BLASTX nr result
ID: Panax21_contig00013216
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00013216 (394 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 105 3e-21 ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 98 8e-19 gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] 97 1e-18 ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 96 4e-18 ref|XP_002531036.1| conserved hypothetical protein [Ricinus comm... 94 9e-18 >ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 738 Score = 105 bits (263), Expect = 3e-21 Identities = 63/121 (52%), Positives = 78/121 (64%), Gaps = 3/121 (2%) Frame = +1 Query: 37 SMPTSVNLEDKHSAEGRTTEETSPENGSNTPVQSGMDCVPFVHISEAGLPNTPCKLENLK 216 SMP + ++K S E + EE S + +NTPV++GM+CVPFV SEAGLP TPCKLE K Sbjct: 541 SMPKVLKPDNKTSLECQIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFK 600 Query: 217 DGLVRSIRTK-LNKDLDNXXXXXXXXXXKEEEPQDGSSVKKRSAERRGNECSDNG--DKD 387 DGL R+ R K DLD+ K +EPQ GSS KKRSAER+ EC+ NG D+D Sbjct: 601 DGLGRNGRPKPSTMDLDD-------GSGKGDEPQAGSSSKKRSAERQDEECAANGPSDRD 653 Query: 388 F 390 F Sbjct: 654 F 654 >ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 737 Score = 97.8 bits (242), Expect = 8e-19 Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 5/124 (4%) Frame = +1 Query: 34 SSMPTS--VNLEDKHSAEGRTTEETSPENGSNTPVQSGMDCVPFVHISEAGLPNTPCKLE 207 +S+P+S + LE+KHS E + TE+ S ++G N+P +G +CVP V S+ GLPNTPCKLE Sbjct: 537 ASIPSSDVLKLENKHSPEEQVTEDMSTDDGLNSPALTGRECVPLVGSSKGGLPNTPCKLE 596 Query: 208 NLKDGLVRSIRTKLN-KDLDNXXXXXXXXXXKEEEPQDGSSVKKRSAERR--GNECSDNG 378 LKDG ++ R+K + KD +N K E PQDGS+ KKRS ER+ G + Sbjct: 597 TLKDGPGKNKRSKSSGKDQEN-------VSGKREGPQDGSTSKKRSGERQEEGRVANGFS 649 Query: 379 DKDF 390 D+DF Sbjct: 650 DRDF 653 >gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] Length = 739 Score = 97.4 bits (241), Expect = 1e-18 Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 3/122 (2%) Frame = +1 Query: 34 SSMPTS--VNLEDKHSAEGRTTEETSPENGSNTPVQSGMDCVPFVHISEAGLPNTPCKLE 207 +S+P + +NLE+K ++ +TTEETS +NGSN P+Q+ ++ PFV +AGLP TPCK+E Sbjct: 542 TSLPNTDAINLENKQCSDVQTTEETSTDNGSNAPLQTALEFAPFVGSVDAGLPITPCKME 601 Query: 208 NLKDGLVRSIRTK-LNKDLDNXXXXXXXXXXKEEEPQDGSSVKKRSAERRGNECSDNGDK 384 N+K L R +++ +KDLDN KE+ PQ G S KKR E EC+ GDK Sbjct: 602 NVKGSLGRKGKSEHCSKDLDN-------GSGKEDGPQVGCSSKKRVGEWH-EECAGTGDK 653 Query: 385 DF 390 DF Sbjct: 654 DF 655 >ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 736 Score = 95.5 bits (236), Expect = 4e-18 Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 5/124 (4%) Frame = +1 Query: 34 SSMPTS--VNLEDKHSAEGRTTEETSPENGSNTPVQSGMDCVPFVHISEAGLPNTPCKLE 207 +S+P+S + LE+KHS E + TE+ S ++G +P +G +CVP V SE GLPNTPCKLE Sbjct: 536 ASIPSSDVLKLENKHSPEEQITEDMSTDDGLISPALTGRECVPLVGSSEGGLPNTPCKLE 595 Query: 208 NLKDGLVRSIRTKLN-KDLDNXXXXXXXXXXKEEEPQDGSSVKKRSAERR--GNECSDNG 378 LKDG ++ R+K + KD +N K E PQDGS+ KKRS ER+ G + Sbjct: 596 TLKDGPGKNKRSKSSGKDQEN-------VSGKREGPQDGSTSKKRSGERQEEGRVANGFS 648 Query: 379 DKDF 390 D+DF Sbjct: 649 DRDF 652 >ref|XP_002531036.1| conserved hypothetical protein [Ricinus communis] gi|223529389|gb|EEF31353.1| conserved hypothetical protein [Ricinus communis] Length = 710 Score = 94.4 bits (233), Expect = 9e-18 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 7/135 (5%) Frame = +1 Query: 7 MLNEERVID--SSMPTS--VNLEDKHSAEGRTTEETSPENGSNTPVQSGMDCVPFVHIS- 171 +L+EE + +SMP L+++HS E + +ETS ENGS+ P+ + ++CVPF Sbjct: 500 LLDEEHTVQVVTSMPCCDMQKLQNEHSHEDQIVDETSTENGSDAPIHTDLECVPFEGKGN 559 Query: 172 -EAGLPNTPCKLENLKDGLVRSIRTK-LNKDLDNXXXXXXXXXXKEEEPQDGSSVKKRSA 345 E LP TPCKL+ +KDG R R+K NKDL N K EEPQD S+ KKRS Sbjct: 560 IETSLPITPCKLDMIKDGQGRHGRSKSSNKDLLN-------GTGKGEEPQDASTSKKRSG 612 Query: 346 ERRGNECSDNGDKDF 390 ERR EC+ + D+DF Sbjct: 613 ERRDEECT-HSDRDF 626