BLASTX nr result

ID: Panax21_contig00013412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013412
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis ...   144   2e-32
emb|CBI31221.3| unnamed protein product [Vitis vinifera]              144   2e-32
emb|CAN74351.1| hypothetical protein VITISV_038575 [Vitis vinifera]   130   3e-28
ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycin...   107   2e-21

>ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
          Length = 931

 Score =  144 bits (363), Expect = 2e-32
 Identities = 102/255 (40%), Positives = 144/255 (56%), Gaps = 14/255 (5%)
 Frame = -3

Query: 736  EAIAEHLREERMETTSAGNLVVADGSEVL---SPPDVLARSKAA----TGAELGSGSYEK 578
            EA A+HL+E  + T S  N V   G E L   SP  + A    A    T   +  G  +K
Sbjct: 545  EAAAQHLKEGHIGTASEDNTVDTTGFEALPSESPTSIRAADARAESFDTDNVINGGKTDK 604

Query: 577  NVKLFKHLPVPVKLKEKFLELGNSTNEVGRNQHGESSVNPGDNRNYVQDEKDGYVPALPQ 398
                   L   V  KE  +E G++ +  G    G SS  PG+++  V+DEKD ++P + +
Sbjct: 605  -------LQTFVSAKEYHMEPGSTIDGPGSKGQGGSSEPPGESKE-VKDEKDSFIPEVAR 656

Query: 397  QSFAMSKQSRVGNINFLYPVSG--AEATIQVLKKPNRAFGALLGNSAAKRKFDPGRKEKE 224
            ++ A S QSR  + +     S    E T+Q+LKKPNRAFG+LLGNSA+KRK +   K KE
Sbjct: 657  ETPASSGQSRDTDTHTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRKLNSDPKGKE 716

Query: 223  EAKLEQIKSSVNLPFHSFLG----EVDKVQAVVKEAVKPLEILHHEEPAVVLATNSHVEE 56
            + KLEQIKSSVNLPFHSF G    E+ K+    +E  K LE    EEP  V A+ + +EE
Sbjct: 717  DIKLEQIKSSVNLPFHSFSGGNREELSKLD--TEEHTKVLETQGSEEPLAVPASRNDLEE 774

Query: 55   VILLKDDS-DEEAIN 14
            +I+ +++S  +E++N
Sbjct: 775  IIMFEENSGSDESVN 789


>emb|CBI31221.3| unnamed protein product [Vitis vinifera]
          Length = 901

 Score =  144 bits (363), Expect = 2e-32
 Identities = 102/255 (40%), Positives = 144/255 (56%), Gaps = 14/255 (5%)
 Frame = -3

Query: 736  EAIAEHLREERMETTSAGNLVVADGSEVL---SPPDVLARSKAA----TGAELGSGSYEK 578
            EA A+HL+E  + T S  N V   G E L   SP  + A    A    T   +  G  +K
Sbjct: 515  EAAAQHLKEGHIGTASEDNTVDTTGFEALPSESPTSIRAADARAESFDTDNVINGGKTDK 574

Query: 577  NVKLFKHLPVPVKLKEKFLELGNSTNEVGRNQHGESSVNPGDNRNYVQDEKDGYVPALPQ 398
                   L   V  KE  +E G++ +  G    G SS  PG+++  V+DEKD ++P + +
Sbjct: 575  -------LQTFVSAKEYHMEPGSTIDGPGSKGQGGSSEPPGESKE-VKDEKDSFIPEVAR 626

Query: 397  QSFAMSKQSRVGNINFLYPVSG--AEATIQVLKKPNRAFGALLGNSAAKRKFDPGRKEKE 224
            ++ A S QSR  + +     S    E T+Q+LKKPNRAFG+LLGNSA+KRK +   K KE
Sbjct: 627  ETPASSGQSRDTDTHTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRKLNSDPKGKE 686

Query: 223  EAKLEQIKSSVNLPFHSFLG----EVDKVQAVVKEAVKPLEILHHEEPAVVLATNSHVEE 56
            + KLEQIKSSVNLPFHSF G    E+ K+    +E  K LE    EEP  V A+ + +EE
Sbjct: 687  DIKLEQIKSSVNLPFHSFSGGNREELSKLD--TEEHTKVLETQGSEEPLAVPASRNDLEE 744

Query: 55   VILLKDDS-DEEAIN 14
            +I+ +++S  +E++N
Sbjct: 745  IIMFEENSGSDESVN 759


>emb|CAN74351.1| hypothetical protein VITISV_038575 [Vitis vinifera]
          Length = 452

 Score =  130 bits (327), Expect = 3e-28
 Identities = 102/280 (36%), Positives = 144/280 (51%), Gaps = 39/280 (13%)
 Frame = -3

Query: 736 EAIAEHLREERMETTSAGNLVVADGSEVL---SPPDVLARSKAA----TGAELGSGSYEK 578
           EA A+HL+E  + T S  N V   G E L   SP  + A    A    T   +  G  +K
Sbjct: 41  EAAAQHLKEGHIGTASEDNTVDTTGFEALPSESPTSIRAADARAESFDTDNVINGGKTDK 100

Query: 577 NVKLFKHLPVPVKLKEKFLELGNSTNEVGRNQHGESSVNPGDNRNYVQDEKDGYVPALPQ 398
                  L   V  KE  +E G++ +  G    G SS  PG+++  V+DEKD ++P + +
Sbjct: 101 -------LQTFVSAKEYHMEPGSTIDGPGSKGQGGSSEPPGESKE-VKDEKDSFIPEVAR 152

Query: 397 QSFAMSKQSRVGNINFLYPVSG--AEATIQVLKKPNRAFGALLGNSAAKRKFDPGRK--- 233
           ++ A S QSR  + +     S    E T+Q+LKKPNRAFG+LLGNSA+KRK +   K   
Sbjct: 153 ETPASSGQSRDTDTHTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRKLNSDPKVCN 212

Query: 232 ----------------------EKEEAKLEQIKSSVNLPFHSFLG----EVDKVQAVVKE 131
                                  KE+ KLEQIKSSVNLPFHSF G    E+ K+    +E
Sbjct: 213 SDWVSLAQPVKMQDWVEECPLBGKEDIKLEQIKSSVNLPFHSFSGGNREELSKLD--TEE 270

Query: 130 AVKPLEILHHEEPAVVLATNSHVEEVILLKDDS-DEEAIN 14
             K LE    EEP  V A+ + +EE+I+ +++S  +E++N
Sbjct: 271 HTKVLETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVN 310


>ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|222857558|gb|EEE95105.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  114 bits (285), Expect = 2e-23
 Identities = 82/238 (34%), Positives = 107/238 (44%)
 Frame = -3

Query: 736  EAIAEHLREERMETTSAGNLVVADGSEVLSPPDVLARSKAATGAELGSGSYEKNVKLFKH 557
            EA  +HL+E  ME  S       DGSE  S P     +         S   EK +     
Sbjct: 533  EAAVQHLKERHMEIASQEETEANDGSEARSIPGGNGMNSGVAACHETSAQLEKGL----- 587

Query: 556  LPVPVKLKEKFLELGNSTNEVGRNQHGESSVNPGDNRNYVQDEKDGYVPALPQQSFAMSK 377
                       L+ G+S  E+GR   G S+ +                            
Sbjct: 588  -----------LKQGSSIVELGRGGQGSSAKH---------------------------- 608

Query: 376  QSRVGNINFLYPVSGAEATIQVLKKPNRAFGALLGNSAAKRKFDPGRKEKEEAKLEQIKS 197
                             AT+QVLKKP  AFGALLG + AKRK D  +K KE+ KLE+I+S
Sbjct: 609  ----------------HATVQVLKKPTGAFGALLGGAVAKRKLDTDKKVKEKIKLEKIRS 652

Query: 196  SVNLPFHSFLGEVDKVQAVVKEAVKPLEILHHEEPAVVLATNSHVEEVILLKDDSDEE 23
            SVNLPFHSF+G  +  + VV+E +   EI H EE   V AT S ++++ILL +DSD E
Sbjct: 653  SVNLPFHSFMGINEPPKVVVEEPIGVSEISHPEESLDVPATGSSLQDIILLDNDSDME 710


>ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 877

 Score =  107 bits (268), Expect = 2e-21
 Identities = 62/154 (40%), Positives = 90/154 (58%)
 Frame = -3

Query: 484  QHGESSVNPGDNRNYVQDEKDGYVPALPQQSFAMSKQSRVGNINFLYPVSGAEATIQVLK 305
            Q  + S N  D    +  + +      P+ S  ++ Q+R  N+  L    G  AT+QVLK
Sbjct: 587  QDSKESSNHQDTNVPINLKSNSLRSEPPKDSLTIADQNRDANVGALSTTKGNGATVQVLK 646

Query: 304  KPNRAFGALLGNSAAKRKFDPGRKEKEEAKLEQIKSSVNLPFHSFLGEVDKVQAVVKEAV 125
            KP  AFGALLGNSA+KRK  P  K KE++KLEQI+SSV+LPFHSFLG  +K +  V+   
Sbjct: 647  KPTGAFGALLGNSASKRKLGPD-KGKEDSKLEQIRSSVSLPFHSFLGSSEKSEPTVETHT 705

Query: 124  KPLEILHHEEPAVVLATNSHVEEVILLKDDSDEE 23
               E+L  + P   + + S ++E+I+L+  +  E
Sbjct: 706  VASEMLESQRPVSDVVSVSPLDEIIMLESGTGAE 739


Top