BLASTX nr result

ID: Panax21_contig00013435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013435
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containin...   253   3e-65
ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containin...   202   7e-50
ref|XP_002515733.1| conserved hypothetical protein [Ricinus comm...   202   9e-50
ref|XP_002309834.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_003526333.1| PREDICTED: zinc finger CCCH domain-containin...   177   2e-42

>ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containing protein 13 [Vitis
           vinifera] gi|297739310|emb|CBI28961.3| unnamed protein
           product [Vitis vinifera]
          Length = 444

 Score =  253 bits (646), Expect = 3e-65
 Identities = 126/205 (61%), Positives = 155/205 (75%), Gaps = 3/205 (1%)
 Frame = +1

Query: 169 MVERKLFKTKLCQLFKKGHCPRQTCSFAHGDAELRRFSKPFNGRHDYRGGDLRDNIGRRR 348
           MVERKL+KTKLC L+++GHCPRQTCSFAHGDAELR FS  FNGR DYR  DLRD + RR 
Sbjct: 1   MVERKLYKTKLCVLYERGHCPRQTCSFAHGDAELRGFSGSFNGRRDYRDDDLRDKLDRRH 60

Query: 349 SPVHRYSPGRDARVRRISQGYSPSRSL---EXXXXXXXXXLDSQSDFSGSLKFSNGEEHE 519
           SP  RYSPGR AR R +  GYSPSRS+             LD QSDFSGSL+ S+G +  
Sbjct: 61  SPPRRYSPGRGARSRPVIHGYSPSRSVGKKSDRKHRRKQQLDGQSDFSGSLRISDGTDDR 120

Query: 520 VKDMKTTSSDSKDILDEQLRHVQSEIDLLEEHKTQLKIYLEERLQEADTLTSRTQELEIQ 699
           +K+ K   S SK++L EQL+ VQ +ID L++HK+QLK Y+EER+QEAD+LTSR QELE Q
Sbjct: 121 LKEGKLAPSGSKNVLGEQLKQVQLDIDRLDDHKSQLKTYMEERVQEADSLTSRIQELESQ 180

Query: 700 LCKEKDECKRIVSKTKKFIKAYNRH 774
           L KE+++CKRI SK KKF+KA++R+
Sbjct: 181 LYKEREDCKRITSKIKKFVKAHSRY 205


>ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Glycine max]
          Length = 417

 Score =  202 bits (514), Expect = 7e-50
 Identities = 104/206 (50%), Positives = 138/206 (66%), Gaps = 3/206 (1%)
 Frame = +1

Query: 169 MVERKLFKTKLCQLFKKGHCPRQTCSFAHGDAELRRFSKPFNGRHDYRGGDLRDNIGRRR 348
           MVERK FKTKLC L+++G C R  CSFAHG A+LRRFS  ++GR DY G DLRD + RR 
Sbjct: 1   MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSADLRRFSASYSGRRDYLGNDLRDKLDRRY 60

Query: 349 SPVHRYSPGRDARVRRISQGYSPSRSLE---XXXXXXXXXLDSQSDFSGSLKFSNGEEHE 519
               RYSP  D R R+I + YSP+ SLE             + QSD SG+LK S+  + +
Sbjct: 61  VSPRRYSPAPDTRGRQIIREYSPTMSLEKKSDRRHRRKQDTNGQSDISGNLKVSDRVQGQ 120

Query: 520 VKDMKTTSSDSKDILDEQLRHVQSEIDLLEEHKTQLKIYLEERLQEADTLTSRTQELEIQ 699
           VK+ K  SS S++ L+EQL+ V S+I  L+  K QL++YL+E +QE D+L SR +ELE Q
Sbjct: 121 VKEGKLLSSGSRNNLEEQLKKVDSDISTLQNRKFQLEVYLDESVQEVDSLNSRIRELEAQ 180

Query: 700 LCKEKDECKRIVSKTKKFIKAYNRHS 777
           LCKE +ECKRI S+ +KF++ +N  S
Sbjct: 181 LCKEDEECKRITSRIRKFVRVHNHMS 206


>ref|XP_002515733.1| conserved hypothetical protein [Ricinus communis]
           gi|223545170|gb|EEF46680.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 448

 Score =  202 bits (513), Expect = 9e-50
 Identities = 104/205 (50%), Positives = 143/205 (69%), Gaps = 3/205 (1%)
 Frame = +1

Query: 169 MVERKLFKTKLCQLFKKGHCPRQTCSFAHGDAELRRFSKPFNGRHDYRGGDLRDNIGRRR 348
           M E KLFKT+LC L++KGHC R  CSFAHG+A+LR+    +N + D R GDLRD +  + 
Sbjct: 1   MGEGKLFKTRLCALYQKGHCHRHNCSFAHGNADLRQSFASYNDKQDRRSGDLRDKLDMKF 60

Query: 349 SPVHRYSPGRDARVRRISQGYSPSRSLE---XXXXXXXXXLDSQSDFSGSLKFSNGEEHE 519
           SP  +YSP +D R +R  +G SPSRSLE             D QSDFSGSLK S+G   +
Sbjct: 61  SPRRKYSPAKDTRGQRRFRGSSPSRSLERNSDRKRRRKPHFDGQSDFSGSLKSSDGAGDQ 120

Query: 520 VKDMKTTSSDSKDILDEQLRHVQSEIDLLEEHKTQLKIYLEERLQEADTLTSRTQELEIQ 699
           VK  K T +DS+ +L EQL+ V++EI +LE+ K+QL+I ++E+++EAD L+SR +EL+ Q
Sbjct: 121 VKRRKNT-ADSRVVLKEQLKEVRTEISMLEQQKSQLRILVQEKIEEADILSSRIRELDSQ 179

Query: 700 LCKEKDECKRIVSKTKKFIKAYNRH 774
           L KEK+ECKR +SK KKF+KA+  +
Sbjct: 180 LSKEKEECKRTISKIKKFVKAHKHY 204


>ref|XP_002309834.1| predicted protein [Populus trichocarpa] gi|222852737|gb|EEE90284.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  201 bits (512), Expect = 1e-49
 Identities = 109/203 (53%), Positives = 135/203 (66%), Gaps = 1/203 (0%)
 Frame = +1

Query: 169 MVERKLFKTKLCQLFKKGHCPRQTCSFAHGDAELRRFSKPFNGRHDYRGGDLRDNIGRRR 348
           M ERKLFKTKLC L++KG C RQ CSFAHG+AELR+      G  DYRGGDLRD + +R 
Sbjct: 1   MAERKLFKTKLCVLYRKGRCHRQNCSFAHGNAELRQSMPSRYGTRDYRGGDLRDKLDQRL 60

Query: 349 SPVHRYSPGRDARVRRISQGYSPSRSLE-XXXXXXXXXLDSQSDFSGSLKFSNGEEHEVK 525
           SP  +YSPG+DA  R   +G SPSRSLE           D QSDFSGSLK S+  + +VK
Sbjct: 61  SPKRQYSPGKDANRRDSFRGSSPSRSLEKSKKRRKKQQYDGQSDFSGSLKVSDRADDQVK 120

Query: 526 DMKTTSSDSKDILDEQLRHVQSEIDLLEEHKTQLKIYLEERLQEADTLTSRTQELEIQLC 705
           + K  SS        +L+ +QS I+ LE HK++L I LE++ +EAD+L SR QELE QL 
Sbjct: 121 ERKGASS--------ELKEMQSNINKLEHHKSELMILLEKKTEEADSLISRIQELEAQLS 172

Query: 706 KEKDECKRIVSKTKKFIKAYNRH 774
            EK+ECKRI S  KKF+KAY  +
Sbjct: 173 AEKEECKRITSNIKKFVKAYKHY 195


>ref|XP_003526333.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Glycine max]
          Length = 399

 Score =  177 bits (449), Expect = 2e-42
 Identities = 98/204 (48%), Positives = 129/204 (63%), Gaps = 9/204 (4%)
 Frame = +1

Query: 169 MVERKLFKTKLCQLFKKGHCPRQTCSFAHGDAELRRFSKPFNGRHDYRGGDLRDNIGRRR 348
           MVERK FKTKLC L+++G C R  CSFAHG AELRRFS  ++GR DY   DLRD + RR 
Sbjct: 1   MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSAELRRFSASYSGRRDYLDNDLRDKLDRRH 60

Query: 349 SPVHRYSPGRDARVRRISQGYSPSRSLE---XXXXXXXXXLDSQSDFSGSLKFSNGEEHE 519
               RYSP  D R R+I + YSP+RSLE            +  QSD SG+LK S+  +  
Sbjct: 61  VSPRRYSPTPDTRGRQIIREYSPTRSLEKKSDRRYRRKQDITGQSDVSGNLKVSDRVQDR 120

Query: 520 VKDMKTTSSDSKDILDEQLRHVQSEIDLLEEHKTQ------LKIYLEERLQEADTLTSRT 681
           VK+ K  SS S++ L+E+L+ V S+I  L+  K Q      LK++L+E +QE D+L SR 
Sbjct: 121 VKEGKLLSSGSRNNLEEKLKKVDSDISTLQNRKFQLEKCIFLKVFLDENVQEVDSLNSRI 180

Query: 682 QELEIQLCKEKDECKRIVSKTKKF 753
           +ELE QL KE +ECKR   + ++F
Sbjct: 181 RELEGQLSKEDEECKRSQVRLQRF 204


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