BLASTX nr result

ID: Panax21_contig00013318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013318
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subs...    94   2e-37
ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [...    94   2e-37
ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [...    94   2e-37
ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [...    94   2e-37
ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [...    94   2e-37

>gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
          Length = 222

 Score = 93.6 bits (231), Expect(2) = 2e-37
 Identities = 50/68 (73%), Positives = 50/68 (73%)
 Frame = +1

Query: 175 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQ 354
           LIKLLLIGDSGVGKSCLLLR                  KIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 355 ERFRTITT 378
           ERFRTITT
Sbjct: 75  ERFRTITT 82



 Score = 88.2 bits (217), Expect(2) = 2e-37
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 471 ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 596
           ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM
Sbjct: 91  ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132


>ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
          Length = 221

 Score = 93.6 bits (231), Expect(2) = 2e-37
 Identities = 50/68 (73%), Positives = 50/68 (73%)
 Frame = +1

Query: 175 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQ 354
           LIKLLLIGDSGVGKSCLLLR                  KIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 355 ERFRTITT 378
           ERFRTITT
Sbjct: 75  ERFRTITT 82



 Score = 88.2 bits (217), Expect(2) = 2e-37
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 471 ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 596
           ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM
Sbjct: 91  ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132


>ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
           gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related
           protein RABE1c-like [Cucumis sativus]
          Length = 216

 Score = 93.6 bits (231), Expect(2) = 2e-37
 Identities = 50/68 (73%), Positives = 50/68 (73%)
 Frame = +1

Query: 175 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQ 354
           LIKLLLIGDSGVGKSCLLLR                  KIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 355 ERFRTITT 378
           ERFRTITT
Sbjct: 75  ERFRTITT 82



 Score = 88.2 bits (217), Expect(2) = 2e-37
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 471 ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 596
           ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM
Sbjct: 91  ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132


>ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
           gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related
           protein RABE1a-like [Cucumis sativus]
          Length = 216

 Score = 93.6 bits (231), Expect(2) = 2e-37
 Identities = 50/68 (73%), Positives = 50/68 (73%)
 Frame = +1

Query: 175 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQ 354
           LIKLLLIGDSGVGKSCLLLR                  KIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 355 ERFRTITT 378
           ERFRTITT
Sbjct: 75  ERFRTITT 82



 Score = 88.2 bits (217), Expect(2) = 2e-37
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 471 ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 596
           ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM
Sbjct: 91  ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132


>ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
          Length = 216

 Score = 93.6 bits (231), Expect(2) = 2e-37
 Identities = 50/68 (73%), Positives = 50/68 (73%)
 Frame = +1

Query: 175 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQ 354
           LIKLLLIGDSGVGKSCLLLR                  KIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 355 ERFRTITT 378
           ERFRTITT
Sbjct: 75  ERFRTITT 82



 Score = 88.2 bits (217), Expect(2) = 2e-37
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 471 ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 596
           ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM
Sbjct: 91  ILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132


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