BLASTX nr result

ID: Panax21_contig00013411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013411
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis ...    98   6e-19
emb|CBI31221.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communi...    89   4e-16
ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycin...    87   1e-15

>ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
          Length = 931

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 66/167 (39%), Positives = 99/167 (59%), Gaps = 7/167 (4%)
 Frame = -3

Query: 493  GRNQHGESSLNPGNNRNYMQDDKDGYVPVLPQQSFAMSK*SIVGNINFLYPVSG--AEAT 320
            G    G SS  PG ++  ++D+KD ++P + +++ A S  S   + +     S    E T
Sbjct: 626  GSKGQGGSSEPPGESKE-VKDEKDSFIPEVARETPASSGQSRDTDTHTSVSQSEKVTEVT 684

Query: 319  IQVLKKSNSAFGALLGNSTSKRKFDLGRKDKEEAKLEQIKSSVNLPFHLFLA----EVDK 152
            +Q+LKK N AFG+LLGNS SKRK +   K KE+ KLEQIKSSVNLPFH F      E+ K
Sbjct: 685  VQLLKKPNRAFGSLLGNSASKRKLNSDPKGKEDIKLEQIKSSVNLPFHSFSGGNREELSK 744

Query: 151  VQAVVKEAAKPLEILHHEVPAIVLATNSHVKEVILLKDDS-EEEAIN 14
            +    +E  K LE    E P  V A+ + ++E+I+ +++S  +E++N
Sbjct: 745  LD--TEEHTKVLETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVN 789


>emb|CBI31221.3| unnamed protein product [Vitis vinifera]
          Length = 901

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 66/167 (39%), Positives = 99/167 (59%), Gaps = 7/167 (4%)
 Frame = -3

Query: 493  GRNQHGESSLNPGNNRNYMQDDKDGYVPVLPQQSFAMSK*SIVGNINFLYPVSG--AEAT 320
            G    G SS  PG ++  ++D+KD ++P + +++ A S  S   + +     S    E T
Sbjct: 596  GSKGQGGSSEPPGESKE-VKDEKDSFIPEVARETPASSGQSRDTDTHTSVSQSEKVTEVT 654

Query: 319  IQVLKKSNSAFGALLGNSTSKRKFDLGRKDKEEAKLEQIKSSVNLPFHLFLA----EVDK 152
            +Q+LKK N AFG+LLGNS SKRK +   K KE+ KLEQIKSSVNLPFH F      E+ K
Sbjct: 655  VQLLKKPNRAFGSLLGNSASKRKLNSDPKGKEDIKLEQIKSSVNLPFHSFSGGNREELSK 714

Query: 151  VQAVVKEAAKPLEILHHEVPAIVLATNSHVKEVILLKDDS-EEEAIN 14
            +    +E  K LE    E P  V A+ + ++E+I+ +++S  +E++N
Sbjct: 715  LD--TEEHTKVLETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVN 759


>ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|222857558|gb|EEE95105.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = -3

Query: 325 ATIQVLKKSNSAFGALLGNSTSKRKFDLGRKDKEEAKLEQIKSSVNLPFHLFLAEVDKVQ 146
           AT+QVLKK   AFGALLG + +KRK D  +K KE+ KLE+I+SSVNLPFH F+   +  +
Sbjct: 610 ATVQVLKKPTGAFGALLGGAVAKRKLDTDKKVKEKIKLEKIRSSVNLPFHSFMGINEPPK 669

Query: 145 AVVKEAAKPLEILHHEVPAIVLATNSHVKEVILLKDDSEEE 23
            VV+E     EI H E    V AT S ++++ILL +DS+ E
Sbjct: 670 VVVEEPIGVSEISHPEESLDVPATGSSLQDIILLDNDSDME 710


>ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 857

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/113 (44%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
 Frame = -3

Query: 328 EATIQVLKKSNSAFGALLGNSTS-KRKFDLGRKDKEEAKLEQIKSSVNLPFHLFLAEVDK 152
           +AT+QVLKK   AFGALLG S++ KR+FD+ +KDK+E KL++I+SSV+LPFH FL   + 
Sbjct: 614 DATVQVLKKPAGAFGALLGKSSAGKRRFDMAKKDKDEIKLDKIRSSVSLPFHSFLGRKEP 673

Query: 151 VQAVVKEAAKPLEILHHEVPAIVLATNSHVKEVILLKDDSE---EEAINDDPK 2
            +   +E     E    E    V AT S ++++ILL D+S+   +E ++ D K
Sbjct: 674 AKPAAEEPNLVTETPRPEESFAVPATGSSLEDIILLGDNSDVVVQENVDSDTK 726


>ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 877

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/127 (40%), Positives = 74/127 (58%)
 Frame = -3

Query: 403 PQQSFAMSK*SIVGNINFLYPVSGAEATIQVLKKSNSAFGALLGNSTSKRKFDLGRKDKE 224
           P+ S  ++  +   N+  L    G  AT+QVLKK   AFGALLGNS SKRK     K KE
Sbjct: 614 PKDSLTIADQNRDANVGALSTTKGNGATVQVLKKPTGAFGALLGNSASKRKLGPD-KGKE 672

Query: 223 EAKLEQIKSSVNLPFHLFLAEVDKVQAVVKEAAKPLEILHHEVPAIVLATNSHVKEVILL 44
           ++KLEQI+SSV+LPFH FL   +K +  V+      E+L  + P   + + S + E+I+L
Sbjct: 673 DSKLEQIRSSVSLPFHSFLGSSEKSEPTVETHTVASEMLESQRPVSDVVSVSPLDEIIML 732

Query: 43  KDDSEEE 23
           +  +  E
Sbjct: 733 ESGTGAE 739


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