BLASTX nr result

ID: Panax21_contig00013293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013293
         (1523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26125.3| unnamed protein product [Vitis vinifera]              119   2e-24
emb|CBI26124.3| unnamed protein product [Vitis vinifera]              103   9e-20
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...    75   6e-11
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...    74   8e-11
ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...    67   2e-08

>emb|CBI26125.3| unnamed protein product [Vitis vinifera]
          Length = 1224

 Score =  119 bits (299), Expect = 2e-24
 Identities = 87/240 (36%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
 Frame = +1

Query: 808  SKQQNEAQKL---MQSEASKVHTFDGFAGLDTSLTEKSYDSAQNKQGTSSSVAVDVATNS 978
            S+Q+N++Q+L   +Q +A K+H  D  AG     TE+   SA+N +  SSS   D A   
Sbjct: 3    SEQENDSQELESTLQEQACKIHGSDVLAGQTLESTEQLNYSAENLKEASSSTTHDCAARL 62

Query: 979  PDNASANVKVSQLDASVNSRDGTLSTKMESCESSADPSTIEIHDAGVKDVAPPIKEVTSD 1158
             +  S  ++VS++DAS+ S++ TL T++++C+++ D +   I  A   DVA   K+VTS+
Sbjct: 63   LEKVSVCLEVSEVDASLKSKEETLPTEIQACQNNVDHALESIQTADANDVASLTKKVTSE 122

Query: 1159 TRSSEVKICQSSSIEGGDALTLGVSKSSLLEASVTQSLDSKTYSTLLT-LGTESVCDLTI 1335
              S+E K   S + E GDA T  VS  +L E +  QSL+ +T ST+ T +    V D  +
Sbjct: 123  ICSTETKFDVSFASEIGDAPT--VSNKTLSEVTKKQSLEDETCSTMPTFVAATPVVDPPV 180

Query: 1336 GMCGTQSGKEGVEKVEEMIRAPSGEIVTPNPEIDYSESKRKADVLVSSTTVSEQLSDIRS 1515
                  SGKEG  +VEE   A   E +   PE+  S SK  A     + T SE+L D+ S
Sbjct: 181  DNDENPSGKEGNAEVEENEDAVLDEALVSKPEVSESHSKVSAG-STGNMTDSEKLIDVSS 239


>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  103 bits (258), Expect = 9e-20
 Identities = 72/184 (39%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
 Frame = +1

Query: 436  GIRGSTHDLSVGTSGSQTTLPLLHVPTNSQSVSV----------GIDPSSQPNPPF-SVP 582
            G +  + DL   +SG+ ++LP+   PT   +V V          GI PSSQP PP  SV 
Sbjct: 2051 GSQNKSGDLVGASSGTVSSLPVAPGPTPVSAVKVISGTMHHFGVGIAPSSQPVPPSPSVA 2110

Query: 583  LGPQSGPPSHSVPKQVKGRGRKAQSEVEAPRRRGRKQGAVTTVVPDRSVGQESTSIEPPE 762
               QS PP  + P +VKG+ +KAQS   APRRRG+KQ  +    PD   GQ   S E  +
Sbjct: 2111 PSSQSTPPCPTAPVRVKGQSQKAQSGAGAPRRRGKKQCPIPPGAPDSLAGQVPKSSEKAQ 2170

Query: 763  KKSRVSGGGKAIATRSKQQNEAQKL---MQSEASKVHTFDGFAGLDTSLTEKSYDSAQNK 933
             KS    G KAIA  S+Q+ ++++L   +Q +A K+ T +  AG+D   T++   SAQNK
Sbjct: 2171 SKSGDLLGSKAIAVGSEQEKDSRELANAIQQKACKIPTSNVLAGVDLKSTKQPDYSAQNK 2230

Query: 934  QGTS 945
               S
Sbjct: 2231 NQES 2234



 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 81/257 (31%), Positives = 106/257 (41%), Gaps = 4/257 (1%)
 Frame = +1

Query: 25   TLPSASPGTQSTAIPCPSVPIPDKRRGRKAHQSGGETPRRRGRKPSAVSSATSVLPSPPG 204
            +LP   PG+QST +P  SVP+  K +GRKA QSGGE PRRRG+K ++V         PP 
Sbjct: 1847 SLPPVPPGSQST-VPDSSVPVQVKGQGRKA-QSGGEGPRRRGKKQASV---------PPA 1895

Query: 205  TDNSTVRSQGEIFSSSPFASGPDLIYGLVSAKAVSKEADXXXXXXXXXXXXGTVKLGIES 384
              ++      ++   S                                   G  KL   S
Sbjct: 1896 VPDALAGQDPKLNEQSQ-------------------------------NKLGDPKLNEPS 1924

Query: 385  QEPVXXXXXXXXXXXXTG---IRGSTHDLSVGTSGSQTTLPLLHVPTNSQSVSVGIDPSS 555
            Q  +            TG   +  S+   + G      +  +  +    Q   VGI PSS
Sbjct: 1925 QNKLGDPKLNEQSHNNTGDSILTASSFPTTPGPDSVPASTTVKSISGTVQHFGVGIAPSS 1984

Query: 556  QPNPPFS-VPLGPQSGPPSHSVPKQVKGRGRKAQSEVEAPRRRGRKQGAVTTVVPDRSVG 732
            Q  PP   V    +S PP   V  QVKG+GRK QS  EAPRRRGRKQ  +   VP   VG
Sbjct: 1985 QAAPPLHLVASDSKSTPPCPPVVTQVKGQGRKTQSGAEAPRRRGRKQALLPPAVPGGLVG 2044

Query: 733  QESTSIEPPEKKSRVSG 783
            +E  +     K   + G
Sbjct: 2045 EEPANQGSQNKSGDLVG 2061



 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 64/219 (29%), Positives = 94/219 (42%)
 Frame = +1

Query: 514  TNSQSVSVGIDPSSQPNPPFSVPLGPQSGPPSHSVPKQVKGRGRKAQSEVEAPRRRGRKQ 693
            ++  +V VG+ P+  P     VP G QS  P  SVP QVKG+GRKAQS  E PRRRG+KQ
Sbjct: 1831 SSMHNVGVGV-PAIPPQSLPPVPPGSQSTVPDSSVPVQVKGQGRKAQSGGEGPRRRGKKQ 1889

Query: 694  GAVTTVVPDRSVGQESTSIEPPEKKSRVSGGGKAIATRSKQQNEAQKLMQSEASKVHTFD 873
             +V   VPD   GQ+    E                 +S+ +    KL +   +K+    
Sbjct: 1890 ASVPPAVPDALAGQDPKLNE-----------------QSQNKLGDPKLNEPSQNKLG--- 1929

Query: 874  GFAGLDTSLTEKSYDSAQNKQGTSSSVAVDVATNSPDNASANVKVSQLDASVNSRDGTLS 1053
                 D  L E+S+++  +   T+SS      T  PD+  A+  V  +  +V        
Sbjct: 1930 -----DPKLNEQSHNNTGDSILTASSFP---TTPGPDSVPASTTVKSISGTVQH------ 1975

Query: 1054 TKMESCESSADPSTIEIHDAGVKDVAPPIKEVTSDTRSS 1170
                            +  A     APP+  V SD++S+
Sbjct: 1976 --------------FGVGIAPSSQAAPPLHLVASDSKST 2000


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
            gi|223543945|gb|EEF45471.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3502

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 82/277 (29%), Positives = 121/277 (43%), Gaps = 28/277 (10%)
 Frame = +1

Query: 439  IRGSTHDLSVG-----TSGSQTTLPLLHVP--------------TNSQSVSVGIDPSSQP 561
            I   +HD SV      TSG+ +++P+ H                TNS+ V + +D  S P
Sbjct: 1890 INDQSHDTSVNQLVSVTSGTVSSVPMAHCQSSLSAATTELTSGTTNSEPV-IALDSKSAP 1948

Query: 562  NPPFSVPLGPQSGPPSHSVPKQVKGRGRKAQSEVEA--PRRRGRKQGAVTTVVPDRSVGQ 735
             P  S     Q   P  S P Q+KG+GRK QS   A  PRRRGRKQ  ++ V PD  V Q
Sbjct: 1949 -PISSNSTTVQCSAPCPSAPTQMKGQGRKTQSGAGAGTPRRRGRKQAMISPVYPDALVSQ 2007

Query: 736  ESTSIEPPEKKSRVSGGGKAIATRSKQQNEAQKLMQSEASKVHTFDGFAGLDTSLTEKSY 915
               S +  + KS    G KA    S Q+    +    +  K      F+G D    ++  
Sbjct: 2008 -VISDKLLQMKSEEPSGSKATVVMSSQETHGCEQKDIDLDK---STKFSGQDKKSAKQLD 2063

Query: 916  DSAQNKQGTSSSVAVDVATNSPDNASANVKVSQLDASVNSRDGTLSTKMESCESSADPST 1095
            D AQ +Q   SS A+++ T+     SA++           RD    T   S E+S  PS 
Sbjct: 2064 DVAQTRQPICSS-AMNIGTSPGQILSADM-----------RDAASLTMEFSAENS--PSK 2109

Query: 1096 IEIHDAG----VKDVAPPIKEVTSD---TRSSEVKIC 1185
             ++ + G    +  + P I   +++   ++ SE K C
Sbjct: 2110 AKVGEQGNVGSISLLTPTITNTSTEVVLSQCSEDKAC 2146


>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851625|gb|EEE89172.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 3427

 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 8/258 (3%)
 Frame = +1

Query: 496  PLLHVPTNSQSV---SVGIDPSSQPNPPFSVPLGPQSGPPSHSVPKQVKGRGRKAQSEVE 666
            P+ ++ +NS+       GI P +QP  P SV LG Q+ P S S+P Q +GRGRK Q  V+
Sbjct: 1864 PVPNLGSNSRGTPHSGSGISPCTQPITPVSVTLGTQTTPASLSMPLQSRGRGRKVQGGVQ 1923

Query: 667  APRRRGRKQGAV-----TTVVPDRSVGQESTSIEPPEKKSRVSGGGKAIATRSKQQNEAQ 831
             PRRRG+ Q A+     ++ VPD ++  +S ++      S ++ GG  +++    Q+ + 
Sbjct: 1924 TPRRRGKNQVAISSTPASSAVPDPNINDQSVNVS--VNPSIIAMGG-TVSSAPMSQHPSN 1980

Query: 832  KLMQSEASKVHTFDGFAGLDTSLTEKSYDSAQNKQGTSSSVAVDVATNSPDNASANVKVS 1011
                + A   +     +G  T+L     DS       S S  +     SP   S  ++V 
Sbjct: 1981 LPGSAAAEGTNATTHHSGPGTTL-----DSEPKPPNPSISPIIQSIAPSP---SVPMQVK 2032

Query: 1012 QLDASVNSRDGTLSTKMESCESSADPSTIEIHDAGVKDVAPPIKEVTSDTRSSEVKICQS 1191
              +    S  GT   +    E    PS  ++ D  +    P + +  S   SS  K   +
Sbjct: 2033 GQNQKTQSGTGTPRRRGRK-EVPVSPSVPDVSDGQLSKSNPTLSQDKSG-ESSGSKAIFT 2090

Query: 1192 SSIEGGDALTLGVSKSSL 1245
             S +  DAL   V++  L
Sbjct: 2091 MSNQQNDALERDVNQEQL 2108



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 77/278 (27%), Positives = 117/278 (42%), Gaps = 13/278 (4%)
 Frame = +1

Query: 625  QVKGRGRKAQSEVEAPRRRGRKQGAVTTVVPDRSVGQESTSIEPPEKKSRVSGGGKAIAT 804
            QVK +GRKA + VE PRRRG+KQG+V+  V D SV Q+       + KSR S GG A++ 
Sbjct: 2268 QVKRQGRKAPTRVETPRRRGKKQGSVSLAV-DASVDQDPIINAQTQNKSRDSLGGMAMSL 2326

Query: 805  RSKQQNEAQKLMQSEASKVHTFDGFAGLDTSLTEKSYDSAQNKQGTSSSVAVDVATNSPD 984
            RS Q N+ ++L ++   +     G  G D    E S   A  +  TS    V        
Sbjct: 2327 RSGQGNDFKEL-KNVVQEACVPSGLVGQDPKRKEASGIPAFGQIQTSDVTDVARVMKEIF 2385

Query: 985  NASANVKVSQLDAS-VNSRDGTLSTKMESCESSADPSTIEIHDAGVKDVAPPIKEVTSDT 1161
            + + + K    D S V  R   +S+KM S E + D S+    D         ++      
Sbjct: 2386 SETCSSKTKSGDYSGVEVRSAPVSSKM-SVEVAKDRSS----DCKALSAVSVLEAEAPVM 2440

Query: 1162 RSSEVKICQSSSIEGGDALTLGVSKSSLLEASVT-QSLDSKTYS-----------TLLTL 1305
            RSS   I  S     GD + +    +S  EA V   S+D    S               L
Sbjct: 2441 RSS---IDDSKQSGSGDGVKMEGDNASEAEAPVMGSSIDDSKQSGSGDGVKMEGDNASDL 2497

Query: 1306 GTESVCDLTIGMCGTQSGKEGVEKVEEMIRAPSGEIVT 1419
                + ++ +      +    +EK+ + I+A +   +T
Sbjct: 2498 AKAHISEIDVSTIENNTSHGPIEKMTDTIQASTKNPIT 2535


>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
            Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 77/341 (22%), Positives = 137/341 (40%), Gaps = 14/341 (4%)
 Frame = +1

Query: 520  SQSVSVGIDPSSQPNPPFSV------PLGPQSGPPSHSVPKQVKGRGRKAQSEVEAPRRR 681
            ++S+S  +DP +    P ++      P G +S P S+      K +GRK Q+ +E PRRR
Sbjct: 2185 TESISQSVDPVTAKIVPSTLTTVYPSPPGSESNPSSYE-SVSAKRQGRKTQNRLEPPRRR 2243

Query: 682  GRKQGAVTTVVPDRSVGQESTSIEPPEKKSRVSGGGKAIATRSKQQNEAQKLMQSEASKV 861
            G+K      V  D  +GQ+           ++S   +     S    +   + Q++A +V
Sbjct: 2244 GKKSAPALPVASDALIGQD----------PKLSHHAQISPVNSLVGIDTSNVTQAKALEV 2293

Query: 862  HTFDGFAGLDTSLTEKSYDSAQNKQGTSSSVAVDVATNSPDNASANVKVSQLDASVNSRD 1041
                G A  D+   +++ + AQNKQ   +S  +D A  S D  +   ++           
Sbjct: 2294 LLPSGVAN-DSKRKQRTTNPAQNKQQKVASPRIDSAPVSSDKVAPFGRIQ---------- 2342

Query: 1042 GTLSTKMESCESSADPSTIEIHDAGVKDVAPPIKEVTSDTRSSEVKICQSSSIEGGDALT 1221
                                     V DVA  +KEV S T   + K       E  +   
Sbjct: 2343 ------------------------NVNDVARVMKEVFSGTCLPKPKSHDPIGSEDRNTPF 2378

Query: 1222 LGVSKSSLLEASVTQSLDSKTYSTLLTLGTESVC---DLTIGMCGTQSGKEGVEKVEEMI 1392
            + V+  +  +AS +QS++ K  S + T G   VC   ++ + +   QS  EG   ++ + 
Sbjct: 2379 VHVTTKAAADASGSQSVEDKACSDIETAGV--VCQTGNVAVNVDEKQSEGEGASDMQNLE 2436

Query: 1393 RAPSGEIVTPN-----PEIDYSESKRKADVLVSSTTVSEQL 1500
              PS +  T       P +    +K+++D+      + E +
Sbjct: 2437 GKPSLDAPTTGAPSLAPAMPVKGNKQESDIASDKNMILENM 2477


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