BLASTX nr result

ID: Panax21_contig00013248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013248
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB16993.1| unknown [Solanum tuberosum]                            194   6e-48
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C...   193   1e-47
gb|AFK48775.1| unknown [Lotus japonicus]                              192   3e-47
emb|CBI32689.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_002326333.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47

>gb|ABB16993.1| unknown [Solanum tuberosum]
          Length = 142

 Score =  194 bits (493), Expect = 6e-48
 Identities = 93/93 (100%), Positives = 93/93 (100%)
 Frame = +2

Query: 95  MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 274
           MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 275 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 373
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 93


>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
           gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
          Length = 142

 Score =  193 bits (490), Expect = 1e-47
 Identities = 92/93 (98%), Positives = 93/93 (100%)
 Frame = +2

Query: 95  MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 274
           MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 275 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 373
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 93


>gb|AFK48775.1| unknown [Lotus japonicus]
          Length = 142

 Score =  192 bits (487), Expect = 3e-47
 Identities = 92/93 (98%), Positives = 92/93 (98%)
 Frame = +2

Query: 95  MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 274
           MGKTRGMGA RKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 275 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 373
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 93


>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  192 bits (487), Expect = 3e-47
 Identities = 92/96 (95%), Positives = 94/96 (97%)
 Frame = +2

Query: 86  SATMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIE 265
           S  MGKTRGMGAGRKLKSHRRRQRWADK+YKKS+LGNEWKKPFAGSSHAKGIVLEKIGIE
Sbjct: 45  SVAMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIE 104

Query: 266 AKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 373
           AKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI
Sbjct: 105 AKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 140


>ref|XP_002326333.1| predicted protein [Populus trichocarpa]
           gi|224098071|ref|XP_002311115.1| predicted protein
           [Populus trichocarpa] gi|224112945|ref|XP_002316341.1|
           predicted protein [Populus trichocarpa]
           gi|224140159|ref|XP_002323452.1| predicted protein
           [Populus trichocarpa] gi|118483731|gb|ABK93759.1|
           unknown [Populus trichocarpa]
           gi|118484067|gb|ABK93919.1| unknown [Populus
           trichocarpa] gi|118487579|gb|ABK95615.1| unknown
           [Populus trichocarpa] gi|222833526|gb|EEE72003.1|
           predicted protein [Populus trichocarpa]
           gi|222850935|gb|EEE88482.1| predicted protein [Populus
           trichocarpa] gi|222865381|gb|EEF02512.1| predicted
           protein [Populus trichocarpa]
           gi|222868082|gb|EEF05213.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/93 (98%), Positives = 93/93 (100%)
 Frame = +2

Query: 95  MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 274
           MGKTRGMGAGRKLKSHRRRQRWADKSYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 275 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 373
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYI 93


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