BLASTX nr result

ID: Panax21_contig00013341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013341
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18867.3| unnamed protein product [Vitis vinifera]              356   7e-96
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...   356   7e-96
gb|ADI58371.1| pentatricopeptide repeat-containing protein [Caps...   314   4e-83
ref|XP_002299265.1| predicted protein [Populus trichocarpa] gi|2...   313   9e-83
gb|AAF16672.1|AC012394_21 hypothetical protein; 84465-87513 [Ara...   306   6e-81

>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  356 bits (914), Expect = 7e-96
 Identities = 181/283 (63%), Positives = 226/283 (79%)
 Frame = -2

Query: 1382 LRALGAEGMMNDLIHYLRVAENQFSRSNTRLGTPIYNTVLHSLVEAKESRLAVEMFKTMI 1203
            L+ALGAEGM+ +L+ YL VAENQF R+NT LGTPIYNTVLHSLVEAKES +A+E+FK MI
Sbjct: 520  LKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSLVEAKESHIAIEIFKNMI 579

Query: 1202 ACGYRPDAATYSIMIHCCTTVIRGFKSACALIALMIRDGFCPQVLTYTALIEILLKNKDF 1023
            +     DAATY+IMI CC+T I+ +KSACAL+++M+RDGF P  LTYTALI+ILL+ +DF
Sbjct: 580  SRSLPRDAATYNIMIDCCST-IKCYKSACALVSMMMRDGFLPWTLTYTALIKILLEREDF 638

Query: 1022 DGALNILDQACSEEIQLDVLLFNTILQAACDEGRLDVVEILVERMHEEKIHPDPSTCGYV 843
            D ALN+LDQA  EEI  DVLL+NTILQ AC +GR+D++E++ E+MH+EKI PDPSTC YV
Sbjct: 639  DEALNLLDQARLEEIPSDVLLYNTILQKACLKGRIDLIELVAEQMHQEKIQPDPSTCYYV 698

Query: 842  FSAYIENGFFSTAVEALQVLSMRMILADDHSPEEKRDSFXXXXXXXXXXXXESRIIELFK 663
            FS+Y++ GFFSTA+E+LQVLSMRMI  D+ + EEKR               ES+I++ FK
Sbjct: 699  FSSYVDGGFFSTALESLQVLSMRMISEDNSTLEEKRTEL-EDFIHSEDKDAESQILQFFK 757

Query: 662  DSKENLAVGLLNLRWCAIVGSPISWLPDQSRWAKRLSNSYGSR 534
             S ENLA+ LLNLRWCAI GSPISW P++S WA+RL NS+GSR
Sbjct: 758  GSDENLAIALLNLRWCAISGSPISWTPNESLWARRLFNSHGSR 800


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
            [Vitis vinifera]
          Length = 728

 Score =  356 bits (914), Expect = 7e-96
 Identities = 181/283 (63%), Positives = 226/283 (79%)
 Frame = -2

Query: 1382 LRALGAEGMMNDLIHYLRVAENQFSRSNTRLGTPIYNTVLHSLVEAKESRLAVEMFKTMI 1203
            L+ALGAEGM+ +L+ YL VAENQF R+NT LGTPIYNTVLHSLVEAKES +A+E+FK MI
Sbjct: 444  LKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIYNTVLHSLVEAKESHIAIEIFKNMI 503

Query: 1202 ACGYRPDAATYSIMIHCCTTVIRGFKSACALIALMIRDGFCPQVLTYTALIEILLKNKDF 1023
            +     DAATY+IMI CC+T I+ +KSACAL+++M+RDGF P  LTYTALI+ILL+ +DF
Sbjct: 504  SRSLPRDAATYNIMIDCCST-IKCYKSACALVSMMMRDGFLPWTLTYTALIKILLEREDF 562

Query: 1022 DGALNILDQACSEEIQLDVLLFNTILQAACDEGRLDVVEILVERMHEEKIHPDPSTCGYV 843
            D ALN+LDQA  EEI  DVLL+NTILQ AC +GR+D++E++ E+MH+EKI PDPSTC YV
Sbjct: 563  DEALNLLDQARLEEIPSDVLLYNTILQKACLKGRIDLIELVAEQMHQEKIQPDPSTCYYV 622

Query: 842  FSAYIENGFFSTAVEALQVLSMRMILADDHSPEEKRDSFXXXXXXXXXXXXESRIIELFK 663
            FS+Y++ GFFSTA+E+LQVLSMRMI  D+ + EEKR               ES+I++ FK
Sbjct: 623  FSSYVDGGFFSTALESLQVLSMRMISEDNSTLEEKRTEL-EDFIHSEDKDAESQILQFFK 681

Query: 662  DSKENLAVGLLNLRWCAIVGSPISWLPDQSRWAKRLSNSYGSR 534
             S ENLA+ LLNLRWCAI GSPISW P++S WA+RL NS+GSR
Sbjct: 682  GSDENLAIALLNLRWCAISGSPISWTPNESLWARRLFNSHGSR 724


>gb|ADI58371.1| pentatricopeptide repeat-containing protein [Capsicum annuum]
          Length = 805

 Score =  314 bits (804), Expect = 4e-83
 Identities = 157/285 (55%), Positives = 216/285 (75%)
 Frame = -2

Query: 1382 LRALGAEGMMNDLIHYLRVAENQFSRSNTRLGTPIYNTVLHSLVEAKESRLAVEMFKTMI 1203
            L+ALG EGM+ +LI YL  AEN+FSR +T + TP+YNTVLHSLVEAKES++A +MFK+M+
Sbjct: 521  LKALGTEGMIKELIQYLHAAENRFSRYDTYMITPVYNTVLHSLVEAKESQMATKMFKSMV 580

Query: 1202 ACGYRPDAATYSIMIHCCTTVIRGFKSACALIALMIRDGFCPQVLTYTALIEILLKNKDF 1023
            + G  PDAATY+IMI CC+ +I  F+SA ALI++M R+GF P+ +T T L++ILL+++DF
Sbjct: 581  SSGVPPDAATYNIMIDCCS-IIGCFRSALALISMMFRNGFNPEAVTLTGLLKILLRSEDF 639

Query: 1022 DGALNILDQACSEEIQLDVLLFNTILQAACDEGRLDVVEILVERMHEEKIHPDPSTCGYV 843
            DG L +L+Q  SE IQLDVLL++T+LQ A ++GR+DV+E++VE+MH + + PDPSTC +V
Sbjct: 640  DGTLKLLNQGISEGIQLDVLLYDTVLQVASEKGRIDVIELIVEQMHLQGVLPDPSTCSHV 699

Query: 842  FSAYIENGFFSTAVEALQVLSMRMILADDHSPEEKRDSFXXXXXXXXXXXXESRIIELFK 663
            F+AY+++GF++TA+EALQVLS+RMI       +EK+               ESRI++ FK
Sbjct: 700  FAAYVDHGFYNTAMEALQVLSVRMIAGGFKDNDEKQTEL-ENLILGEDSEDESRILKPFK 758

Query: 662  DSKENLAVGLLNLRWCAIVGSPISWLPDQSRWAKRLSNSYGSRIS 528
            DSKE L V LL LRWCAI+G P+SW P  S WA+RLS++  S  S
Sbjct: 759  DSKEYLTVALLQLRWCAILGYPVSWSPSDSHWARRLSSNLASTSS 803


>ref|XP_002299265.1| predicted protein [Populus trichocarpa] gi|222846523|gb|EEE84070.1|
            predicted protein [Populus trichocarpa]
          Length = 705

 Score =  313 bits (801), Expect = 9e-83
 Identities = 164/280 (58%), Positives = 211/280 (75%)
 Frame = -2

Query: 1382 LRALGAEGMMNDLIHYLRVAENQFSRSNTRLGTPIYNTVLHSLVEAKESRLAVEMFKTMI 1203
            L+ALG EGMM +L+ YL VAE+ F  SNT LG PIYNTVLHSLVEA+E R+A+ +FK M 
Sbjct: 428  LKALGKEGMMRELMQYLGVAEDLFYHSNTHLGIPIYNTVLHSLVEAEECRMAIALFKHMK 487

Query: 1202 ACGYRPDAATYSIMIHCCTTVIRGFKSACALIALMIRDGFCPQVLTYTALIEILLKNKDF 1023
            A G+ P+AATY IMI CC T IR +KSACAL+++M+R GF  Q + YTALI+ILL++++F
Sbjct: 488  ASGFEPNAATYCIMIDCCRT-IRCYKSACALVSMMLRSGFYLQTVGYTALIKILLQDENF 546

Query: 1022 DGALNILDQACSEEIQLDVLLFNTILQAACDEGRLDVVEILVERMHEEKIHPDPSTCGYV 843
            D ALN+LDQ  SEEI+LDVLL+N +L  A D+GR+D++E++VE+MH EKI PD +TC  V
Sbjct: 547  DEALNLLDQGHSEEIKLDVLLYNPVLHVAKDKGRIDIIELIVEQMHREKIQPDTTTCNNV 606

Query: 842  FSAYIENGFFSTAVEALQVLSMRMILADDHSPEEKRDSFXXXXXXXXXXXXESRIIELFK 663
            F+AY+  GF + A+EALQVLSMRMI  +D   EEK+               ESRI+E FK
Sbjct: 607  FTAYVYCGFHNMAMEALQVLSMRMISQEDCVLEEKKAEL-EDLILSEDKEAESRILEHFK 665

Query: 662  DSKENLAVGLLNLRWCAIVGSPISWLPDQSRWAKRLSNSY 543
            D +EN+AV LLNLR CAI+G PISW P++S WA+RLS +Y
Sbjct: 666  DFEENIAVALLNLRNCAILGFPISWSPNKSAWARRLSANY 705


>gb|AAF16672.1|AC012394_21 hypothetical protein; 84465-87513 [Arabidopsis thaliana]
          Length = 558

 Score =  306 bits (785), Expect = 6e-81
 Identities = 152/282 (53%), Positives = 209/282 (74%), Gaps = 1/282 (0%)
 Frame = -2

Query: 1382 LRALGAEGMMNDLIHYLRVAENQFSRSNTRLGTPIYNTVLHSLVEAKESRLAVEMFKTMI 1203
            LRALGAEGM+N++I +L+ AEN  + SN  LGTP YN VLHSL+EA E+ + + +FK M 
Sbjct: 278  LRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANETDMVINIFKRMK 337

Query: 1202 ACGYRPDAATYSIMIHCCTTVIRGFKSACALIALMIRDGFCPQVLTYTALIEILLKNKDF 1023
            +CG   D ATY+IMI CC+ +I  +KSACAL+++MIRDGF P+ +T+TAL++ILL + +F
Sbjct: 338  SCGCPADVATYNIMIDCCS-LIHSYKSACALVSMMIRDGFSPKAVTFTALMKILLNDANF 396

Query: 1022 DGALNILDQACSEEIQLDVLLFNTILQAACDEGRLDVVEILVERMHEEKIHPDPSTCGYV 843
            + ALN+LDQA  EEI LDVL +NTIL+ A ++G +DV+E +VE+MH EK++PDP+TC YV
Sbjct: 397  EEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKVNPDPTTCHYV 456

Query: 842  FSAYIENGFFSTAVEALQVLSMRMILADD-HSPEEKRDSFXXXXXXXXXXXXESRIIELF 666
            FS Y+E G+ +TA+EAL VLS+RM+  +D  S ++K+               E++IIELF
Sbjct: 457  FSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELEENFVMSEDPEAETKIIELF 516

Query: 665  KDSKENLAVGLLNLRWCAIVGSPISWLPDQSRWAKRLSNSYG 540
            + S+E+LA  LLNLRWCA++G  I W  DQS WA+ LSN YG
Sbjct: 517  RKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARALSNKYG 558


Top