BLASTX nr result

ID: Panax21_contig00013480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013480
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15...   171   4e-40
emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]   171   4e-40
ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|2...   166   8e-39
ref|XP_004141478.1| PREDICTED: F-box/kelch-repeat protein At5g15...   163   9e-38
ref|XP_004156221.1| PREDICTED: F-box/kelch-repeat protein At5g15...   162   1e-37

>ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15710 [Vitis vinifera]
           gi|298204433|emb|CBI16913.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  171 bits (432), Expect = 4e-40
 Identities = 88/121 (72%), Positives = 100/121 (82%)
 Frame = -2

Query: 626 MVGTGEASDFGSRELNSQLVRSGSFREEDGFHRTVTHFGGGGSRNTSPLSRIGSRNTSPS 447
           M G G +S+ GS E+  QL R+G +REE+   + V+  GGGGSRNTSPL R+GSRNTSPS
Sbjct: 1   MDGIGGSSESGSGEIGPQLSRNGFYREEESCVKHVSALGGGGSRNTSPLGRVGSRNTSPS 60

Query: 446 RQKVIKTKPRGLDEETLATFGKAVHPDVQMEDNIWAMLPENLLNEILARVPPLMIFRLRS 267
           RQKVIKT PRGLDEET+ TFGKAV PDVQMEDNIWAMLPE+LL EILARVPP MIFRLRS
Sbjct: 61  RQKVIKT-PRGLDEETVTTFGKAVQPDVQMEDNIWAMLPEDLLIEILARVPPFMIFRLRS 119

Query: 266 L 264
           +
Sbjct: 120 V 120


>emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]
          Length = 437

 Score =  171 bits (432), Expect = 4e-40
 Identities = 88/121 (72%), Positives = 100/121 (82%)
 Frame = -2

Query: 626 MVGTGEASDFGSRELNSQLVRSGSFREEDGFHRTVTHFGGGGSRNTSPLSRIGSRNTSPS 447
           M G G +S+ GS E+  QL R+G +REE+   + V+  GGGGSRNTSPL R+GSRNTSPS
Sbjct: 1   MDGIGGSSESGSGEIGPQLSRNGFYREEESCVKHVSALGGGGSRNTSPLGRVGSRNTSPS 60

Query: 446 RQKVIKTKPRGLDEETLATFGKAVHPDVQMEDNIWAMLPENLLNEILARVPPLMIFRLRS 267
           RQKVIKT PRGLDEET+ TFGKAV PDVQMEDNIWAMLPE+LL EILARVPP MIFRLRS
Sbjct: 61  RQKVIKT-PRGLDEETVTTFGKAVQPDVQMEDNIWAMLPEDLLIEILARVPPFMIFRLRS 119

Query: 266 L 264
           +
Sbjct: 120 V 120


>ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|222873156|gb|EEF10287.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  166 bits (421), Expect = 8e-39
 Identities = 82/117 (70%), Positives = 96/117 (82%)
 Frame = -2

Query: 614 GEASDFGSRELNSQLVRSGSFREEDGFHRTVTHFGGGGSRNTSPLSRIGSRNTSPSRQKV 435
           GE+S+ GS   N+  +++G   ++DG  R V+    GGSRNTSP+  +GSRNTSPSRQKV
Sbjct: 6   GESSESGSIVSNAHSLKNGGLHDDDGCPRQVSPIRIGGSRNTSPIGCVGSRNTSPSRQKV 65

Query: 434 IKTKPRGLDEETLATFGKAVHPDVQMEDNIWAMLPENLLNEILARVPPLMIFRLRSL 264
           IKTKPRGLDEET+ATFGK VHPDVQMEDNIWAMLPE+LLNEIL RVPP MIFRLRS+
Sbjct: 66  IKTKPRGLDEETVATFGKVVHPDVQMEDNIWAMLPEDLLNEILLRVPPFMIFRLRSV 122


>ref|XP_004141478.1| PREDICTED: F-box/kelch-repeat protein At5g15710-like [Cucumis
           sativus]
          Length = 437

 Score =  163 bits (412), Expect = 9e-38
 Identities = 85/121 (70%), Positives = 97/121 (80%)
 Frame = -2

Query: 626 MVGTGEASDFGSRELNSQLVRSGSFREEDGFHRTVTHFGGGGSRNTSPLSRIGSRNTSPS 447
           M G GE+S  GS  ++SQ + SG  RE++     V+   GGG RNTSPL R GSRNTSPS
Sbjct: 1   MDGIGESSQSGSGVVDSQSLGSGVVREDNMVAEQVSPLRGGG-RNTSPLGRAGSRNTSPS 59

Query: 446 RQKVIKTKPRGLDEETLATFGKAVHPDVQMEDNIWAMLPENLLNEILARVPPLMIFRLRS 267
           RQKVIKTKPRGLDEET+ TFGKA HPDVQMED+IWAMLPE+LLNEILARVPP +IFRLRS
Sbjct: 60  RQKVIKTKPRGLDEETVTTFGKAAHPDVQMEDSIWAMLPEDLLNEILARVPPFLIFRLRS 119

Query: 266 L 264
           +
Sbjct: 120 V 120


>ref|XP_004156221.1| PREDICTED: F-box/kelch-repeat protein At5g15710-like [Cucumis
           sativus]
          Length = 437

 Score =  162 bits (411), Expect = 1e-37
 Identities = 84/121 (69%), Positives = 97/121 (80%)
 Frame = -2

Query: 626 MVGTGEASDFGSRELNSQLVRSGSFREEDGFHRTVTHFGGGGSRNTSPLSRIGSRNTSPS 447
           M G GE+S  GS  ++SQ + SG  RE++     V+   GGG RNTSPL R GSRNTSPS
Sbjct: 1   MGGIGESSQSGSGVVDSQSLGSGVVREDNMVAEQVSPLRGGG-RNTSPLGRAGSRNTSPS 59

Query: 446 RQKVIKTKPRGLDEETLATFGKAVHPDVQMEDNIWAMLPENLLNEILARVPPLMIFRLRS 267
           RQKV+KTKPRGLDEET+ TFGKA HPDVQMED+IWAMLPE+LLNEILARVPP +IFRLRS
Sbjct: 60  RQKVVKTKPRGLDEETVTTFGKAAHPDVQMEDSIWAMLPEDLLNEILARVPPFLIFRLRS 119

Query: 266 L 264
           +
Sbjct: 120 V 120


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