BLASTX nr result

ID: Panax21_contig00013470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013470
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof...   115   3e-24
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...   115   3e-24
emb|CBI28651.3| unnamed protein product [Vitis vinifera]              115   3e-24
emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]   115   3e-24
ref|XP_002522017.1| Translational activator GCN1, putative [Rici...   115   4e-24

>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
          Length = 2461

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/80 (78%), Positives = 67/80 (83%)
 Frame = +3

Query: 237  RLQLKFSTLEVHEFAGLAFSTLYKSIRMQAIDEIVPTLLHALENDQMSDTALDGLKQILS 416
            R  L  ST EV E AGLAFSTLYKS  MQAIDEIVPTLLH+LE+DQ SDTALDGLKQILS
Sbjct: 1803 RTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILS 1862

Query: 417  VRTTTVLMHILPELVQLPLS 476
            VRTT VL HILP+LV LPL+
Sbjct: 1863 VRTTAVLPHILPKLVHLPLT 1882


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/80 (78%), Positives = 67/80 (83%)
 Frame = +3

Query: 237  RLQLKFSTLEVHEFAGLAFSTLYKSIRMQAIDEIVPTLLHALENDQMSDTALDGLKQILS 416
            R  L  ST EV E AGLAFSTLYKS  MQAIDEIVPTLLH+LE+DQ SDTALDGLKQILS
Sbjct: 1955 RTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILS 2014

Query: 417  VRTTTVLMHILPELVQLPLS 476
            VRTT VL HILP+LV LPL+
Sbjct: 2015 VRTTAVLPHILPKLVHLPLT 2034


>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
          Length = 2636

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/80 (78%), Positives = 67/80 (83%)
 Frame = +3

Query: 237  RLQLKFSTLEVHEFAGLAFSTLYKSIRMQAIDEIVPTLLHALENDQMSDTALDGLKQILS 416
            R  L  ST EV E AGLAFSTLYKS  MQAIDEIVPTLLH+LE+DQ SDTALDGLKQILS
Sbjct: 1978 RTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILS 2037

Query: 417  VRTTTVLMHILPELVQLPLS 476
            VRTT VL HILP+LV LPL+
Sbjct: 2038 VRTTAVLPHILPKLVHLPLT 2057


>emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]
          Length = 720

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/80 (78%), Positives = 67/80 (83%)
 Frame = +3

Query: 237 RLQLKFSTLEVHEFAGLAFSTLYKSIRMQAIDEIVPTLLHALENDQMSDTALDGLKQILS 416
           R  L  ST EV E AGLAFSTLYKS  MQAIDEIVPTLLH+LE+DQ SDTALDGLKQILS
Sbjct: 62  RTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILS 121

Query: 417 VRTTTVLMHILPELVQLPLS 476
           VRTT VL HILP+LV LPL+
Sbjct: 122 VRTTAVLPHILPKLVHLPLT 141


>ref|XP_002522017.1| Translational activator GCN1, putative [Ricinus communis]
            gi|223538821|gb|EEF40421.1| Translational activator GCN1,
            putative [Ricinus communis]
          Length = 2459

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/80 (78%), Positives = 66/80 (82%)
 Frame = +3

Query: 237  RLQLKFSTLEVHEFAGLAFSTLYKSIRMQAIDEIVPTLLHALENDQMSDTALDGLKQILS 416
            R  L  S LEV E AGLAFSTLYKS  MQAIDEIVPTLLHALE+D+ SDTALDGLKQILS
Sbjct: 1801 RTALCDSMLEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHALEDDETSDTALDGLKQILS 1860

Query: 417  VRTTTVLMHILPELVQLPLS 476
            VRT  VL HILP+LV LPLS
Sbjct: 1861 VRTAAVLPHILPKLVHLPLS 1880


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