BLASTX nr result

ID: Panax21_contig00013295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013295
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867094.1| hypothetical protein ARALYDRAFT_912880 [Arab...   328   e-135
ref|XP_002278931.1| PREDICTED: WD-40 repeat-containing protein M...   389   e-111
ref|NP_001237595.1| MSI1 [Glycine max] gi|158198571|gb|ABW23439....   276   e-109
ref|XP_003524806.1| PREDICTED: WD-40 repeat-containing protein M...   275   e-108
ref|NP_001085185.1| histone-binding protein RBBP4-B [Xenopus lae...   265   e-108

>ref|XP_002867094.1| hypothetical protein ARALYDRAFT_912880 [Arabidopsis lyrata subsp.
            lyrata] gi|297312930|gb|EFH43353.1| hypothetical protein
            ARALYDRAFT_912880 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score =  328 bits (840), Expect(2) = e-135
 Identities = 160/253 (63%), Positives = 191/253 (75%), Gaps = 5/253 (1%)
 Frame = -2

Query: 1237 QVEEEFSVWKKNTPFLYDLIISHALEWPSLTVHWLSSPPSPYA-DGSFAVHKMILGTHTS 1061
            QVEEEFSVWK+NTPFLYDL+ISH LEWPSLT+HW+ S P PYA D  FAVHK+ILGTHTS
Sbjct: 14   QVEEEFSVWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYAKDPYFAVHKLILGTHTS 73

Query: 1060 DDFPNFLIVADAHLPVNPASAPETNL----ENPNIPKVEIAQKIHVDGEVNRARCMLQNP 893
                +FL+VAD  +P   A   E  L    + P +PKVEI QKI VDGEVNRARCM Q P
Sbjct: 74   GGAQDFLMVADVVIPTPDA---EPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKP 130

Query: 892  SIVAAKTSSCEVYVFDCTKQPMNHEGGSCDPDLRLRGHDKEGYGLSWSPFKEGYLLSGSN 713
            ++V AKTS  EV++FD  +     +   CDPDLRL GH++EGYGL+WS FKEGYLLSGS 
Sbjct: 131  TLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQ 190

Query: 712  DCKICLWDVSTLPQDKVLDACNVYEDHGSLVNDVSWHLKNESLFGSVGDDCRLMIWDLRT 533
            D +ICLWDVS    DKVL+  +VYE H S++ DV+WH+KNE++FGSVGDDC+L+IWDLRT
Sbjct: 191  DQRICLWDVSATASDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSVGDDCQLVIWDLRT 250

Query: 532  NNPQQSVVVHEKE 494
            N  Q  V VHE+E
Sbjct: 251  NQMQHQVKVHERE 263



 Score =  182 bits (463), Expect(2) = e-135
 Identities = 86/102 (84%), Positives = 93/102 (91%), Gaps = 2/102 (1%)
 Frame = -3

Query: 501 RKREEVFQVEWDPNHETVLASSSSDRRLMVWDLNRIGDEQLEGE--AEDGPPELLFSHGG 328
           R   EVFQVEWDPNHETVLASS  DRRLMVWD+NR+GDEQLE E  AEDGPPELLFSHGG
Sbjct: 303 RHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGG 362

Query: 327 HKAKLSDFSWNKNEPWVISSVAEDNSLQVWHMAESIYREDED 202
           HKAK+SDF+WNK+EPWVISSVAEDNSLQVW MAESIYRED++
Sbjct: 363 HKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDE 404



 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
 Frame = -2

Query: 904 LQNPSIVAAKTSSCEVYVFDCTKQPMNHEGGSCDPDLRLRGHDKEGYGLSWSPFKEGYLL 725
           ++N +I  +    C++ ++D     M H+         ++ H++E   LS++PF E  L 
Sbjct: 228 MKNENIFGSVGDDCQLVIWDLRTNQMQHQ---------VKVHEREINYLSFNPFNEWVLA 278

Query: 724 SGSNDCKICLWDVSTLPQDKVLDACNVYEDHGSLVNDVSWHLKNESLFGSVGDDCRLMIW 545
           + S+D  + L+D+      K+    +V   H   V  V W   +E++  S G+D RLM+W
Sbjct: 279 TASSDSTVALFDLR-----KLTAPLHVLSRHEGEVFQVEWDPNHETVLASSGEDRRLMVW 333

Query: 544 DL-RTNNPQQSVVVHEKEG 491
           D+ R  + Q  + +  ++G
Sbjct: 334 DINRVGDEQLEIELDAEDG 352


>ref|XP_002278931.1| PREDICTED: WD-40 repeat-containing protein MSI2 [Vitis vinifera]
            gi|297744608|emb|CBI37870.3| unnamed protein product
            [Vitis vinifera]
          Length = 401

 Score =  389 bits (1000), Expect(2) = e-111
 Identities = 185/248 (74%), Positives = 209/248 (84%)
 Frame = -2

Query: 1237 QVEEEFSVWKKNTPFLYDLIISHALEWPSLTVHWLSSPPSPYADGSFAVHKMILGTHTSD 1058
            QVEEEF+VWKKNTPFLYDLIISH LEWPSLTV +L SPP PYA  SF+VHK++LGTHTSD
Sbjct: 10   QVEEEFTVWKKNTPFLYDLIISHPLEWPSLTVQFLPSPPLPYALDSFSVHKLVLGTHTSD 69

Query: 1057 DFPNFLIVADAHLPVNPASAPETNLENPNIPKVEIAQKIHVDGEVNRARCMLQNPSIVAA 878
             FPN+L+VADA LP N A+  E   +NP IPKVEI +KIHVDGEVNRARCM QNP +VAA
Sbjct: 70   GFPNYLMVADAFLPRNTAAPSE---QNPTIPKVEITKKIHVDGEVNRARCMPQNPDMVAA 126

Query: 877  KTSSCEVYVFDCTKQPMNHEGGSCDPDLRLRGHDKEGYGLSWSPFKEGYLLSGSNDCKIC 698
            KTS  EVYVF+C K P+  EG SC+PDLRLRGH+KEGYGLSWS FK GY+LSGSNDCK+C
Sbjct: 127  KTSGLEVYVFNCQKPPVGGEGRSCNPDLRLRGHEKEGYGLSWSSFKGGYVLSGSNDCKVC 186

Query: 697  LWDVSTLPQDKVLDACNVYEDHGSLVNDVSWHLKNESLFGSVGDDCRLMIWDLRTNNPQQ 518
            LWDVS   +DKVL A +VYE H ++V DVSWHLKNE+LFGSVGDDCRLMIWDLR + PQ 
Sbjct: 187  LWDVSASAEDKVLGAMHVYEAHENVVEDVSWHLKNENLFGSVGDDCRLMIWDLRLDKPQH 246

Query: 517  SVVVHEKE 494
            SV+VHEKE
Sbjct: 247  SVIVHEKE 254



 Score = 38.9 bits (89), Expect(2) = e-111
 Identities = 23/87 (26%), Positives = 46/87 (52%)
 Frame = -3

Query: 492 EEVFQVEWDPNHETVLASSSSDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGGHKAKL 313
           +EV  + ++P +E +LA++SSD  + ++D+ ++          + P  +L SH     ++
Sbjct: 253 KEVNFLSFNPYNEWILATASSDTTVGLFDMRKL----------NSPLHVLSSH---TEEV 299

Query: 312 SDFSWNKNEPWVISSVAEDNSLQVWHM 232
               W+ N   V++S A+D  L VW +
Sbjct: 300 FQVEWDPNHETVLASSADDRRLMVWDL 326



 Score =  184 bits (466), Expect = 5e-44
 Identities = 82/96 (85%), Positives = 91/96 (94%)
 Frame = -3

Query: 492 EEVFQVEWDPNHETVLASSSSDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGGHKAKL 313
           EEVFQVEWDPNHETVLASS+ DRRLMVWDLNRIG+EQLEG+A DGPPELLFSHGGHKAK+
Sbjct: 297 EEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGEEQLEGDAADGPPELLFSHGGHKAKI 356

Query: 312 SDFSWNKNEPWVISSVAEDNSLQVWHMAESIYREDE 205
           SDFSWNKNEPWVISSVAEDN+LQ+W M E IYR+++
Sbjct: 357 SDFSWNKNEPWVISSVAEDNTLQIWKMTEGIYRDED 392


>ref|NP_001237595.1| MSI1 [Glycine max] gi|158198571|gb|ABW23439.1| MSI1 [Glycine max]
          Length = 425

 Score =  276 bits (707), Expect(2) = e-109
 Identities = 139/260 (53%), Positives = 186/260 (71%), Gaps = 13/260 (5%)
 Frame = -2

Query: 1234 VEEEFSVWKKNTPFLYDLIISHALEWPSLTVHWLSSPPSPYADGSFAVHKMILGTHTSDD 1055
            + EE+ +WKKN+PFLYDL+I HALEWPSLTV WL     P     +++ K+ILGTHTS++
Sbjct: 17   INEEYKIWKKNSPFLYDLVIMHALEWPSLTVEWLPDRHEPPGK-DYSLQKVILGTHTSEN 75

Query: 1054 FPNFLIVADAHLPVNPAS--APETNLENPNIP-------KVEIAQKIHVDGEVNRARCML 902
             PN+L++A   LP++ A   A   + + P+I        KV+I Q+I+ +GEVNRAR M 
Sbjct: 76   EPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQIIQQINHEGEVNRARYMP 135

Query: 901  QNPSIVAAKTSSCEVYVFDCTKQPMNHE-GGSCDPDLRLRGHDKEGYGLSWSPFKEGYLL 725
            QNP I+A KT S EVYVFD +K P      G+C+PDLRLRGH+ EGYGLSWS FK+G+LL
Sbjct: 136  QNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTEGYGLSWSKFKQGHLL 195

Query: 724  SGSNDCKICLWDVSTLPQDKVLDACNVYEDHGSLVNDVSWHLKNESLFGSVGDDCRLMIW 545
            SGS+D +ICLWD++  P++K L+A  +++ H  +V DV+WHL++E LFGSVGDD  L+IW
Sbjct: 196  SGSDDAQICLWDINGTPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255

Query: 544  DLRT---NNPQQSVVVHEKE 494
            DLRT   + P QSVV H+ E
Sbjct: 256  DLRTPAASKPVQSVVAHQSE 275



 Score =  145 bits (365), Expect(2) = e-109
 Identities = 65/103 (63%), Positives = 82/103 (79%)
 Frame = -3

Query: 507 FMRKREEVFQVEWDPNHETVLASSSSDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGG 328
           F   +EEVFQV W+P +ET+LAS    RRLMVWDL+RI +EQ   +AEDGPPELLF HGG
Sbjct: 313 FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSPEDAEDGPPELLFIHGG 372

Query: 327 HKAKLSDFSWNKNEPWVISSVAEDNSLQVWHMAESIYREDEDM 199
           H +K+SDFSWN  E WV++SVAEDN LQ+W MAE+IY +++D+
Sbjct: 373 HTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDL 415


>ref|XP_003524806.1| PREDICTED: WD-40 repeat-containing protein MSI1-like [Glycine max]
          Length = 425

 Score =  275 bits (704), Expect(2) = e-108
 Identities = 139/260 (53%), Positives = 185/260 (71%), Gaps = 13/260 (5%)
 Frame = -2

Query: 1234 VEEEFSVWKKNTPFLYDLIISHALEWPSLTVHWLSSPPSPYADGSFAVHKMILGTHTSDD 1055
            + EE+ +WKKN+PFLYDL+I HALEWPSLTV WL     P     +++ K+ILGTHTS++
Sbjct: 17   INEEYKIWKKNSPFLYDLVIMHALEWPSLTVEWLPDRHEPPGK-DYSLQKVILGTHTSEN 75

Query: 1054 FPNFLIVADAHLPVNPAS--APETNLENPNIP-------KVEIAQKIHVDGEVNRARCML 902
             PN+L++A   LP++ A   A   + + P+I        KV+I Q+I+ +GEVNRAR M 
Sbjct: 76   EPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQIIQQINHEGEVNRARYMP 135

Query: 901  QNPSIVAAKTSSCEVYVFDCTKQPMNHE-GGSCDPDLRLRGHDKEGYGLSWSPFKEGYLL 725
            QNP I+A KT S EVYVFD +K P      G C+PDLRLRGH+ EGYGLSWS FK+G+LL
Sbjct: 136  QNPFIIATKTVSAEVYVFDYSKHPSKPPLDGFCNPDLRLRGHNTEGYGLSWSKFKQGHLL 195

Query: 724  SGSNDCKICLWDVSTLPQDKVLDACNVYEDHGSLVNDVSWHLKNESLFGSVGDDCRLMIW 545
            SGS+D +ICLWD++  P++K L+A  +++ H  +V DV+WHL++E LFGSVGDD  L+IW
Sbjct: 196  SGSDDAQICLWDINGTPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255

Query: 544  DLRT---NNPQQSVVVHEKE 494
            DLRT   + P QSVV H+ E
Sbjct: 256  DLRTPAASKPVQSVVAHQSE 275



 Score =  145 bits (365), Expect(2) = e-108
 Identities = 65/103 (63%), Positives = 82/103 (79%)
 Frame = -3

Query: 507 FMRKREEVFQVEWDPNHETVLASSSSDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGG 328
           F   +EEVFQV W+P +ET+LAS    RRLMVWDL+RI +EQ   +AEDGPPELLF HGG
Sbjct: 313 FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSPEDAEDGPPELLFIHGG 372

Query: 327 HKAKLSDFSWNKNEPWVISSVAEDNSLQVWHMAESIYREDEDM 199
           H +K+SDFSWN  E WV++SVAEDN LQ+W MAE+IY +++D+
Sbjct: 373 HTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDL 415


>ref|NP_001085185.1| histone-binding protein RBBP4-B [Xenopus laevis]
            gi|82236756|sp|Q6INH0.3|RBP4B_XENLA RecName:
            Full=Histone-binding protein RBBP4-B; AltName:
            Full=Retinoblastoma-binding protein 4-B; Short=RBBP-4-B;
            AltName: Full=Retinoblastoma-binding protein p48-B
            gi|47937750|gb|AAH72311.1| MGC82618 protein [Xenopus
            laevis]
          Length = 425

 Score =  265 bits (678), Expect(2) = e-108
 Identities = 137/262 (52%), Positives = 177/262 (67%), Gaps = 15/262 (5%)
 Frame = -2

Query: 1234 VEEEFSVWKKNTPFLYDLIISHALEWPSLTVHWLSSPPSPYADGS-FAVHKMILGTHTSD 1058
            + EE+ +WKKNTPFLYDL+++HALEWPSLT  WL     P  DG  F++H+++LGTHTSD
Sbjct: 17   INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRP--DGKDFSIHRLVLGTHTSD 74

Query: 1057 DFPNFLIVADAHLPVNPASAPETNLENPN---------IPKVEIAQKIHVDGEVNRARCM 905
            +  N L++A   LP + A    ++ ++             K+EI  KI+ +GEVNRAR M
Sbjct: 75   E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133

Query: 904  LQNPSIVAAKTSSCEVYVFDCTKQPMNHE-GGSCDPDLRLRGHDKEGYGLSWSPFKEGYL 728
             QNP I+A KT SC+V VFD TK P   +  G C+PDLRLRGH KEGYGLSW+P   G L
Sbjct: 134  PQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNL 193

Query: 727  LSGSNDCKICLWDVSTLPQD-KVLDACNVYEDHGSLVNDVSWHLKNESLFGSVGDDCRLM 551
            LS S+D  ICLWD+S +P++ KV+DA  ++  H ++V DVSWHL +ESLFGSV DD +LM
Sbjct: 194  LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253

Query: 550  IWDLRTNN---PQQSVVVHEKE 494
            IWD R+NN   P  SV  H  E
Sbjct: 254  IWDTRSNNTSKPSHSVDAHTAE 275



 Score =  153 bits (386), Expect(2) = e-108
 Identities = 66/101 (65%), Positives = 85/101 (84%)
 Frame = -3

Query: 507 FMRKREEVFQVEWDPNHETVLASSSSDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGG 328
           F   ++E+FQV+W P++ET+LASS +DRRL VWDL++IG+EQ   +AEDGPPELLF HGG
Sbjct: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 372

Query: 327 HKAKLSDFSWNKNEPWVISSVAEDNSLQVWHMAESIYREDE 205
           H AK+SDFSWN NEPWVI SV+EDN +QVW MAE+IY +++
Sbjct: 373 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413


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