BLASTX nr result

ID: Panax21_contig00013376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013376
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510419.1| glucose-1-phosphate adenylyltransferase, put...    72   1e-11
ref|XP_002890743.1| hypothetical protein ARALYDRAFT_472972 [Arab...    72   1e-11
ref|NP_174089.1| glucose-1-phosphate adenylyltransferase large s...    72   2e-11
sp|P55233.1|GLGL1_BETVU RecName: Full=Glucose-1-phosphate adenyl...    70   4e-11
ref|XP_002300758.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>ref|XP_002510419.1| glucose-1-phosphate adenylyltransferase, putative [Ricinus
           communis] gi|223551120|gb|EEF52606.1|
           glucose-1-phosphate adenylyltransferase, putative
           [Ricinus communis]
          Length = 523

 Score = 72.0 bits (175), Expect(2) = 1e-11
 Identities = 36/53 (67%), Positives = 43/53 (81%)
 Frame = +1

Query: 307 VPIVGFYRLIDIPMSNCISNVIRNIFMLSQFNSFSLSCHLALT*NFENGKFWG 465
           VPI G YRLIDIPMSNCI++ IR IF+++QFNSFSL+ HLA T NF NG  +G
Sbjct: 115 VPIGGCYRLIDIPMSNCINSGIRKIFIMTQFNSFSLNRHLARTYNFGNGVNFG 167



 Score = 23.5 bits (49), Expect(2) = 1e-11
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 455 NFGDGFVEV 481
           NFGDGFVEV
Sbjct: 165 NFGDGFVEV 173


>ref|XP_002890743.1| hypothetical protein ARALYDRAFT_472972 [Arabidopsis lyrata subsp.
           lyrata] gi|297336585|gb|EFH67002.1| hypothetical protein
           ARALYDRAFT_472972 [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score = 72.0 bits (175), Expect(2) = 1e-11
 Identities = 36/53 (67%), Positives = 43/53 (81%)
 Frame = +1

Query: 307 VPIVGFYRLIDIPMSNCISNVIRNIFMLSQFNSFSLSCHLALT*NFENGKFWG 465
           VPI G YRLIDIPMSNCI++ IR IF+L+QFNSFSL+ HL+ T NF NG  +G
Sbjct: 110 VPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSCTYNFGNGVNFG 162



 Score = 23.5 bits (49), Expect(2) = 1e-11
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 455 NFGDGFVEV 481
           NFGDGFVEV
Sbjct: 160 NFGDGFVEV 168


>ref|NP_174089.1| glucose-1-phosphate adenylyltransferase large subunit 2
           [Arabidopsis thaliana]
           gi|12644324|sp|P55230.2|GLGL2_ARATH RecName:
           Full=Glucose-1-phosphate adenylyltransferase large
           subunit 2, chloroplastic; AltName: Full=ADP-glucose
           pyrophosphorylase; AltName: Full=ADP-glucose synthase;
           AltName: Full=AGPase S; AltName:
           Full=Alpha-D-glucose-1-phosphate adenyl transferase;
           Flags: Precursor gi|6693019|gb|AAF24945.1|AC012375_8
           T22C5.13 [Arabidopsis thaliana]
           gi|17380942|gb|AAL36283.1| putative ADP-glucose
           pyrophosphorylase [Arabidopsis thaliana]
           gi|20258949|gb|AAM14190.1| putative ADP-glucose
           pyrophosphorylase [Arabidopsis thaliana]
           gi|332192741|gb|AEE30862.1| glucose-1-phosphate
           adenylyltransferase large subunit 2 [Arabidopsis
           thaliana]
          Length = 518

 Score = 71.6 bits (174), Expect(2) = 2e-11
 Identities = 36/53 (67%), Positives = 43/53 (81%)
 Frame = +1

Query: 307 VPIVGFYRLIDIPMSNCISNVIRNIFMLSQFNSFSLSCHLALT*NFENGKFWG 465
           VPI G YRLIDIPMSNCI++ IR IF+L+QFNSFSL+ HL+ T NF NG  +G
Sbjct: 110 VPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVNFG 162



 Score = 23.5 bits (49), Expect(2) = 2e-11
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 455 NFGDGFVEV 481
           NFGDGFVEV
Sbjct: 160 NFGDGFVEV 168


>sp|P55233.1|GLGL1_BETVU RecName: Full=Glucose-1-phosphate adenylyltransferase large
           subunit, chloroplastic/amyloplastic; AltName:
           Full=ADP-glucose pyrophosphorylase; AltName:
           Full=ADP-glucose synthase; AltName: Full=AGPase S;
           AltName: Full=Alpha-D-glucose-1-phosphate adenyl
           transferase; Flags: Precursor gi|556624|emb|CAA55516.1|
           ADP-glucose pyrophosphorylase [Beta vulgaris subsp.
           vulgaris]
          Length = 522

 Score = 70.5 bits (171), Expect(2) = 4e-11
 Identities = 35/53 (66%), Positives = 43/53 (81%)
 Frame = +1

Query: 307 VPIVGFYRLIDIPMSNCISNVIRNIFMLSQFNSFSLSCHLALT*NFENGKFWG 465
           VPI G YRLID+PMSNCI++ IR IF+L+QFNSFSL+ HLA T NF +G  +G
Sbjct: 114 VPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLARTYNFGDGVNFG 166



 Score = 23.5 bits (49), Expect(2) = 4e-11
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 455 NFGDGFVEV 481
           NFGDGFVEV
Sbjct: 164 NFGDGFVEV 172


>ref|XP_002300758.1| predicted protein [Populus trichocarpa] gi|222842484|gb|EEE80031.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 72.0 bits (175), Expect(2) = 5e-11
 Identities = 36/53 (67%), Positives = 43/53 (81%)
 Frame = +1

Query: 307 VPIVGFYRLIDIPMSNCISNVIRNIFMLSQFNSFSLSCHLALT*NFENGKFWG 465
           VPI G YRLIDIPMSNCI++ I+ IF+L+QFNSFSL+ HLA T NF NG  +G
Sbjct: 120 VPIGGCYRLIDIPMSNCINSGIKKIFILTQFNSFSLNRHLARTYNFGNGVSFG 172



 Score = 21.6 bits (44), Expect(2) = 5e-11
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 455 NFGDGFVEV 481
           +FGDGFVEV
Sbjct: 170 SFGDGFVEV 178


Top