BLASTX nr result

ID: Panax21_contig00013325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013325
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38776.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|NP_001240131.1| uncharacterized protein LOC100796509 [Glycin...    96   3e-18
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...    96   4e-18
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]    96   4e-18
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]            96   4e-18

>emb|CBI38776.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/60 (80%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
 Frame = +1

Query: 214 PLTGFAFVYMEDEQDAEAAIRRLDRTEFGRKGRRLRVEWTKQERGIRRPDSS-KRSANTK 390
           P+ GFAFVYM+DE+DAE AIRRLDRT FGRKGR+LRVEWTKQERGIRRP  S K SAN K
Sbjct: 6   PVAGFAFVYMDDERDAEDAIRRLDRTVFGRKGRQLRVEWTKQERGIRRPGGSRKSSANMK 65


>ref|NP_001240131.1| uncharacterized protein LOC100796509 [Glycine max]
           gi|255636874|gb|ACU18770.1| unknown [Glycine max]
          Length = 374

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/54 (81%), Positives = 50/54 (92%)
 Frame = +1

Query: 220 TGFAFVYMEDEQDAEAAIRRLDRTEFGRKGRRLRVEWTKQERGIRRPDSSKRSA 381
           +GFAF+YMEDE+DAEAAIR LDR EFGRKGRRLRVEWTK ERG+RRP SS+RS+
Sbjct: 40  SGFAFIYMEDERDAEAAIRALDRVEFGRKGRRLRVEWTKHERGVRRPASSRRSS 93


>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 480

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +1

Query: 220 TGFAFVYMEDEQDAEAAIRRLDRTEFGRKGRRLRVEWTKQERGIRRPDSSKRSA 381
           TGFAF+YMEDE+DAE AIR LDRT FGRKGRRLRVEWTKQERGIRRP  S+RS+
Sbjct: 37  TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSS 90


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +1

Query: 220 TGFAFVYMEDEQDAEAAIRRLDRTEFGRKGRRLRVEWTKQERGIRRPDSSKRSA 381
           TGFAF+YMEDE+DAE AIR LDRT FGRKGRRLRVEWTKQERGIRRP  S+RS+
Sbjct: 35  TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSS 88


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +1

Query: 220 TGFAFVYMEDEQDAEAAIRRLDRTEFGRKGRRLRVEWTKQERGIRRPDSSKRSA 381
           TGFAF+YMEDE+DAE AIR LDRT FGRKGRRLRVEWTKQERGIRRP  S+RS+
Sbjct: 35  TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSS 88


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