BLASTX nr result

ID: Panax21_contig00013374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013374
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2,...   258   1e-66
ref|XP_002274735.1| PREDICTED: psbP domain-containing protein 2,...   256   5e-66
ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2,...   256   9e-66
ref|XP_002309937.1| predicted protein [Populus trichocarpa] gi|2...   250   5e-64
ref|XP_003602661.1| PsbP domain-containing protein [Medicago tru...   247   4e-63

>ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Cucumis sativus] gi|449523543|ref|XP_004168783.1|
           PREDICTED: psbP domain-containing protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 357

 Score =  258 bits (660), Expect = 1e-66
 Identities = 133/193 (68%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
 Frame = -1

Query: 858 KLQVCLSKRMLNFSLLTVLL-SFPLSRLSTAMAEELELQRYTDSIEGFTLLIPSSWIKVE 682
           K  +  S+R +N S+L++    F  S  S   AE+ EL+RYTDS EGFTLL PSSW+KV+
Sbjct: 162 KFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVD 221

Query: 681 KAGATVLFEDXXXXXXXXXXXVSPVRLTNLGEFGTPQFVADKLIQAEKRKESTKEAEVIA 502
           KAGATVLFE+           V+PVRLT+LGEFGTPQFVADKLIQAEKRKESTK+A V+ 
Sbjct: 222 KAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVG 281

Query: 501 FSERSGHGGLQVYEFEYEIDSTRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDAHRR 322
            +ERSG GGLQVYEFEY +DSTRGGMKRIFSAAFVASKKLY+LNI+HSDKPESPLD+ +R
Sbjct: 282 VAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKR 341

Query: 321 LMLEQVLHSFDTA 283
           +MLEQVLHSFD A
Sbjct: 342 MMLEQVLHSFDAA 354


>ref|XP_002274735.1| PREDICTED: psbP domain-containing protein 2, chloroplastic [Vitis
           vinifera] gi|296082589|emb|CBI21594.3| unnamed protein
           product [Vitis vinifera]
          Length = 234

 Score =  256 bits (655), Expect = 5e-66
 Identities = 136/193 (70%), Positives = 158/193 (81%), Gaps = 2/193 (1%)
 Frame = -1

Query: 855 LQVCLSKRMLNFSLLTVLLSFPL-SRLSTAMAEELE-LQRYTDSIEGFTLLIPSSWIKVE 682
           L+ CLSKR LN S++++LL+  L + +   +A+ELE  QRYTDS+EGFTLLIPSSWIKV+
Sbjct: 39  LECCLSKRDLNLSIVSLLLAAALPNTVFKVVAQELEEFQRYTDSVEGFTLLIPSSWIKVD 98

Query: 681 KAGATVLFEDXXXXXXXXXXXVSPVRLTNLGEFGTPQFVADKLIQAEKRKESTKEAEVIA 502
           K GATVLFE+           VSPVRL +L +FG+PQFVADK+IQAEKRKESTK+AE+I 
Sbjct: 99  KGGATVLFEEENKGVNNVGVVVSPVRLESLKQFGSPQFVADKVIQAEKRKESTKDAELIG 158

Query: 501 FSERSGHGGLQVYEFEYEIDSTRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDAHRR 322
            +ERSG GGLQVYEFEY +DSTRGGMKRIFSAAFV SKKLYLLNIAH DKPESPLD+H R
Sbjct: 159 VAERSGQGGLQVYEFEYIVDSTRGGMKRIFSAAFVNSKKLYLLNIAHIDKPESPLDSHTR 218

Query: 321 LMLEQVLHSFDTA 283
            MLEQVLHSFD A
Sbjct: 219 TMLEQVLHSFDAA 231


>ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Glycine max]
          Length = 251

 Score =  256 bits (653), Expect = 9e-66
 Identities = 137/199 (68%), Positives = 156/199 (78%), Gaps = 6/199 (3%)
 Frame = -1

Query: 861 MKLQVCLSKRMLNFS-LLTVLL-----SFPLSRLSTAMAEELELQRYTDSIEGFTLLIPS 700
           M L +  SKR LN S LLT  L       P +R +  +A+ELELQRYTDS EGFTLL PS
Sbjct: 52  MHLALSFSKRNLNLSILLTTFLWGEGVLMPNARDALLLAQELELQRYTDSEEGFTLLTPS 111

Query: 699 SWIKVEKAGATVLFEDXXXXXXXXXXXVSPVRLTNLGEFGTPQFVADKLIQAEKRKESTK 520
           SW KV+KAGATVLF++           V+PVRL  L EFGTPQFVADKL+QAE+RKESTK
Sbjct: 112 SWTKVDKAGATVLFQEADMGSNNIGVVVNPVRLKTLEEFGTPQFVADKLLQAERRKESTK 171

Query: 519 EAEVIAFSERSGHGGLQVYEFEYEIDSTRGGMKRIFSAAFVASKKLYLLNIAHSDKPESP 340
           EAE+I  +ERSG GGLQ+YEFEY++DSTRGGMKRIFSAAFVASKKLYLLNI HSDKPESP
Sbjct: 172 EAELITVAERSGEGGLQIYEFEYKVDSTRGGMKRIFSAAFVASKKLYLLNIVHSDKPESP 231

Query: 339 LDAHRRLMLEQVLHSFDTA 283
           LD H+R++LEQVLHSFD A
Sbjct: 232 LDPHKRMILEQVLHSFDAA 250


>ref|XP_002309937.1| predicted protein [Populus trichocarpa] gi|222852840|gb|EEE90387.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  250 bits (638), Expect = 5e-64
 Identities = 129/187 (68%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
 Frame = -1

Query: 837 KRMLNFSLLTVLLSFPLSRLS--TAMAEELELQRYTDSIEGFTLLIPSSWIKVEKAGATV 664
           +R LN S+L +L++  L  LS  + +A+ELEL RYTDS EGFTLL PSS++KV+KAGATV
Sbjct: 15  RRKLNLSVLALLINGSLPNLSNNSILAQELELARYTDSKEGFTLLTPSSYVKVDKAGATV 74

Query: 663 LFEDXXXXXXXXXXXVSPVRLTNLGEFGTPQFVADKLIQAEKRKESTKEAEVIAFSERSG 484
           LFE+           V+PVRL +L EFG+PQFVADKLIQAEK+KESTK+AEVI+ +ERSG
Sbjct: 75  LFEEVNKGSNNIGVVVTPVRLASLDEFGSPQFVADKLIQAEKKKESTKDAEVISVAERSG 134

Query: 483 HGGLQVYEFEYEIDSTRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDAHRRLMLEQV 304
           HGGLQVYEFEY++DSTRGGMKRIFSAAFV+SKKLY+LNIAHSDKPESPLD   R +LE+V
Sbjct: 135 HGGLQVYEFEYKVDSTRGGMKRIFSAAFVSSKKLYILNIAHSDKPESPLDTDTRTILEEV 194

Query: 303 LHSFDTA 283
           +HSFD A
Sbjct: 195 IHSFDAA 201


>ref|XP_003602661.1| PsbP domain-containing protein [Medicago truncatula]
           gi|358348394|ref|XP_003638232.1| PsbP domain-containing
           protein [Medicago truncatula]
           gi|355491709|gb|AES72912.1| PsbP domain-containing
           protein [Medicago truncatula]
           gi|355504167|gb|AES85370.1| PsbP domain-containing
           protein [Medicago truncatula]
          Length = 237

 Score =  247 bits (630), Expect = 4e-63
 Identities = 135/224 (60%), Positives = 159/224 (70%), Gaps = 2/224 (0%)
 Frame = -1

Query: 951 KCLFSTLSSPPIRPPFLHNFIRNDLNSSIVMKLQVCLSKRMLNFSLLTVLLSFPLSRLST 772
           K + ++ SSP + P        +D +     K   C  KR LN +LL     + +     
Sbjct: 17  KLIHASSSSPTLIPKSTSPSCIHDSH-----KQMPCFGKRKLNLTLLLTPFLWSVFPNVL 71

Query: 771 AMAEEL--ELQRYTDSIEGFTLLIPSSWIKVEKAGATVLFEDXXXXXXXXXXXVSPVRLT 598
             A+EL  ELQRYTDS EGFTL IPSSW KV+KAGAT LF+D           V+PVRLT
Sbjct: 72  LSAQELITELQRYTDSNEGFTLQIPSSWTKVDKAGATALFQDPNKGSNNIGVVVNPVRLT 131

Query: 597 NLGEFGTPQFVADKLIQAEKRKESTKEAEVIAFSERSGHGGLQVYEFEYEIDSTRGGMKR 418
            LG+FGTPQFV DKL+QAE+RKESTKEAEV+  +ERSG GGLQVYEFEY+IDSTRGG+KR
Sbjct: 132 ALGDFGTPQFVVDKLLQAERRKESTKEAEVVTVAERSGKGGLQVYEFEYKIDSTRGGLKR 191

Query: 417 IFSAAFVASKKLYLLNIAHSDKPESPLDAHRRLMLEQVLHSFDT 286
           IFSAAFVASKK+Y LNI HSD PESPLD H+R+MLEQVLHSFD+
Sbjct: 192 IFSAAFVASKKIYFLNIVHSDNPESPLDQHKRMMLEQVLHSFDS 235


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