BLASTX nr result

ID: Panax21_contig00013562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013562
         (1678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24866.3| unnamed protein product [Vitis vinifera]               74   9e-11
ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855...    74   9e-11
ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-11
ref|XP_003627724.1| Polyadenylate-binding protein 2-A [Medicago ...    74   2e-10
ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-10

>emb|CBI24866.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 74.3 bits (181), Expect = 9e-11
 Identities = 42/89 (47%), Positives = 56/89 (62%)
 Frame = -1

Query: 1600 LKEYVIVLLKNGRRKVEARNELNVFLGDDNDSFVSWQFNH*LIIVQAVGSSRIKLDLYVQ 1421
            L EYVIVLL+NGRRK EARNELNVFLGDD+ SFVSW ++H              L LYV 
Sbjct: 38   LVEYVIVLLRNGRRKEEARNELNVFLGDDSHSFVSWLWDH----------LDSHLQLYVL 87

Query: 1420 SKDSCPNEVVKAKSMSMGPAGRIDSKIHI 1334
             ++S P+E+ + K  ++G     +  +H+
Sbjct: 88   PQESYPDEIAETKH-TLGEHTERNDSLHL 115


>ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
          Length = 700

 Score = 74.3 bits (181), Expect = 9e-11
 Identities = 42/89 (47%), Positives = 56/89 (62%)
 Frame = -1

Query: 1600 LKEYVIVLLKNGRRKVEARNELNVFLGDDNDSFVSWQFNH*LIIVQAVGSSRIKLDLYVQ 1421
            L EYVIVLL+NGRRK EARNELNVFLGDD+ SFVSW ++H              L LYV 
Sbjct: 44   LVEYVIVLLRNGRRKEEARNELNVFLGDDSHSFVSWLWDH----------LDSHLQLYVL 93

Query: 1420 SKDSCPNEVVKAKSMSMGPAGRIDSKIHI 1334
             ++S P+E+ + K  ++G     +  +H+
Sbjct: 94   PQESYPDEIAETKH-TLGEHTERNDSLHL 121


>ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|222849699|gb|EEE87246.1|
            predicted protein [Populus trichocarpa]
          Length = 762

 Score = 74.3 bits (181), Expect = 9e-11
 Identities = 41/84 (48%), Positives = 53/84 (63%)
 Frame = -1

Query: 1597 KEYVIVLLKNGRRKVEARNELNVFLGDDNDSFVSWQFNH*LIIVQAVGSSRIKLDLYVQS 1418
            KEYVIVLL+NGR K EARNELNVFLGDD++SFVSW ++H              LDLYVQ 
Sbjct: 82   KEYVIVLLRNGRDKEEARNELNVFLGDDSESFVSWLWDH----------LATNLDLYVQP 131

Query: 1417 KDSCPNEVVKAKSMSMGPAGRIDS 1346
            +++  +EV +     +   G  +S
Sbjct: 132  QETGTDEVARTNPTLVEQTGGNES 155


>ref|XP_003627724.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
            gi|355521746|gb|AET02200.1| Polyadenylate-binding protein
            2-A [Medicago truncatula]
          Length = 815

 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 41/85 (48%), Positives = 55/85 (64%)
 Frame = -1

Query: 1603 LLKEYVIVLLKNGRRKVEARNELNVFLGDDNDSFVSWQFNH*LIIVQAVGSSRIKLDLYV 1424
            +L  YVIVLLKNG+ K +A+N+LN+FLGDD+DSFVSW ++H            + +DLYV
Sbjct: 42   ILVNYVIVLLKNGKAKNQAKNDLNLFLGDDSDSFVSWLWDH----------LALNIDLYV 91

Query: 1423 QSKDSCPNEVVKAKSMSMGPAGRID 1349
            QSK    +E  K+K +S   AG  D
Sbjct: 92   QSK-GLQDEAPKSKVLSKAQAGDDD 115


>ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|222847209|gb|EEE84756.1|
            predicted protein [Populus trichocarpa]
          Length = 678

 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 41/86 (47%), Positives = 53/86 (61%)
 Frame = -1

Query: 1603 LLKEYVIVLLKNGRRKVEARNELNVFLGDDNDSFVSWQFNH*LIIVQAVGSSRIKLDLYV 1424
            +L EYVIVLL+NGR K EARNELNVFLGDD+DSFVSW ++H              LD+YV
Sbjct: 39   VLVEYVIVLLRNGRDKEEARNELNVFLGDDSDSFVSWLWDH----------LATNLDMYV 88

Query: 1423 QSKDSCPNEVVKAKSMSMGPAGRIDS 1346
            Q  ++  +EV +     +   G  +S
Sbjct: 89   QPPETHADEVARTNPTLIEQTGGNES 114


Top