BLASTX nr result

ID: Panax21_contig00013319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013319
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...   589   e-166
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141
ref|XP_002307489.1| f-box family protein [Populus trichocarpa] g...   497   e-138
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub...   486   e-135
ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thalia...   484   e-134

>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score =  589 bits (1518), Expect = e-166
 Identities = 287/375 (76%), Positives = 321/375 (85%), Gaps = 13/375 (3%)
 Frame = -2

Query: 1248 MDSPPIYRLPRDTLHQIFSHLPLRQIAISKSVCKFFNQTLSSSSFTRLISAVQPPLQFLA 1069
            MD+ PIYRLP+DTLH IFS LPLRQI I +SVCKFF QTL++ +F  LIS  QPPL  +A
Sbjct: 1    MDASPIYRLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELIST-QPPLNLIA 59

Query: 1068 LRPPHRH-----------VSPHPTLHVFDPDLNQWLRFPLSFLPFRSHQPVASSLGLVYL 922
            LRPPH H           VS H  LHVFDP  NQW+RFPLSFLPFRS  PVASSLGLVYL
Sbjct: 60   LRPPHHHHHHHHHHHNRDVSSHNALHVFDPSSNQWVRFPLSFLPFRSPTPVASSLGLVYL 119

Query: 921  WADSDDS--SNKSLLVCNPLARSFKILPQLGSAWSRHGSVLVGTPNKVLVLTELAALYFS 748
            WADS +S  SNKSL+VCNPL RSF++LPQLGSAWSRHGSVLVG+PN+VLVLTELA LYFS
Sbjct: 120  WADSLNSLESNKSLIVCNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFS 179

Query: 747  GSDNWLKFSSNLPSKPRSPILISNSVLALCDVGSPWRSQWKLFKITLDSLQSSQPWTSLE 568
            GSD WLKFSSNLPSKPRSPIL+S+SVLALCDVGSPWRSQWKLF  TL+ LQ SQPWT L+
Sbjct: 180  GSDQWLKFSSNLPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLD 239

Query: 567  KHEWGDVFDILKRPRLVKGIGNRILMIGGLKSSFSMNSSCSTILILRLDLETLEWDEAGR 388
            +HEWGDVFDIL+RPRLVKG+GN+ILM+GGLKSSFS+N+ CSTILILRLDL++LEWDE GR
Sbjct: 240  RHEWGDVFDILRRPRLVKGLGNQILMVGGLKSSFSLNAVCSTILILRLDLDSLEWDELGR 299

Query: 387  MPVEMFRCFQESSKFKVFGGGNRVCFSAKRIGKLALWDNSVEAGKAEWKWIVGVPGNGDG 208
            MP EMFRCFQESSKFKVFG GNRVCFSAKR+G+LALWD S E GK +W+WI GVPGNGDG
Sbjct: 300  MPPEMFRCFQESSKFKVFGAGNRVCFSAKRVGRLALWDYSTETGKGDWRWINGVPGNGDG 359

Query: 207  LFRGFLFEAWLSASP 163
            LFRGF+F+A L+A P
Sbjct: 360  LFRGFVFQARLTALP 374


>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score =  506 bits (1304), Expect = e-141
 Identities = 261/380 (68%), Positives = 300/380 (78%), Gaps = 18/380 (4%)
 Frame = -2

Query: 1248 MDSPPIYRLPRDTLHQIFSHLPLRQIAISKSVCKFFNQTLSSSSFTRLISAVQPPLQFLA 1069
            MD  PI RLP+DTLHQIFS LPLRQI I +SVCKFFNQ L+S SF  LIS  QPPL+FLA
Sbjct: 1    MDDSPINRLPQDTLHQIFSSLPLRQIMICRSVCKFFNQMLTSPSFVDLIST-QPPLRFLA 59

Query: 1068 LRPPHRH-----------VSPHPTLHVFDPDLNQWLRFPLSFLPFRSHQPVASSLGLVYL 922
            LRPPH H           VS  P LHVFDPD NQWLRF LSFLPFRS  PVAS+ GL+YL
Sbjct: 60   LRPPHHHHHLHHQRQNSHVSSVPYLHVFDPDQNQWLRFSLSFLPFRSPHPVASASGLIYL 119

Query: 921  WADSDDS--SNKSLLVCNPLARSFKILPQLGSAWSRHGSVLVGTPN-KVLVLTELAALYF 751
            W +S  S  SN+SL+VCNPL R F++LPQLGSAWSRHGSVLV + N +V+VLTELAALYF
Sbjct: 120  WGESPTSIESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYF 179

Query: 750  SGSD---NWLKFSSNLPSKPRSPILISNSVLALCDVGSPWRSQWKLFKITLDSLQSS-QP 583
            S ++   +WL FS+NLPSKPRSPILIS+SV ALCDVGSPWRSQWKLF   L  L ++   
Sbjct: 180  SNTNKTNSWLTFSANLPSKPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNNNYNN 239

Query: 582  WTSLEKHEWGDVFDILKRPRLVKGIGNRILMIGGLKSSFSMNSSCSTILILRLDLETLEW 403
            W  LE+ EWGD+FDI+KRPRLV+G GN++LMIGGLKS+FS+N+SCSTILILRLDLE LEW
Sbjct: 240  WVCLERQEWGDIFDIIKRPRLVRGKGNKLLMIGGLKSNFSLNTSCSTILILRLDLERLEW 299

Query: 402  DEAGRMPVEMFRCFQESSKFKVFGGGNRVCFSAKRIGKLALWDNSVEAGKAEWKWIVGVP 223
            +EAGRMPV+M+R FQESSK KVFGGG+RVCFSAKR+ KLALWD   +     W+WI GVP
Sbjct: 300  EEAGRMPVDMYRSFQESSKLKVFGGGDRVCFSAKRMRKLALWD---DCDGVVWRWIEGVP 356

Query: 222  GNGDGLFRGFLFEAWLSASP 163
              GDGL RGF+FEA  +A P
Sbjct: 357  VGGDGLCRGFVFEAGRTALP 376


>ref|XP_002307489.1| f-box family protein [Populus trichocarpa]
            gi|222856938|gb|EEE94485.1| f-box family protein [Populus
            trichocarpa]
          Length = 374

 Score =  497 bits (1279), Expect = e-138
 Identities = 257/376 (68%), Positives = 300/376 (79%), Gaps = 16/376 (4%)
 Frame = -2

Query: 1248 MDSPPIYRLPRDTLHQIFSHLPLRQIAISKSVCKFFNQTLSSSSFTRLISAVQPPLQFLA 1069
            MD+ PI RLP+DTL+QIFS LPLRQI I +SVCKFFNQ L+S SF  LIS  Q PL+FLA
Sbjct: 1    MDASPINRLPQDTLNQIFSSLPLRQIMICRSVCKFFNQMLTSPSFMDLIST-QTPLRFLA 59

Query: 1068 LRPPHRH---------VSPHPTLHVFDPDLNQWLRFPLSFLPFRSHQPVASSLGLVYLWA 916
            LRPPH H         VS  P LHVFDPD NQWLRF LSFLPFRS QPVAS+ GL+YLW 
Sbjct: 60   LRPPHHHHHHQRHNSHVSSLPYLHVFDPDQNQWLRFSLSFLPFRSPQPVASASGLLYLWG 119

Query: 915  DSDDS--SNKSLLVCNPLARSFKILPQLGSAWSRHGSVLVGTPN-KVLVLTELAALYFSG 745
            +S +S  SN+SL+VCNPL R F++LPQLGSAWSRHGSVLV + N +V+VLTELAALYFS 
Sbjct: 120  ESPNSLESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSN 179

Query: 744  SD---NWLKFSSNLPSKPRSPILISNSVLALCDVGSPWRSQWKLFKITLDSLQSS-QPWT 577
            ++   +WL FS+NLPSKPRSPILIS+SV ALCDVGS WRSQWKLF  TL +L +S   W 
Sbjct: 180  TNKTNSWLTFSANLPSKPRSPILISDSVFALCDVGSRWRSQWKLFTCTLTNLNNSYNNWV 239

Query: 576  SLEKHEWGDVFDILKRPRLVKGIGNRILMIGGLKSSFSMNSSCSTILILRLDLETLEWDE 397
             L + EWGD+FDI+KRPRLV+G GN++LMIG LKS+FS+N SCSTILILRLDL  +EW+E
Sbjct: 240  CLGRLEWGDIFDIIKRPRLVRGKGNKLLMIGVLKSNFSLNPSCSTILILRLDLARMEWEE 299

Query: 396  AGRMPVEMFRCFQESSKFKVFGGGNRVCFSAKRIGKLALWDNSVEAGKAEWKWIVGVPGN 217
            AGRMP EM++ FQESSKFK+FGGG+RVC SAKR+GKLALWD   +     W+WI GVPG 
Sbjct: 300  AGRMPSEMYKSFQESSKFKIFGGGDRVCLSAKRVGKLALWD---DCDGVVWRWIEGVPGG 356

Query: 216  GDGLFRGFLFEAWLSA 169
            GDGL RGF+FEA L+A
Sbjct: 357  GDGLCRGFVFEASLTA 372


>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333503|gb|EFH63921.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score =  486 bits (1250), Expect = e-135
 Identities = 247/380 (65%), Positives = 294/380 (77%), Gaps = 18/380 (4%)
 Frame = -2

Query: 1248 MDSPPIYRLPRDTLHQIFSHLPLRQIAISKSVCKFFNQTLSSSSFTRLISAVQPPLQFLA 1069
            M+S PI RLP D+LHQIFS LPLR I + +SVCKFFNQ L+S  F  +IS  +PPL  LA
Sbjct: 1    MESSPINRLPPDSLHQIFSSLPLRDIMVCRSVCKFFNQLLTSQCFIEIIST-RPPLNLLA 59

Query: 1068 LRPPHRHVSPH-----------PTLHVFDPDLNQWLRFPLSFLPFRSHQPVASSLGLVYL 922
            LRPPH H S             P +HV+DP+ NQW RF L FLPFRS QPVASS GL+YL
Sbjct: 60   LRPPHHHHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYL 119

Query: 921  WADSDD--SSNKSLLVCNPLARSFKILPQLGSAWSRHGSVLVGTPNKVLVLTELAALYFS 748
            W DS D   S+KSL+ CNPL R FK+LPQLGSAWSRHG+VLV + N+V+VLTELAALY+S
Sbjct: 120  WGDSIDLAESSKSLVACNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYS 179

Query: 747  GS---DNWLKFSSNLPSKPRSPILISNSVLALCDVGSPWRSQWKLFKITLDSLQSSQP-W 580
            G+   + W KFSSNLPSKPRSP+L+S+SV ALCDVGSPWRSQWKLF   L +L  +   W
Sbjct: 180  GTVVANQWFKFSSNLPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNW 239

Query: 579  TSLEKHEWGDVFDILKRPRLVKGIGN-RILMIGGLKSSFSMNSSCSTILILRLDLETLEW 403
              LEKHEWGD+FDI+KRPRL++G G+ ++LMIGGLKS+FS+N +CSTILILRLDLE+LEW
Sbjct: 240  VCLEKHEWGDIFDIIKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEW 299

Query: 402  DEAGRMPVEMFRCFQESSKFKVFGGGNRVCFSAKRIGKLALWDNSVEAGKAEWKWIVGVP 223
            +EAGRMP+EM+R FQESSKFKVFGGG+RV FSAKR+GKLA+WD         W+WI GVP
Sbjct: 300  EEAGRMPLEMYRGFQESSKFKVFGGGDRVYFSAKRMGKLAMWD-----CWEGWRWIDGVP 354

Query: 222  GNGDGLFRGFLFEAWLSASP 163
            G  DGL RGF+F+A L+  P
Sbjct: 355  GYADGLCRGFVFDAKLTMMP 374


>ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thaliana]
            gi|75098682|sp|O49279.1|SKI15_ARATH RecName:
            Full=SKP1-interacting partner 15; AltName: Full=F-box
            only protein 3 gi|2829924|gb|AAC00632.1| Unknown protein
            [Arabidopsis thaliana] gi|17473630|gb|AAL38278.1| unknown
            protein [Arabidopsis thaliana] gi|21553606|gb|AAM62699.1|
            F-box protein AtFBX3 [Arabidopsis thaliana]
            gi|30725584|gb|AAP37814.1| At1g76920 [Arabidopsis
            thaliana] gi|332197782|gb|AEE35903.1| SKP1-interacting
            partner 15 [Arabidopsis thaliana]
          Length = 374

 Score =  484 bits (1245), Expect = e-134
 Identities = 246/380 (64%), Positives = 294/380 (77%), Gaps = 18/380 (4%)
 Frame = -2

Query: 1248 MDSPPIYRLPRDTLHQIFSHLPLRQIAISKSVCKFFNQTLSSSSFTRLISAVQPPLQFLA 1069
            M+S P+  LP D+LHQIFS LP+R I I +SVCKFFNQ L+S  F  +IS  +PPL  LA
Sbjct: 1    MESSPVNCLPPDSLHQIFSSLPIRDIMICRSVCKFFNQLLTSQCFIEIIST-RPPLNLLA 59

Query: 1068 LRPPHRHVSPH-----------PTLHVFDPDLNQWLRFPLSFLPFRSHQPVASSLGLVYL 922
            LRPPH H S             P +HV+DP+ NQW RF L FLPFRS QPVASS GL+YL
Sbjct: 60   LRPPHHHHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYL 119

Query: 921  WADSDD--SSNKSLLVCNPLARSFKILPQLGSAWSRHGSVLVGTPNKVLVLTELAALYFS 748
            W DS D   S+KSL+ CNPL R FK+LPQLGSAWSRHG+VLV + N+V+VLTELAALY+S
Sbjct: 120  WGDSIDLAESSKSLVACNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYS 179

Query: 747  GS---DNWLKFSSNLPSKPRSPILISNSVLALCDVGSPWRSQWKLFKITLDSLQSSQP-W 580
            G+   + WLKFSSNLPSKPRSP+L+S+SV ALCDVGSPWRSQWKLF   L +L  +   W
Sbjct: 180  GTVVANQWLKFSSNLPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNW 239

Query: 579  TSLEKHEWGDVFDILKRPRLVKGIGN-RILMIGGLKSSFSMNSSCSTILILRLDLETLEW 403
              LEKHEWGD+FDI+KRPRL++G G+ ++LMIGGLKS+FS+N +CSTILILRLDLE+LEW
Sbjct: 240  VCLEKHEWGDIFDIIKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEW 299

Query: 402  DEAGRMPVEMFRCFQESSKFKVFGGGNRVCFSAKRIGKLALWDNSVEAGKAEWKWIVGVP 223
            +EAGRMP+EM+R FQESSKFKVFGGG+RV FSAKR+GKLA+WD         W+WI GVP
Sbjct: 300  EEAGRMPLEMYRGFQESSKFKVFGGGDRVYFSAKRMGKLAMWD-----CWQGWRWIEGVP 354

Query: 222  GNGDGLFRGFLFEAWLSASP 163
            G  DGL RGF+F+A L+  P
Sbjct: 355  GYADGLCRGFVFDAKLTLMP 374


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