BLASTX nr result

ID: Panax21_contig00013476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013476
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269948.1| PREDICTED: uncharacterized protein LOC100243...    58   9e-07
ref|XP_002648999.1| Hypothetical protein CBG21336 [Caenorhabditi...    54   1e-05
ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853...    54   1e-05

>ref|XP_002269948.1| PREDICTED: uncharacterized protein LOC100243925 [Vitis vinifera]
          Length = 396

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/54 (50%), Positives = 36/54 (66%)
 Frame = -1

Query: 392 RDPLPSYRPNYIQGQRGNSYPQRQRGFPPVEQQTNHVPPEQKDFGVGNRNYAPQ 231
           RD +P Y+ NY QGQ+GN +PQ +R F    Q+ N+ PP+Q+D    NRNY PQ
Sbjct: 280 RDTMPPYQGNYNQGQQGNYHPQERRDFSQGAQR-NYAPPDQRDVRGDNRNYNPQ 332


>ref|XP_002648999.1| Hypothetical protein CBG21336 [Caenorhabditis briggsae]
          Length = 238

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = -3

Query: 228 WRFWATSGWEF---WARHRREFWAR*GQKLWAR*GRKFWA--RSGWKLQSRIWRILWARS 64
           W  W  S W +   W R  R +W     + W R  R +W   RS W+     WR  W RS
Sbjct: 90  WWRWNRSWWRWNRSWWRWNRSWWR--WNRSWWRWNRSWWRWNRSWWRWNQSWWR--WNRS 145

Query: 63  WWKLWARGWWKFLARSWRKF 4
           WW+ W R WW+ L R W ++
Sbjct: 146 WWR-WNRSWWR-LNRRWSRW 163


>ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853570 [Vitis vinifera]
          Length = 421

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/85 (36%), Positives = 36/85 (42%)
 Frame = -3

Query: 264 FWSRQ*ELCSTRWRFWATSGWEFWARHRREFWAR*GQKLWAR*GRKFWARSGWKLQSRIW 85
           +W R       RWR W  + W  W   RR  W R     W R GR +  R  W+   R W
Sbjct: 113 WWPRWRTWWWPRWRTWWRTWWWTWWWPRRWRWWR-TWWWWRRKGRWWRRRPAWRW--RRW 169

Query: 84  RILWARSWWKLWARGWWKFLARSWR 10
           R  W   WW  W R WW    R+WR
Sbjct: 170 RTWW---WWWSWRRAWWWSWRRAWR 191


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