BLASTX nr result

ID: Panax21_contig00013302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013302
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330857.1| predicted protein [Populus trichocarpa] gi|2...    45   3e-06
pir||T08861 hypothetical protein A_TM017A05.3 - Arabidopsis thal...    39   5e-06

>ref|XP_002330857.1| predicted protein [Populus trichocarpa] gi|222872679|gb|EEF09810.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 28/84 (33%), Positives = 41/84 (48%)
 Frame = +1

Query: 337 HSFHPEHSLTLTNTPKRSNEFPRCNACGNFINSTYSYRCFDCDNFFMLDLKCATLVPLID 516
           H+ HP+H L L ++P   +    CNACG++  ++++Y C  C   F L + CA L   + 
Sbjct: 75  HTSHPQHLLVLLSSPPGDDSKFTCNACGDY-GTSFAYHCATCQ--FNLHVGCAFLPKTM- 130

Query: 517 XXXXXXXXXXHQHPLILCEQSINF 588
                     H HPL L   S NF
Sbjct: 131 ------KHVDHNHPLTL-SYSTNF 147



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +3

Query: 123 REMSRHFSHEHNQLKLRHQAGTIRGKLCCEICGEEVYDNEVHFSCGYRHSYSRTTCKFGL 302
           R   +HFSH H    LR        +  C  C       E+  S G  +  +++TC F L
Sbjct: 14  RPCVKHFSHSH---PLRPVDVKEEEESICSGC-------ELDLS-GSAYKCTKSTCDFFL 62

Query: 303 HKTCKDFPRVL 335
           HK+C + PR L
Sbjct: 63  HKSCFELPREL 73


>pir||T08861 hypothetical protein A_TM017A05.3 - Arabidopsis thaliana
          Length = 457

 Score = 39.3 bits (90), Expect(2) = 5e-06
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +1

Query: 337 HSFHPEHSLTLTNTPKRSNEFPRCNACGNFINSTYSYRCFDC 462
           H  HP+H L L  +P+ +N    C+ACG +  S ++Y C  C
Sbjct: 274 HKSHPDHPLILLYSPQNNNSTYTCDACGEY-GSGFTYNCSIC 314



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 23/76 (30%), Positives = 34/76 (44%)
 Frame = +3

Query: 102 ISPNRESREMSRHFSHEHNQLKLRHQAGTIRGKLCCEICGEEVYDNEVHFSCGYRHSYSR 281
           I P   SR   RH SH H    LR     +  ++ C  C  ++     +F C      ++
Sbjct: 206 ILPLMASRPSVRHPSHNH---PLRGHKAQVEDEIICSGCDLDLLG--AYFKC------TK 254

Query: 282 TTCKFGLHKTCKDFPR 329
           + C + LHK+C D PR
Sbjct: 255 SECDYFLHKSCFDLPR 270


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