BLASTX nr result

ID: Panax21_contig00013420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013420
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]           75   6e-12
sp|P93568.1|SSY1_SOLTU RecName: Full=Soluble starch synthase 1, ...    74   1e-11
ref|XP_002277372.1| PREDICTED: soluble starch synthase, chloropl...    64   1e-08
emb|CBI23015.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|222868992|gb|EEF06123.1|
           predicted protein [Populus trichocarpa]
          Length = 649

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
 Frame = -1

Query: 366 DTPPLNLSSIRQLGFPYLSRQKRKCSSIRPLTLSIIRTSIGSPDGSSSTVEDDKED---- 199
           DT  +      QLGF    R++ K  ++  +     R+ +G+    +  VE++K++    
Sbjct: 22  DTTRVGFRPRAQLGFGCFVRERYKYGNL--VIARSGRSEVGNSKDGNFAVENEKKEKRGG 79

Query: 198 VLLGPERDGLGSVVGFHLIPQS--DSKNKIVGSHDQVASEKEQVTEDTEGGEKLTIRVTY 25
           ++LGPERD  GS++GF+LIP S  D    ++ SH+   +   +  ED EG EK+  RVTY
Sbjct: 80  LILGPERDSSGSIIGFNLIPPSGMDISFTVLESHEDATTGGTEEAEDIEGVEKVQTRVTY 139

Query: 24  NIVLVTSE 1
           NIV VTSE
Sbjct: 140 NIVFVTSE 147


>gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]
          Length = 633

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 49/118 (41%), Positives = 71/118 (60%)
 Frame = -1

Query: 354 LNLSSIRQLGFPYLSRQKRKCSSIRPLTLSIIRTSIGSPDGSSSTVEDDKEDVLLGPERD 175
           L  S I+QLGF YL  ++ K +S     L++ R+ IG     SS  ED+++  +LG ERD
Sbjct: 23  LCFSPIKQLGFVYLCGERCKRAS-----LTLGRSEIGGL--GSSRDEDEEKSHILGAERD 75

Query: 174 GLGSVVGFHLIPQSDSKNKIVGSHDQVASEKEQVTEDTEGGEKLTIRVTYNIVLVTSE 1
             GS++GF+LI QS      + SH+ VA+E  + TE+TEG E+  +R   NIV V +E
Sbjct: 76  DSGSIIGFNLISQSGDGG--IESHEDVATEIAEETENTEGREEAQVRERLNIVFVAAE 131


>sp|P93568.1|SSY1_SOLTU RecName: Full=Soluble starch synthase 1,
           chloroplastic/amyloplastic; AltName: Full=Soluble starch
           synthase I; Short=SS I; Flags: Precursor
           gi|1781353|emb|CAA71442.1| soluble starch (bacterial
           glycogen) synthase [Solanum tuberosum]
          Length = 641

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
 Frame = -1

Query: 330 LGFPYL--SRQKRKCSSIRPLTLSIIRTSIGSPDGSSSTVEDD-KEDVLLGPERDGLGSV 160
           LGF +L   R+ RK  S+       + +S+   DGSS     +  E +LLG ERDG GSV
Sbjct: 34  LGFSWLLKGRRNRKVQSL------CVTSSVS--DGSSIAENKNVSEGLLLGAERDGSGSV 85

Query: 159 VGFHLIPQSDSKNK-IVGSHDQVASEKEQVTEDTEGGEKLTIRVTYNIVLVTSE 1
           VGF LIP S + +  +V SHD VA++++ ++EDTE  E+  I++T+NI+ VT+E
Sbjct: 86  VGFQLIPHSVAGDATMVESHDIVANDRDDLSEDTEEMEETPIKLTFNIIFVTAE 139


>ref|XP_002277372.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like
           [Vitis vinifera]
          Length = 633

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/113 (30%), Positives = 62/113 (54%)
 Frame = -1

Query: 339 IRQLGFPYLSRQKRKCSSIRPLTLSIIRTSIGSPDGSSSTVEDDKEDVLLGPERDGLGSV 160
           + ++GF    +Q+R   S+  +  S++  S     G S   +D    +L+  ++      
Sbjct: 23  VLEVGFACFFKQRRVIQSVS-IKRSVVCCSRKGGGGGS---QDGSSAMLVNTDKKDASDS 78

Query: 159 VGFHLIPQSDSKNKIVGSHDQVASEKEQVTEDTEGGEKLTIRVTYNIVLVTSE 1
           VGFHL+P     N ++  H++++++KE  T ++EG E+   +VTYNIV VTSE
Sbjct: 79  VGFHLVPPPSGDNGVIDPHEKLSTQKEAETGNSEGEEERKTKVTYNIVFVTSE 131


>emb|CBI23015.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/66 (37%), Positives = 42/66 (63%)
 Frame = -1

Query: 198 VLLGPERDGLGSVVGFHLIPQSDSKNKIVGSHDQVASEKEQVTEDTEGGEKLTIRVTYNI 19
           +L+  ++      VGFHL+P     N ++  H++++++KE  T ++EG E+   +VTYNI
Sbjct: 1   MLVNTDKKDASDSVGFHLVPPPSGDNGVIDPHEKLSTQKEAETGNSEGEEERKTKVTYNI 60

Query: 18  VLVTSE 1
           V VTSE
Sbjct: 61  VFVTSE 66


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