BLASTX nr result

ID: Panax21_contig00013398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013398
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyl...    78   2e-12
ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|22...    68   2e-09
ref|XP_004162952.1| PREDICTED: probable glucuronoxylan glucurono...    67   4e-09
ref|XP_004137584.1| PREDICTED: probable glucuronoxylan glucurono...    67   4e-09
ref|XP_003550781.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...    66   7e-09

>ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase isoform 1
           [Vitis vinifera]
          Length = 498

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 15/100 (15%)
 Frame = -3

Query: 256 DNSFIPTS-FRIIDVNSTSVYLRPNLMSEHT-------------NQTIRSQEVVYQNSNS 119
           + SFIP S F++I VNSTSVY + +  +E T             ++    +E   Q SN+
Sbjct: 35  NTSFIPNSVFKLILVNSTSVYFKSSGKNEQTKLPFVTSVASPVDSKRPMGREGSCQISNA 94

Query: 118 SK-MYALEQDREKVCYPNHSNLRVYMYDLPPEFHFGLMGW 2
           SK M AL Q R K C PN ++LR +MYDLPPEFHFGL+GW
Sbjct: 95  SKKMDALGQGRRKGCDPNQAHLRAFMYDLPPEFHFGLLGW 134


>ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|223546364|gb|EEF47866.1|
           catalytic, putative [Ricinus communis]
          Length = 490

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
 Frame = -3

Query: 250 SFIPTS-FRIIDVNSTSVYLRPNLMSE----------HTNQTIRSQEVVYQNSNSSKMYA 104
           SF+P+S  ++I VNSTS+YL+ N+ +E           +  T  S     +N ++ ++ A
Sbjct: 37  SFLPSSVIKLILVNSTSIYLKSNVKNELGKFPFFSSKPSQDTRSSMRSGGENCSNFEVAA 96

Query: 103 LEQDREKVCYPNHSNLRVYMYDLPPEFHFGLMGW 2
             +     C PN   L+VYMYD+PPEFHFGL+GW
Sbjct: 97  SGKHIGNTCNPNQGLLKVYMYDMPPEFHFGLLGW 130


>ref|XP_004162952.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like, partial [Cucumis sativus]
          Length = 339

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
 Frame = -3

Query: 253 NSFIPTS-FRIIDVNSTSVYLRPNLMSE---------HTNQTIRSQEVVYQNSNSSK-MY 107
           NSF P+S  + I VN+TS YL+PN+  E            + +  ++V Y  SN  K   
Sbjct: 36  NSFFPSSVLKFIVVNNTSNYLKPNVEDEPMELPTQPGEAKEAVTDRDVDYPVSNFVKDEV 95

Query: 106 ALEQDREKVCYPNHSNLRVYMYDLPPEFHFGLMGW 2
           ++E   +  C P  + LRV+MYDLPP +HFGL+GW
Sbjct: 96  SVENQSDLGCDPAKARLRVFMYDLPPLYHFGLLGW 130


>ref|XP_004137584.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Cucumis sativus]
          Length = 494

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
 Frame = -3

Query: 253 NSFIPTS-FRIIDVNSTSVYLRPNLMSE---------HTNQTIRSQEVVYQNSNSSK-MY 107
           NSF P+S  + I VN+TS YL+PN+  E            + +  ++V Y  SN  K   
Sbjct: 36  NSFFPSSVLKFIVVNNTSNYLKPNVEDEPMELPTQPGEAKEAVTDRDVDYPVSNFVKDEV 95

Query: 106 ALEQDREKVCYPNHSNLRVYMYDLPPEFHFGLMGW 2
           ++E   +  C P  + LRV+MYDLPP +HFGL+GW
Sbjct: 96  SVENQSDLGCDPAKARLRVFMYDLPPLYHFGLLGW 130


>ref|XP_003550781.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 472

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -3

Query: 256 DNSFIPTSF-RIIDVNSTSVYLRPNLMSEHTNQTIRSQEVVYQNSNSSKMYALEQDREKV 80
           ++SFIP S   ++ VN+TS+  +PN   E     ++ Q   + NS S K  +  Q R+  
Sbjct: 35  NHSFIPRSVSELVLVNNTSLDFKPNFKREQ----VQPQSCQFSNS-SHKPSSPRQQRKIP 89

Query: 79  CYPNHSNLRVYMYDLPPEFHFGLMGW 2
           C P ++ LRV+MYDLPPEFHFGL+ W
Sbjct: 90  CDPTNALLRVFMYDLPPEFHFGLLDW 115


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