BLASTX nr result
ID: Panax21_contig00013302
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00013302 (617 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330857.1| predicted protein [Populus trichocarpa] gi|2... 45 3e-06 pir||T08861 hypothetical protein A_TM017A05.3 - Arabidopsis thal... 39 5e-06 >ref|XP_002330857.1| predicted protein [Populus trichocarpa] gi|222872679|gb|EEF09810.1| predicted protein [Populus trichocarpa] Length = 190 Score = 45.1 bits (105), Expect(2) = 3e-06 Identities = 28/84 (33%), Positives = 41/84 (48%) Frame = +1 Query: 337 HSFHPEHSLTLTNTPKRSNEFPRCNACGNFINSTYSYRCFDCDNFFMLDLKCATLVPLID 516 H+ HP+H L L ++P + CNACG++ ++++Y C C F L + CA L + Sbjct: 75 HTSHPQHLLVLLSSPPGDDSKFTCNACGDY-GTSFAYHCATCQ--FNLHVGCAFLPKTM- 130 Query: 517 XXXXXXXXXXHQHPLILCEQSINF 588 H HPL L S NF Sbjct: 131 ------KHVDHNHPLTL-SYSTNF 147 Score = 31.6 bits (70), Expect(2) = 3e-06 Identities = 23/71 (32%), Positives = 32/71 (45%) Frame = +3 Query: 123 REMSRHFSHEHNQLKLRHQAGTIRGKLCCEICGEEVYDNEVHFSCGYRHSYSRTTCKFGL 302 R +HFSH H LR + C C E+ S G + +++TC F L Sbjct: 14 RPCVKHFSHSH---PLRPVDVKEEEESICSGC-------ELDLS-GSAYKCTKSTCDFFL 62 Query: 303 HKTCKDFPRVL 335 HK+C + PR L Sbjct: 63 HKSCFELPREL 73 >pir||T08861 hypothetical protein A_TM017A05.3 - Arabidopsis thaliana Length = 457 Score = 39.3 bits (90), Expect(2) = 5e-06 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 337 HSFHPEHSLTLTNTPKRSNEFPRCNACGNFINSTYSYRCFDC 462 H HP+H L L +P+ +N C+ACG + S ++Y C C Sbjct: 274 HKSHPDHPLILLYSPQNNNSTYTCDACGEY-GSGFTYNCSIC 314 Score = 36.6 bits (83), Expect(2) = 5e-06 Identities = 23/76 (30%), Positives = 34/76 (44%) Frame = +3 Query: 102 ISPNRESREMSRHFSHEHNQLKLRHQAGTIRGKLCCEICGEEVYDNEVHFSCGYRHSYSR 281 I P SR RH SH H LR + ++ C C ++ +F C ++ Sbjct: 206 ILPLMASRPSVRHPSHNH---PLRGHKAQVEDEIICSGCDLDLLG--AYFKC------TK 254 Query: 282 TTCKFGLHKTCKDFPR 329 + C + LHK+C D PR Sbjct: 255 SECDYFLHKSCFDLPR 270