BLASTX nr result

ID: Panax21_contig00013235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013235
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi...   237   1e-60
ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2...   237   1e-60
ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...   233   2e-59
emb|CAN62050.1| hypothetical protein VITISV_016640 [Vitis vinifera]   224   9e-57
ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2...   222   4e-56

>ref|XP_002533224.1| wd40 protein, putative [Ricinus communis]
           gi|223526967|gb|EEF29164.1| wd40 protein, putative
           [Ricinus communis]
          Length = 807

 Score =  237 bits (605), Expect = 1e-60
 Identities = 117/195 (60%), Positives = 139/195 (71%)
 Frame = -1

Query: 592 VPELMKTINIRYPIYSMVIPGLLSLPSESDEKSPDLFAYVSIDEMKEQEKLPNTLHGQIR 413
           VPEL+KT++I++PI+SMVIP LLS  +E++EK   LFAYVSI+  KE E    +L G I+
Sbjct: 83  VPELIKTVDIKFPIFSMVIPSLLSQQAETNEKRSKLFAYVSIENTKETEDQSKSLRGLIK 142

Query: 412 KCNLTESRLVGGVTLAETPEPEFITFSSSGKYIGIKEKRKLRIWEVPTKDSERVFYKKIR 233
           KCNLT+SRL+GGVTL ET +P+FIT S SGKY GI  KRKL IW VP+ DSER   KKI 
Sbjct: 143 KCNLTDSRLLGGVTLTETKQPQFITISPSGKYFGIWTKRKLHIWIVPSTDSERAIVKKIT 202

Query: 232 LHHTKNFTTFAFHPTERIVAAGDVTGRILIWRGFGNRTFSVGDKSAIGELMKIXXXXXXX 53
           LHHT+N T  AFHPT++IVAAGDVTGRILIWRGFGNR+F V D    G  M         
Sbjct: 203 LHHTRNMTVVAFHPTQKIVAAGDVTGRILIWRGFGNRSFGVNDILMSGISMNNDEERPGV 262

Query: 52  XXXXXXDSCTVWHWH 8
                 +SCT WHWH
Sbjct: 263 RGDDDAESCTTWHWH 277


>ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1|
           predicted protein [Populus trichocarpa]
          Length = 812

 Score =  237 bits (605), Expect = 1e-60
 Identities = 120/198 (60%), Positives = 141/198 (71%), Gaps = 1/198 (0%)
 Frame = -1

Query: 592 VPELMKTINIRYPIYSMVIPGLLSLPSESDEKSPDLFAYVSIDEMKEQEKLPN-TLHGQI 416
           VPEL+K IN+  PI SMVIP LLS  +E+++KSP  FAY+S++  KE EK     L GQI
Sbjct: 86  VPELIKIINVNLPIISMVIPSLLSQTAETNDKSPKTFAYLSVENTKEPEKESGKALRGQI 145

Query: 415 RKCNLTESRLVGGVTLAETPEPEFITFSSSGKYIGIKEKRKLRIWEVPTKDSERVFYKKI 236
           +KCNLT SR+ GG+TL+ET +PE IT SSSGKY GI+ KRKLRIW+VPT +SER   KKI
Sbjct: 146 KKCNLTNSRMAGGMTLSETKQPEIITVSSSGKYFGIQFKRKLRIWKVPTAESERAVVKKI 205

Query: 235 RLHHTKNFTTFAFHPTERIVAAGDVTGRILIWRGFGNRTFSVGDKSAIGELMKIXXXXXX 56
            LHHTKN    AFHPT+RIVAAGDVTGRILIWRGFG+RTF+ GD     +L         
Sbjct: 206 TLHHTKNMNVLAFHPTQRIVAAGDVTGRILIWRGFGDRTFADGDGLVSRKLTNNEEERPG 265

Query: 55  XXXXXXXDSCTVWHWHSA 2
                  DSCT WHWHSA
Sbjct: 266 VRGDDDADSCTTWHWHSA 283


>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
           gi|296087114|emb|CBI33488.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  233 bits (594), Expect = 2e-59
 Identities = 117/197 (59%), Positives = 139/197 (70%)
 Frame = -1

Query: 592 VPELMKTINIRYPIYSMVIPGLLSLPSESDEKSPDLFAYVSIDEMKEQEKLPNTLHGQIR 413
           +PELMKT++IR PI+SMVIPG+LS  +E+D K+P+LFAY+S++  K Q+  P  +H +I 
Sbjct: 86  LPELMKTVDIRLPIFSMVIPGILSQLAETDGKTPNLFAYLSVENTKIQDDQPK-VHRKIL 144

Query: 412 KCNLTESRLVGGVTLAETPEPEFITFSSSGKYIGIKEKRKLRIWEVPTKDSERVFYKKIR 233
           KCNLT+SRL  GV LAET +PE IT SSSGK+ G++ KRKL +WEV   D E    KKI 
Sbjct: 145 KCNLTKSRLAAGVILAETQQPELITISSSGKFFGVRNKRKLHVWEVIAHDHEGAPIKKIT 204

Query: 232 LHHTKNFTTFAFHPTERIVAAGDVTGRILIWRGFGNRTFSVGDKSAIGELMKIXXXXXXX 53
           LHHTKN T FAFHPTERIVAAGDVTGRILIWR FG RTFS+GD    G  M         
Sbjct: 205 LHHTKNLTVFAFHPTERIVAAGDVTGRILIWRSFGRRTFSMGDGLMNGRAMNNEDERPGV 264

Query: 52  XXXXXXDSCTVWHWHSA 2
                 DSC  WHWHSA
Sbjct: 265 RGDDDADSCATWHWHSA 281


>emb|CAN62050.1| hypothetical protein VITISV_016640 [Vitis vinifera]
          Length = 457

 Score =  224 bits (571), Expect = 9e-57
 Identities = 117/208 (56%), Positives = 139/208 (66%), Gaps = 11/208 (5%)
 Frame = -1

Query: 592 VPELMKTINIRYPIYSMVIPGLLSLPSESDEKSPDLFAYVSIDEMKEQEKLPNTLHGQIR 413
           +PELMKT++IR PI+SMVIPG+LS  +E+D K+P+LFAY+S++  K Q+  P  +H +I 
Sbjct: 87  LPELMKTVDIRLPIFSMVIPGILSQLAETDGKTPNLFAYLSVENTKIQDDQPK-VHQKIL 145

Query: 412 KCNLTESRLVGGVTLAE-----------TPEPEFITFSSSGKYIGIKEKRKLRIWEVPTK 266
           KCNLT+SRL  GV LAE           T +PE IT SSSGK+ G++ KRKL +WEV   
Sbjct: 146 KCNLTKSRLAAGVILAEVARFKYKFPTKTQQPELITISSSGKFFGVRNKRKLHVWEVIAH 205

Query: 265 DSERVFYKKIRLHHTKNFTTFAFHPTERIVAAGDVTGRILIWRGFGNRTFSVGDKSAIGE 86
           D E    KKI LHHTKN T FAFHPTERIVAAGDVTGRILIWR FG RTFS+GD    G 
Sbjct: 206 DHEGAPIKKITLHHTKNLTVFAFHPTERIVAAGDVTGRILIWRSFGXRTFSMGDGLMNGR 265

Query: 85  LMKIXXXXXXXXXXXXXDSCTVWHWHSA 2
            M               DSC  WHWHSA
Sbjct: 266 AMNNEDERPGVRGDDDADSCATWHWHSA 293


>ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  222 bits (565), Expect = 4e-56
 Identities = 114/198 (57%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
 Frame = -1

Query: 592 VPELMKTINIRYPIYSMVIPGLLSLPSESDEKSPDLFAYVSIDEMKEQEK-LPNTLHGQI 416
           VPEL+K IN+  PI SMVIP LL   +E++EKS   FAY+S++  KE EK     L GQI
Sbjct: 86  VPELIKIINVNSPIISMVIPSLLCQTTENNEKSLKSFAYLSVENTKEAEKESTKVLRGQI 145

Query: 415 RKCNLTESRLVGGVTLAETPEPEFITFSSSGKYIGIKEKRKLRIWEVPTKDSERVFYKKI 236
           +KCNLT+ R+ GGVTL ET +PE IT S+SGKY GI+ K KL+IW+VPT +SER   KKI
Sbjct: 146 KKCNLTDFRMAGGVTLTETKQPEIITVSASGKYFGIRFKCKLQIWKVPTTESERAVVKKI 205

Query: 235 RLHHTKNFTTFAFHPTERIVAAGDVTGRILIWRGFGNRTFSVGDKSAIGELMKIXXXXXX 56
            LHHTKN T  AFHP +RI+AAGDVTGRILIWRGFG+RTF   D+      M        
Sbjct: 206 TLHHTKNMTVLAFHPNQRIIAAGDVTGRILIWRGFGDRTFVDDDRLVGVRSMNNGEERPG 265

Query: 55  XXXXXXXDSCTVWHWHSA 2
                  DSCT WHWHSA
Sbjct: 266 VRGDDDADSCTTWHWHSA 283


Top