASTX nr result

ID: Panax21_contig00013613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013613
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin...   286   6e-75
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]   286   6e-75
ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69
ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|2235...   256   5e-66
ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|2235...   252   7e-65

>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1065

 Score =  286 bits (731), Expect = 6e-75
 Identities = 157/296 (53%), Positives = 205/296 (69%), Gaps = 8/296 (2%)
 Frame = -3

Query: 866  VHAGANIQGMPATQNIGVYSSHTYXXXXXXXXXXXSTPDPQPLARAPSPRIPPTGGGRVS 687
            + +GA++QG    QNIG  +S+TY           +TPDPQ +ARAPSP + P GGGR +
Sbjct: 257  LRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRSTTPDPQLIARAPSPCLTPIGGGRTA 316

Query: 686  SLDLRNTNGSNSFNGVLPGMSETEDLVAALSEIAISATSVLDEENHARSRTQQDIDDLQN 507
              + R  NGS+SFN V P M+E+ DLVAALS + +S   V+DEENH  S+ +QD+++ Q+
Sbjct: 317  ISEKRGINGSSSFNSVPPSMNESADLVAALSGMDLSTNGVIDEENHLPSQIEQDVENHQS 376

Query: 506  -LFHLQGDPNHIKQHLYLNNSESGKLHLHSISQSAKGSY-----GSGVGVDLNNYSLLAD 345
             LF+LQG  ++IKQH YL  SESG L + S  QS K SY      +GVG +LNN SL+AD
Sbjct: 377  YLFNLQGGQSNIKQHSYLKKSESGHLQIPSAPQSGKASYSDSVKSNGVGSELNN-SLMAD 435

Query: 344  VQAELHKPAMVSANSYLKGSSTPTLNSGGSSPSQYRN-IDSPNSSFSNYGLSGYGINPSS 168
             QAELHK ++ S NSYLKGSS  + N GG  PS Y+  +DS NSS  NYGL  Y +NP+ 
Sbjct: 436  RQAELHKSSVPSGNSYLKGSSMSSHNGGGGLPSHYQQFVDSTNSSIPNYGLGAYSMNPAL 495

Query: 167  SPMLANQFGSGSLPPLFENVAAATAMGVSGMDSRVMG-GLALGPNLIAAAAELQHL 3
            + M+A+Q G+ +LPPLFENVAAA+AMGV G+DSRV+G GLA GPN+ AA +E Q+L
Sbjct: 496  ASMMASQLGAANLPPLFENVAAASAMGVPGIDSRVLGAGLASGPNIGAATSESQNL 551


>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
          Length = 1039

 Score =  286 bits (731), Expect = 6e-75
 Identities = 157/296 (53%), Positives = 205/296 (69%), Gaps = 8/296 (2%)
 Frame = -3

Query: 866  VHAGANIQGMPATQNIGVYSSHTYXXXXXXXXXXXSTPDPQPLARAPSPRIPPTGGGRVS 687
            + +GA++QG    QNIG  +S+TY           +TPDPQ +ARAPSP + P GGGR +
Sbjct: 231  LRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRSTTPDPQLIARAPSPCLTPIGGGRTA 290

Query: 686  SLDLRNTNGSNSFNGVLPGMSETEDLVAALSEIAISATSVLDEENHARSRTQQDIDDLQN 507
              + R  NGS+SFN V P M+E+ DLVAALS + +S   V+DEENH  S+ +QD+++ Q+
Sbjct: 291  ISEKRGINGSSSFNSVPPSMNESADLVAALSGMDLSTNGVIDEENHLPSQIEQDVENHQS 350

Query: 506  -LFHLQGDPNHIKQHLYLNNSESGKLHLHSISQSAKGSY-----GSGVGVDLNNYSLLAD 345
             LF+LQG  ++IKQH YL  SESG L + S  QS K SY      +GVG +LNN SL+AD
Sbjct: 351  YLFNLQGGQSNIKQHSYLKKSESGHLQIPSAPQSGKASYSDSVKSNGVGSELNN-SLMAD 409

Query: 344  VQAELHKPAMVSANSYLKGSSTPTLNSGGSSPSQYRN-IDSPNSSFSNYGLSGYGINPSS 168
             QAELHK ++ S NSYLKGSS  + N GG  PS Y+  +DS NSS  NYGL  Y +NP+ 
Sbjct: 410  RQAELHKSSVPSGNSYLKGSSMSSHNGGGGLPSHYQQFVDSTNSSIPNYGLGAYSMNPAL 469

Query: 167  SPMLANQFGSGSLPPLFENVAAATAMGVSGMDSRVMG-GLALGPNLIAAAAELQHL 3
            + M+A+Q G+ +LPPLFENVAAA+AMGV G+DSRV+G GLA GPN+ AA +E Q+L
Sbjct: 470  ASMMASQLGAANLPPLFENVAAASAMGVPGIDSRVLGAGLASGPNIGAATSESQNL 525


>ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|222847117|gb|EEE84664.1|
            predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  267 bits (682), Expect = 3e-69
 Identities = 150/295 (50%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
 Frame = -3

Query: 866  VHAGANIQGMPATQNIGVYSSHTYXXXXXXXXXXXSTPDPQPLARAPSPRIPPTGGGRVS 687
            + +GAN QG    QNIG   S++Y           +TPDPQ +ARAPSP   P G GRVS
Sbjct: 260  LRSGANGQGSSPVQNIG-QPSYSYAAALGASLSRSTTPDPQHVARAPSPCPTPIGQGRVS 318

Query: 686  SLDLRNTNGSNSFNGVLPGMSETEDLVAALSEIAISATSVLDEENHARSRTQQDIDDLQN 507
            + + R T  SNSF GV  G+ E  +LVAA S + ++    +DEE+H  S+ +QD+D  QN
Sbjct: 319  TSEKRGTASSNSFIGVSSGIREPSELVAAFSGMNLATNGGVDEESHLPSQAEQDVDSHQN 378

Query: 506  -LFHLQGDPNHIKQHLYLNNSESGKLHLHSISQSAKGSYG-----SGVGVDLNNYSLLAD 345
             LF LQG  NH+KQ+ Y+N SESG LH+ S+ QSA  SY      +G G +LN+ SL+AD
Sbjct: 379  YLFGLQGGQNHLKQNTYINKSESGHLHMSSVPQSANLSYSDLARSNGGGSNLNSPSLMAD 438

Query: 344  VQAELHKPAMVSANSYLKGSSTPTLNSGGSSPSQYRNIDSPNSSFSNYGLSGYGINPSSS 165
             Q EL K A  S NSY+KGS T  L  GG  P+QY+++D  NSS  NYGLSGY +NP+ +
Sbjct: 439  RQVELQKLAFPSGNSYMKGSPTSALGGGGGLPAQYQHLDGINSSLPNYGLSGYSMNPALA 498

Query: 164  PMLANQFGSGSLPPLFENVAAATAMGVSGMDSRVMG-GLALGPNLIAAAAELQHL 3
             M+A Q G+G+LPPLFENVAAA+AM + GMDSRV+G GL  G NL AA+ E  +L
Sbjct: 499  SMIAQQLGTGNLPPLFENVAAASAMAIPGMDSRVLGSGLGSGTNLTAASLESYNL 553


>ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|223536477|gb|EEF38124.1|
           pumilio, putative [Ricinus communis]
          Length = 1011

 Score =  256 bits (654), Expect = 5e-66
 Identities = 143/289 (49%), Positives = 180/289 (62%)
 Frame = -3

Query: 869 AVHAGANIQGMPATQNIGVYSSHTYXXXXXXXXXXXSTPDPQPLARAPSPRIPPTGGGRV 690
           A+ + AN QG+     +G  +SH+Y           +TPDPQ +ARAPSPRIPP GGGR 
Sbjct: 247 ALRSVANKQGVSVVPTVGATASHSYASVLGASLSRSTTPDPQLVARAPSPRIPPIGGGRA 306

Query: 689 SSLDLRNTNGSNSFNGVLPGMSETEDLVAALSEIAISATSVLDEENHARSRTQQDIDDLQ 510
           +S+D R+ NGSNSF GV   ++E+ +LVAALS + +S    +DEENH RS+ Q +IDD  
Sbjct: 307 NSIDKRDVNGSNSFKGVSSSLNESAELVAALSGLNLST---VDEENHLRSQRQHNIDDHH 363

Query: 509 NLFHLQGDPNHIKQHLYLNNSESGKLHLHSISQSAKGSYGSGVGVDLNNYSLLADVQAEL 330
           NLF+LQGD NH+KQ  +LN   S                                     
Sbjct: 364 NLFNLQGDQNHVKQQSFLNKPVS------------------------------------- 386

Query: 329 HKPAMVSANSYLKGSSTPTLNSGGSSPSQYRNIDSPNSSFSNYGLSGYGINPSSSPMLAN 150
                 SANSY+KG S PTL+  G SPS+  NID+ NSSF+NYGL GY +NPSS  MLA+
Sbjct: 387 ------SANSYIKGPSAPTLSGRGGSPSEQHNIDNMNSSFANYGLGGYPMNPSSPSMLAS 440

Query: 149 QFGSGSLPPLFENVAAATAMGVSGMDSRVMGGLALGPNLIAAAAELQHL 3
           Q GSGSLPPLFE+ AAA+AMG +G+DSR +G  ALGPNL+AAAAELQ+L
Sbjct: 441 QLGSGSLPPLFESAAAASAMGGTGLDSRALG--ALGPNLVAAAAELQNL 487


>ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|223536478|gb|EEF38125.1|
           pumilio, putative [Ricinus communis]
          Length = 999

 Score =  252 bits (644), Expect = 7e-65
 Identities = 144/289 (49%), Positives = 180/289 (62%)
 Frame = -3

Query: 869 AVHAGANIQGMPATQNIGVYSSHTYXXXXXXXXXXXSTPDPQPLARAPSPRIPPTGGGRV 690
           A+ + AN QG+    N+G  +SH+Y           +TPDP  +ARAPSPRIPP GGGR 
Sbjct: 248 ALRSVANKQGVSVVPNVGATASHSYASALGASLSRSTTPDPHLVARAPSPRIPPIGGGRA 307

Query: 689 SSLDLRNTNGSNSFNGVLPGMSETEDLVAALSEIAISATSVLDEENHARSRTQQDIDDLQ 510
           +S+D R+ NGSNSF GV   ++E+ +LVAALS + +S    +DEENHARS  Q +IDD  
Sbjct: 308 NSIDKRDVNGSNSFKGV-SSLNESAELVAALSGLNLST---VDEENHARSHRQHNIDDHH 363

Query: 509 NLFHLQGDPNHIKQHLYLNNSESGKLHLHSISQSAKGSYGSGVGVDLNNYSLLADVQAEL 330
           NLF+LQGD NH+KQ  +LN   S                                     
Sbjct: 364 NLFNLQGDQNHVKQQSFLNKPVS------------------------------------- 386

Query: 329 HKPAMVSANSYLKGSSTPTLNSGGSSPSQYRNIDSPNSSFSNYGLSGYGINPSSSPMLAN 150
                 SANSYLKG ST TL+  G SPS+ +NID+ NS+F NYGL GY +NPSS  MLA+
Sbjct: 387 ------SANSYLKGPSTQTLSGRGGSPSELQNIDNMNSAFPNYGLGGYPMNPSSPSMLAS 440

Query: 149 QFGSGSLPPLFENVAAATAMGVSGMDSRVMGGLALGPNLIAAAAELQHL 3
           Q GSGSLPPLFE+ AAA+AMG +G+DSR +G  ALGPNL+AAAAELQ+L
Sbjct: 441 QLGSGSLPPLFESAAAASAMGGTGLDSRALG--ALGPNLVAAAAELQNL 487


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