BLASTX nr result

ID: Panax21_contig00013381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013381
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27562.3| unnamed protein product [Vitis vinifera]              649   0.0  
ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like...   649   0.0  
ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|2...   640   0.0  
ref|XP_004135514.1| PREDICTED: ATP-dependent DNA helicase Q-like...   576   e-162
ref|XP_002514992.1| rothmund-thomson syndrome DNA helicase recq4...   540   e-151

>emb|CBI27562.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  649 bits (1674), Expect = 0.0
 Identities = 322/413 (77%), Positives = 361/413 (87%), Gaps = 1/413 (0%)
 Frame = +1

Query: 1    QYETDTISKFLSDGNIMAKSYHSGIPAKDRSRTQELFCANKIRVVVATVAFGMGLDKRDV 180
            Q ETD+ISK+L D NI AKSYHSGIPAKDRSRTQELFC+NKIRVVVATVAFGMGL+K DV
Sbjct: 276  QSETDSISKYLCDNNISAKSYHSGIPAKDRSRTQELFCSNKIRVVVATVAFGMGLNKSDV 335

Query: 181  GAVIHYSLPESLEEYVQEIGRAGRDGRLSFCHLLFEDITYYKLRSLMYSDGLDEYAVNRF 360
            GAVIH+SLPESLEEYVQEIGRAGRDG LS+CHLLF+DITY+KLRSLM+SDG+DEYAVNRF
Sbjct: 336  GAVIHFSLPESLEEYVQEIGRAGRDGNLSYCHLLFDDITYFKLRSLMHSDGVDEYAVNRF 395

Query: 361  LCQVFSCD-DFPGKVCSLVRESLSRKFDMKEEVMLTILTRLELGEVQYLHLLPQMNVTCS 537
            L QVFS     PGKV S+V+E+ SRKFDMKEEVMLTILT LELGEVQYL LLP +NVTCS
Sbjct: 396  LSQVFSNGMGSPGKVHSIVKEAASRKFDMKEEVMLTILTHLELGEVQYLSLLPPLNVTCS 455

Query: 538  LNFHKTPPAMLAAKDIFVAAILKKSETKQGQYVFDIPTVANSIRVRAVDLTSQLQNLKLK 717
            LNFHKT PA+LA  DI VAAILKKSETKQG YVFDIPTVANSI +  +D+ +QLQNLKLK
Sbjct: 456  LNFHKTTPALLADWDIVVAAILKKSETKQGHYVFDIPTVANSIGITTIDILNQLQNLKLK 515

Query: 718  GEVTYELKDPAYCYTIVNALKDLCSLTADLTKWLSEVENCKVRKIDAMFNTVVFAVKECD 897
            GE+TYE+KDPAYCYTIV+   DLC L A LTKWLSEVE+CKV+K+D MFN  V AV+ C+
Sbjct: 516  GEITYEMKDPAYCYTIVDVPGDLCCLAAHLTKWLSEVESCKVQKLDTMFNAAVSAVELCE 575

Query: 898  KILGCHDGQHTPCLQRKILEYFNADDDSEVPNKMGQCSPFLRSDIKVFLQSNNHAKFTPR 1077
            K  GC   QHTPCLQRKI +YF+ D + ++PNKM Q SPFLR+DIKVFLQSN+  KFTPR
Sbjct: 576  KKCGCLGAQHTPCLQRKISDYFSGDGNGDIPNKMDQSSPFLRADIKVFLQSNSQVKFTPR 635

Query: 1078 AVARIMHGIASPAFPSATWSRTHFWGRYTQIDFKVVMEAAKAELLNIVGKDAL 1236
            AVARIMHGIASPA+PSATWSRTHFWGRY Q+DF+VVM+AAKAEL+N VGKDAL
Sbjct: 636  AVARIMHGIASPAYPSATWSRTHFWGRYMQMDFQVVMKAAKAELMNFVGKDAL 688


>ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis vinifera]
          Length = 941

 Score =  649 bits (1674), Expect = 0.0
 Identities = 322/413 (77%), Positives = 361/413 (87%), Gaps = 1/413 (0%)
 Frame = +1

Query: 1    QYETDTISKFLSDGNIMAKSYHSGIPAKDRSRTQELFCANKIRVVVATVAFGMGLDKRDV 180
            Q ETD+ISK+L D NI AKSYHSGIPAKDRSRTQELFC+NKIRVVVATVAFGMGL+K DV
Sbjct: 529  QSETDSISKYLCDNNISAKSYHSGIPAKDRSRTQELFCSNKIRVVVATVAFGMGLNKSDV 588

Query: 181  GAVIHYSLPESLEEYVQEIGRAGRDGRLSFCHLLFEDITYYKLRSLMYSDGLDEYAVNRF 360
            GAVIH+SLPESLEEYVQEIGRAGRDG LS+CHLLF+DITY+KLRSLM+SDG+DEYAVNRF
Sbjct: 589  GAVIHFSLPESLEEYVQEIGRAGRDGNLSYCHLLFDDITYFKLRSLMHSDGVDEYAVNRF 648

Query: 361  LCQVFSCD-DFPGKVCSLVRESLSRKFDMKEEVMLTILTRLELGEVQYLHLLPQMNVTCS 537
            L QVFS     PGKV S+V+E+ SRKFDMKEEVMLTILT LELGEVQYL LLP +NVTCS
Sbjct: 649  LSQVFSNGMGSPGKVHSIVKEAASRKFDMKEEVMLTILTHLELGEVQYLSLLPPLNVTCS 708

Query: 538  LNFHKTPPAMLAAKDIFVAAILKKSETKQGQYVFDIPTVANSIRVRAVDLTSQLQNLKLK 717
            LNFHKT PA+LA  DI VAAILKKSETKQG YVFDIPTVANSI +  +D+ +QLQNLKLK
Sbjct: 709  LNFHKTTPALLADWDIVVAAILKKSETKQGHYVFDIPTVANSIGITTIDILNQLQNLKLK 768

Query: 718  GEVTYELKDPAYCYTIVNALKDLCSLTADLTKWLSEVENCKVRKIDAMFNTVVFAVKECD 897
            GE+TYE+KDPAYCYTIV+   DLC L A LTKWLSEVE+CKV+K+D MFN  V AV+ C+
Sbjct: 769  GEITYEMKDPAYCYTIVDVPGDLCCLAAHLTKWLSEVESCKVQKLDTMFNAAVSAVELCE 828

Query: 898  KILGCHDGQHTPCLQRKILEYFNADDDSEVPNKMGQCSPFLRSDIKVFLQSNNHAKFTPR 1077
            K  GC   QHTPCLQRKI +YF+ D + ++PNKM Q SPFLR+DIKVFLQSN+  KFTPR
Sbjct: 829  KKCGCLGAQHTPCLQRKISDYFSGDGNGDIPNKMDQSSPFLRADIKVFLQSNSQVKFTPR 888

Query: 1078 AVARIMHGIASPAFPSATWSRTHFWGRYTQIDFKVVMEAAKAELLNIVGKDAL 1236
            AVARIMHGIASPA+PSATWSRTHFWGRY Q+DF+VVM+AAKAEL+N VGKDAL
Sbjct: 889  AVARIMHGIASPAYPSATWSRTHFWGRYMQMDFQVVMKAAKAELMNFVGKDAL 941


>ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|222864667|gb|EEF01798.1|
            predicted protein [Populus trichocarpa]
          Length = 901

 Score =  640 bits (1652), Expect = 0.0
 Identities = 309/413 (74%), Positives = 360/413 (87%), Gaps = 1/413 (0%)
 Frame = +1

Query: 1    QYETDTISKFLSDGNIMAKSYHSGIPAKDRSRTQELFCANKIRVVVATVAFGMGLDKRDV 180
            Q ETD IS++L D NI AKSYHS I +KDRSR QELFC+NKIRVVVATVAFGMGLDKRDV
Sbjct: 489  QSETDIISRYLCDNNISAKSYHSSITSKDRSRIQELFCSNKIRVVVATVAFGMGLDKRDV 548

Query: 181  GAVIHYSLPESLEEYVQEIGRAGRDGRLSFCHLLFEDITYYKLRSLMYSDGLDEYAVNRF 360
            GAVIHYS+PESLEEYVQEIGRAGRDGRLS CHL F+D TY+KLRSLM+S+G+DEYAVN+F
Sbjct: 549  GAVIHYSMPESLEEYVQEIGRAGRDGRLSHCHLFFDDTTYFKLRSLMHSEGVDEYAVNKF 608

Query: 361  LCQVFSCD-DFPGKVCSLVRESLSRKFDMKEEVMLTILTRLELGEVQYLHLLPQMNVTCS 537
            LC++FS D   PGK+ ++++ES SRKFDMKEEVMLT+LT+LELGEVQY+HLLPQ+NVTC+
Sbjct: 609  LCEIFSTDMKHPGKIHAIIKESSSRKFDMKEEVMLTLLTQLELGEVQYIHLLPQLNVTCT 668

Query: 538  LNFHKTPPAMLAAKDIFVAAILKKSETKQGQYVFDIPTVANSIRVRAVDLTSQLQNLKLK 717
            LNF+KT P +L+ KD  V+AILKKSETKQGQYVFDIPTVANSI V   +L++ LQNLKLK
Sbjct: 669  LNFYKTSPMLLSDKDNVVSAILKKSETKQGQYVFDIPTVANSIGVTTTELSNHLQNLKLK 728

Query: 718  GEVTYELKDPAYCYTIVNALKDLCSLTADLTKWLSEVENCKVRKIDAMFNTVVFAVKECD 897
            GE+TY++KDPAYCY+IV   +D CSL+  LTKWL EVE  KV+K+DAMFN  +FAV +C+
Sbjct: 729  GEITYDVKDPAYCYSIVEVPRDFCSLSRHLTKWLLEVECFKVQKLDAMFNAAIFAVNDCE 788

Query: 898  KILGCHDGQHTPCLQRKILEYFNADDDSEVPNKMGQCSPFLRSDIKVFLQSNNHAKFTPR 1077
            K+ GCH  QHTPCLQRKIL+YF  D   ++PNKMGQ S FLR+DIKVFLQ N+ AKFTPR
Sbjct: 789  KMQGCHGTQHTPCLQRKILDYFKDDGRRDIPNKMGQSSSFLRADIKVFLQGNSQAKFTPR 848

Query: 1078 AVARIMHGIASPAFPSATWSRTHFWGRYTQIDFKVVMEAAKAELLNIVGKDAL 1236
            A+ARIMHGIASPA+PSATWSRTHFWGRYTQIDF+VVMEAAK EL+N VGKDAL
Sbjct: 849  AIARIMHGIASPAYPSATWSRTHFWGRYTQIDFQVVMEAAKVELMNFVGKDAL 901


>ref|XP_004135514.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Cucumis sativus]
            gi|449495007|ref|XP_004159708.1| PREDICTED: ATP-dependent
            DNA helicase Q-like 5-like [Cucumis sativus]
          Length = 952

 Score =  576 bits (1485), Expect = e-162
 Identities = 289/413 (69%), Positives = 337/413 (81%), Gaps = 2/413 (0%)
 Frame = +1

Query: 1    QYETDTISKFLSDGNIMAKSYHSGIPAKDRSRTQELFCANKIRVVVATVAFGMGLDKRDV 180
            Q ETD +S++LSD  I AKSYHSG+ AKDR R QE FC+NKIRVVVATVAFGMGLDKRDV
Sbjct: 538  QLETDLVSRYLSDNGISAKSYHSGLLAKDRKRIQENFCSNKIRVVVATVAFGMGLDKRDV 597

Query: 181  GAVIHYSLPESLEEYVQEIGRAGRDGRLSFCHLLFEDITYYKLRSLMYSDGLDEYAVNRF 360
            GAVIHYSLPESLEEYVQEIGRAGRDGRLS+CHL  ++ TY+KLRSLM+SDG+DEY +N+F
Sbjct: 598  GAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFLDNDTYFKLRSLMHSDGVDEYNINKF 657

Query: 361  LCQVFSCDD-FPGKVCSLVRESLSRKFDMKEEVMLTILTRLELGEVQYLHLLPQMNVTCS 537
            L +VFS ++   GKV S+V+E  SRKFDMKEEVM+TILT LELGE+QYL +LPQ+NVTCS
Sbjct: 658  LSEVFSGNNSLCGKVYSIVKEPASRKFDMKEEVMITILTYLELGEMQYLRVLPQLNVTCS 717

Query: 538  LNFHKTPPAMLAAKDIFVAAILKKSETKQGQYVFDIPTVANSIRVRAVDLTSQLQNLKLK 717
            LNFHKT PAMLA KDI VA ILKKSETKQGQ+VFD+ TV NSI + A  L++ LQNLKLK
Sbjct: 718  LNFHKTSPAMLADKDIVVAEILKKSETKQGQHVFDMLTVVNSIGISATSLSNHLQNLKLK 777

Query: 718  GEVTYELKDPAYCYTIVNALKDLCSLTADLTKWLSEVENCKVRKIDAMFNTVVFAVK-EC 894
            GEVTYE+KD AYCYTI+   +D CSL+A L KWLSE++  K+RK+DAMF+ V  A+    
Sbjct: 778  GEVTYEMKDMAYCYTILKTPEDFCSLSAHLRKWLSEIQTSKLRKLDAMFDAVTSAINLYG 837

Query: 895  DKILGCHDGQHTPCLQRKILEYFNADDDSEVPNKMGQCSPFLRSDIKVFLQSNNHAKFTP 1074
             K   C + + TPCL+ KI  YF   D  + PNKM Q SPFLR+DIKVFLQSN+ AKFTP
Sbjct: 838  KKTQACCNFEQTPCLEEKICSYFQEGDTYDTPNKMSQSSPFLRADIKVFLQSNSQAKFTP 897

Query: 1075 RAVARIMHGIASPAFPSATWSRTHFWGRYTQIDFKVVMEAAKAELLNIVGKDA 1233
            RAVARIMHGI SPA+PS  WSRTHFWGRYT ++F+ VMEAA  EL+NIVGKDA
Sbjct: 898  RAVARIMHGIGSPAYPSTIWSRTHFWGRYTNVNFEAVMEAATIELVNIVGKDA 950


>ref|XP_002514992.1| rothmund-thomson syndrome DNA helicase recq4, putative [Ricinus
            communis] gi|223546043|gb|EEF47546.1| rothmund-thomson
            syndrome DNA helicase recq4, putative [Ricinus communis]
          Length = 852

 Score =  540 bits (1391), Expect = e-151
 Identities = 271/412 (65%), Positives = 322/412 (78%)
 Frame = +1

Query: 1    QYETDTISKFLSDGNIMAKSYHSGIPAKDRSRTQELFCANKIRVVVATVAFGMGLDKRDV 180
            Q ETD IS++L D NI AKSYHS I +KDRSR QELFC+NKIRVVVATVAFGMGLDK DV
Sbjct: 485  QSETDIISRYLCDNNISAKSYHSAILSKDRSRIQELFCSNKIRVVVATVAFGMGLDKSDV 544

Query: 181  GAVIHYSLPESLEEYVQEIGRAGRDGRLSFCHLLFEDITYYKLRSLMYSDGLDEYAVNRF 360
            GAVIHYSLPESLEEYVQEIGRAGRDGRLS+CHL F+D TYYKLRSLM+SDG+DEY V++F
Sbjct: 545  GAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFFDDTTYYKLRSLMHSDGIDEYTVSKF 604

Query: 361  LCQVFSCDDFPGKVCSLVRESLSRKFDMKEEVMLTILTRLELGEVQYLHLLPQMNVTCSL 540
            LC+VF+ +   GK+CS+++ S SR  D+KEEVMLTILT+LELGEVQYL LLP++NVTC+L
Sbjct: 605  LCEVFT-NCTCGKICSIIKASASRTLDVKEEVMLTILTQLELGEVQYLRLLPELNVTCTL 663

Query: 541  NFHKTPPAMLAAKDIFVAAILKKSETKQGQYVFDIPTVANSIRVRAVDLTSQLQNLKLKG 720
            NF+KT P +LA KDI V+AILKKSET+QGQYVFDIPT+AN+I V A++L++ LQNL    
Sbjct: 664  NFYKTAPVLLADKDIVVSAILKKSETRQGQYVFDIPTIANTIGVTAIELSNHLQNL---- 719

Query: 721  EVTYELKDPAYCYTIVNALKDLCSLTADLTKWLSEVENCKVRKIDAMFNTVVFAVKECDK 900
                                                   KVR++DAMFN  VFAV EC+K
Sbjct: 720  ---------------------------------------KVRRLDAMFNAAVFAVNECEK 740

Query: 901  ILGCHDGQHTPCLQRKILEYFNADDDSEVPNKMGQCSPFLRSDIKVFLQSNNHAKFTPRA 1080
            + GC+D QHTPCLQRKIL+YF  D  +++ NKM Q SPFLR+DIKVFLQSN+ AKFTPRA
Sbjct: 741  MQGCNDSQHTPCLQRKILDYFKEDGRNDITNKMRQSSPFLRADIKVFLQSNSQAKFTPRA 800

Query: 1081 VARIMHGIASPAFPSATWSRTHFWGRYTQIDFKVVMEAAKAELLNIVGKDAL 1236
            +ARIM GI SPA+PSATWS+THFWGRYT IDF+VVMEAAK EL++  GK+A+
Sbjct: 801  IARIMQGIPSPAYPSATWSKTHFWGRYTHIDFQVVMEAAKTELMHFAGKEAM 852


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