BLASTX nr result
ID: Panax21_contig00013492
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00013492 (940 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309168.1| predicted protein [Populus trichocarpa] gi|2... 64 3e-19 ref|XP_002323638.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-18 ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus com... 61 2e-18 ref|XP_002265215.1| PREDICTED: F-box/LRR-repeat protein 3 [Vitis... 62 8e-17 ref|XP_003516411.1| PREDICTED: F-box/LRR-repeat protein 3-like [... 60 1e-16 >ref|XP_002309168.1| predicted protein [Populus trichocarpa] gi|222855144|gb|EEE92691.1| predicted protein [Populus trichocarpa] Length = 666 Score = 63.5 bits (153), Expect(2) = 3e-19 Identities = 30/38 (78%), Positives = 34/38 (89%) Frame = -3 Query: 170 LSKCM*VIDEGLSSLVTTNKDLRKLDITCCRKITHISI 57 LSKC+ V DEGLSSLVT +KDL+KLDITCCRKIT +SI Sbjct: 337 LSKCLGVTDEGLSSLVTKHKDLKKLDITCCRKITDVSI 374 Score = 58.2 bits (139), Expect(2) = 3e-19 Identities = 27/36 (75%), Positives = 31/36 (86%) Frame = -1 Query: 277 LQNLSMLQSIKLDSCQVTCYGLKAIGNWCISLRELS 170 L++LS+LQS+KLD C VT GLKAIGNWCISL ELS Sbjct: 301 LRSLSILQSVKLDGCPVTSAGLKAIGNWCISLSELS 336 >ref|XP_002323638.1| predicted protein [Populus trichocarpa] gi|222868268|gb|EEF05399.1| predicted protein [Populus trichocarpa] Length = 668 Score = 64.3 bits (155), Expect(2) = 1e-18 Identities = 31/43 (72%), Positives = 36/43 (83%) Frame = -3 Query: 170 LSKCM*VIDEGLSSLVTTNKDLRKLDITCCRKITHISIFCVHN 42 LSKC+ V DEGLSSLVT +KDL+KLDITCCRKIT +SI + N Sbjct: 339 LSKCVGVTDEGLSSLVTKHKDLKKLDITCCRKITDVSIAYITN 381 Score = 55.8 bits (133), Expect(2) = 1e-18 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = -1 Query: 277 LQNLSMLQSIKLDSCQVTCYGLKAIGNWCISLRELS 170 L+ LSMLQS+KLD C VT GL AIGNWCI+L ELS Sbjct: 303 LKRLSMLQSVKLDGCAVTSAGLTAIGNWCITLSELS 338 >ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus communis] gi|223534001|gb|EEF35723.1| F-box protein, atfbl3, putative [Ricinus communis] Length = 669 Score = 61.2 bits (147), Expect(2) = 2e-18 Identities = 29/38 (76%), Positives = 33/38 (86%) Frame = -3 Query: 170 LSKCM*VIDEGLSSLVTTNKDLRKLDITCCRKITHISI 57 LSKC+ V DEGLS LVT ++DLRKLDITCCRKIT +SI Sbjct: 340 LSKCVGVTDEGLSCLVTKHRDLRKLDITCCRKITDVSI 377 Score = 58.2 bits (139), Expect(2) = 2e-18 Identities = 25/36 (69%), Positives = 31/36 (86%) Frame = -1 Query: 277 LQNLSMLQSIKLDSCQVTCYGLKAIGNWCISLRELS 170 L+ LS+LQS+KLD C +T GLKA+GNWCISL+ELS Sbjct: 304 LKQLSVLQSVKLDGCMITSAGLKALGNWCISLKELS 339 >ref|XP_002265215.1| PREDICTED: F-box/LRR-repeat protein 3 [Vitis vinifera] gi|297735597|emb|CBI18091.3| unnamed protein product [Vitis vinifera] Length = 663 Score = 62.4 bits (150), Expect(2) = 8e-17 Identities = 29/43 (67%), Positives = 35/43 (81%) Frame = -3 Query: 170 LSKCM*VIDEGLSSLVTTNKDLRKLDITCCRKITHISIFCVHN 42 LSKC+ V DEGLSSLV ++DLRKLD+TCCRKIT +SI + N Sbjct: 335 LSKCLGVTDEGLSSLVMKHRDLRKLDVTCCRKITQVSIAYITN 377 Score = 51.2 bits (121), Expect(2) = 8e-17 Identities = 26/36 (72%), Positives = 28/36 (77%) Frame = -1 Query: 277 LQNLSMLQSIKLDSCQVTCYGLKAIGNWCISLRELS 170 LQ+LSMLQSIKLD C VT GLK IGN C LRE+S Sbjct: 299 LQDLSMLQSIKLDGCAVTYAGLKGIGNSCALLREVS 334 >ref|XP_003516411.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max] Length = 671 Score = 60.5 bits (145), Expect(2) = 1e-16 Identities = 29/43 (67%), Positives = 34/43 (79%) Frame = -3 Query: 170 LSKCM*VIDEGLSSLVTTNKDLRKLDITCCRKITHISIFCVHN 42 LSKC+ V DE LS LV+ +KDLRKLDITCCRKIT +SI + N Sbjct: 342 LSKCLGVTDEALSFLVSKHKDLRKLDITCCRKITDVSIASISN 384 Score = 52.8 bits (125), Expect(2) = 1e-16 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = -1 Query: 277 LQNLSMLQSIKLDSCQVTCYGLKAIGNWCISLRELS 170 L LSMLQSI LD C VT GL+AIGN CISLRELS Sbjct: 306 LNKLSMLQSIVLDGCPVTSEGLRAIGNLCISLRELS 341