BLASTX nr result

ID: Panax21_contig00013251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013251
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, ch...   107   4e-21
emb|CBI18834.3| unnamed protein product [Vitis vinifera]              107   4e-21
emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]   107   4e-21
emb|CBI25886.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_002310879.1| predicted protein [Populus trichocarpa] gi|2...    84   6e-14

>ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
           partial [Vitis vinifera]
          Length = 555

 Score =  107 bits (267), Expect = 4e-21
 Identities = 65/155 (41%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
 Frame = +1

Query: 46  IVRSYSSAEDKDVEIEQLSGXXXXXXXXXXXXXXXXQSPGDPEGMMYDDQGDSSDGWLAS 225
           +V S S AED D+  E  +                  S GD +  M D +GD SDGWL+ 
Sbjct: 404 VVDSLSGAEDDDMPSELPAEPVDDDDENDIVSEL---SSGDVQETMDDHEGDYSDGWLSR 460

Query: 226 G-----NGQEMCXXXXXXXXXXXXXXXXCRITNKDSQCRPESVPHVKTSAIMGVGLQELL 390
           G     + Q                    R+T KDS  +P+ +PHVKTSA+MGVGLQELL
Sbjct: 461 GGEGSEDDQGNPSRWKTMDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGLQELL 520

Query: 391 ELIDERLKTQKVVQLSPFDRKWRPPRADETGIAVE 495
            LIDE+L+TQKV + + FDRKWRPP  ++ G+AVE
Sbjct: 521 ALIDEKLETQKVPERNYFDRKWRPPHTEDVGVAVE 555


>emb|CBI18834.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  107 bits (267), Expect = 4e-21
 Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 5/118 (4%)
 Frame = +1

Query: 157 SPGDPEGMMYDDQGDSSDGWLASG-----NGQEMCXXXXXXXXXXXXXXXXCRITNKDSQ 321
           S GD +  M D +GD SDGWL+ G     + Q                    R+T KDS 
Sbjct: 95  SSGDVQETMDDREGDYSDGWLSGGGEGSEDDQGSPPRWKTMDDQQSESFKDRRMTEKDSC 154

Query: 322 CRPESVPHVKTSAIMGVGLQELLELIDERLKTQKVVQLSPFDRKWRPPRADETGIAVE 495
            +P+ +PHVKTSA+MGVGLQELL LIDE+L+TQKV + + FDRKWRPP  ++ G+AVE
Sbjct: 155 SQPQCIPHVKTSAVMGVGLQELLALIDEKLETQKVPERNYFDRKWRPPHTEDVGVAVE 212


>emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]
          Length = 743

 Score =  107 bits (267), Expect = 4e-21
 Identities = 65/155 (41%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
 Frame = +1

Query: 46   IVRSYSSAEDKDVEIEQLSGXXXXXXXXXXXXXXXXQSPGDPEGMMYDDQGDSSDGWLAS 225
            +V S S AED D+  E  +                  S GD +  M D +GD SDGWL+ 
Sbjct: 592  VVDSLSGAEDDDMPSELPAEPVDDDDENDIVSEL---SSGDVQETMDDHEGDYSDGWLSR 648

Query: 226  G-----NGQEMCXXXXXXXXXXXXXXXXCRITNKDSQCRPESVPHVKTSAIMGVGLQELL 390
            G     + Q                    R+T KDS  +P+ +PHVKTSA+MGVGLQELL
Sbjct: 649  GGEGSEDDQGNPSRWKTMDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGLQELL 708

Query: 391  ELIDERLKTQKVVQLSPFDRKWRPPRADETGIAVE 495
             LIDE+L+TQKV + + FDRKWRPP  ++ G+AVE
Sbjct: 709  ALIDEKLETQKVPERNYFDRKWRPPHTEDVGVAVE 743


>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = +1

Query: 313 DSQCRPESVPHVKTSAIMGVGLQELLELIDERLKTQKVVQLSPFDRKWRPPRADETGIAV 492
           DS  +P+ +PHVKTSA+MGVGLQELL LIDE+L+TQKV + + FDRKWRPP  ++ G+AV
Sbjct: 520 DSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLETQKVPERNYFDRKWRPPHTEDVGVAV 579

Query: 493 E 495
           E
Sbjct: 580 E 580


>ref|XP_002310879.1| predicted protein [Populus trichocarpa] gi|222853782|gb|EEE91329.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
 Frame = +1

Query: 154 QSPGDPEGMMYDDQGDSSDGWLASGNGQEMCXXXXXXXXXXXXXXXXCRITNKDS-QCRP 330
           +S GD E  + ++Q D S  WL SG+ QEM                   +  ++  QC+ 
Sbjct: 343 RSEGDFEETIDNEQDDYSGDWLLSGDDQEMVGDHWLKTLDEQRDEALNDLGMENFLQCQA 402

Query: 331 ESVPHVKTSAIMGVGLQELLELIDERLKT-------QKVVQLSPFDRKWRPPRADETGIA 489
           +  PH+K SA+ GVGLQELLELID+RLKT       Q VV+   F++KWRPPR ++ GIA
Sbjct: 403 QHGPHLKISAMTGVGLQELLELIDDRLKTQDEKFKEQNVVERGFFNKKWRPPRTEDAGIA 462

Query: 490 VEQ 498
             +
Sbjct: 463 AAE 465


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