BLASTX nr result

ID: Panax21_contig00013474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013474
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263...    80   2e-13
emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]    80   2e-13
ref|XP_002316275.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002531574.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|XP_002311177.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263265 [Vitis vinifera]
          Length = 83

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/71 (57%), Positives = 44/71 (61%)
 Frame = +3

Query: 150 QFYLDEKWKLXXXXXXXXXXXXXXXXXXXXXXXXXXNHRRCAFTRKCASLVKEQRARFYI 329
           QFYLDEKWKL                          + RRC+FTRKCASLVKEQRARFYI
Sbjct: 14  QFYLDEKWKLSKKEGSRSRSSTSPLMRNS-------SQRRCSFTRKCASLVKEQRARFYI 66

Query: 330 MRRCVTMLICW 362
           +RRCVTMLICW
Sbjct: 67  VRRCVTMLICW 77


>emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]
          Length = 82

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/71 (57%), Positives = 44/71 (61%)
 Frame = +3

Query: 150 QFYLDEKWKLXXXXXXXXXXXXXXXXXXXXXXXXXXNHRRCAFTRKCASLVKEQRARFYI 329
           QFYLDEKWKL                          + RRC+FTRKCASLVKEQRARFYI
Sbjct: 13  QFYLDEKWKLSKKEGSRSRSSTSPLMRNS-------SQRRCSFTRKCASLVKEQRARFYI 65

Query: 330 MRRCVTMLICW 362
           +RRCVTMLICW
Sbjct: 66  VRRCVTMLICW 76


>ref|XP_002316275.1| predicted protein [Populus trichocarpa] gi|222865315|gb|EEF02446.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/74 (54%), Positives = 44/74 (59%)
 Frame = +3

Query: 141 QPQQFYLDEKWKLXXXXXXXXXXXXXXXXXXXXXXXXXXNHRRCAFTRKCASLVKEQRAR 320
           +P QFY DEKWKL                          + RRC+FTRKCA LVKEQRAR
Sbjct: 11  EPPQFYFDEKWKLSKKEGSSRSRSSTSSLMKDS------SQRRCSFTRKCARLVKEQRAR 64

Query: 321 FYIMRRCVTMLICW 362
           FYI+RRCVTMLICW
Sbjct: 65  FYIVRRCVTMLICW 78


>ref|XP_002531574.1| conserved hypothetical protein [Ricinus communis]
           gi|223528804|gb|EEF30810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/73 (54%), Positives = 43/73 (58%)
 Frame = +3

Query: 144 PQQFYLDEKWKLXXXXXXXXXXXXXXXXXXXXXXXXXXNHRRCAFTRKCASLVKEQRARF 323
           P QFY DEKWKL                          + RRC+FTRKCA LVKEQRARF
Sbjct: 12  PPQFYFDEKWKLSKKEGSSRSVRSSTSPLMKNSSSS--SQRRCSFTRKCARLVKEQRARF 69

Query: 324 YIMRRCVTMLICW 362
           YI+RRCVTMLICW
Sbjct: 70  YIVRRCVTMLICW 82


>ref|XP_002311177.1| predicted protein [Populus trichocarpa] gi|222850997|gb|EEE88544.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/73 (53%), Positives = 41/73 (56%)
 Frame = +3

Query: 144 PQQFYLDEKWKLXXXXXXXXXXXXXXXXXXXXXXXXXXNHRRCAFTRKCASLVKEQRARF 323
           P Q Y DEKWKL                          + RRC+FTRKCA LVKEQRARF
Sbjct: 12  PPQLYFDEKWKLTKKEGSSRSRSSTSSLMKNS------SQRRCSFTRKCARLVKEQRARF 65

Query: 324 YIMRRCVTMLICW 362
           YIMRRCV MLICW
Sbjct: 66  YIMRRCVAMLICW 78


Top