BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013167
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...   389   e-105
emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [So...   388   e-105
emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Ni...   375   e-101
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni...   375   e-101
emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Ni...   374   e-101

>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
            gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
            protein Virp1a [Solanum lycopersicum]
            gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
            protein Virp1b [Solanum lycopersicum]
            gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
            protein Virp1c [Solanum lycopersicum]
            gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
            protein Virp1d [Solanum lycopersicum]
            gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
            gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score =  389 bits (998), Expect = e-105
 Identities = 215/361 (59%), Positives = 237/361 (65%), Gaps = 10/361 (2%)
 Frame = +1

Query: 1    KLMKHKHSWVFNKPVDAIALGLHDYHQIVKRPMDLGTVKSNFSKNLYSSPADFASDVRLT 180
            KLMKHK+ W+FN PVDA ALGLHDYHQI+KRPMDLGTVKSN +KN Y SP +FA+DVRLT
Sbjct: 202  KLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLGTVKSNLAKNFYPSPFEFAADVRLT 261

Query: 181  FNNAMLYNPKTDEVHSMAAQLLSEFEIKFRLIQDKLRSNIQREPSGFVNDELQGSSWNEI 360
            FNNA+LYNPKTD+V++ A QLL  FE  FR +QDK+             DELQGSSWN I
Sbjct: 262  FNNALLYNPKTDQVNAFAEQLLGRFEDMFRPLQDKMNKLEGGRRDYHPVDELQGSSWNHI 321

Query: 361  PTPERPKKPKTNLMGSIPKKPERVPEPVHXXXXXXXXXXXXXXXXXXXXXXXTPSPMRAQ 540
            PTPER KKPK   + +I KK ER+                            TPSP+RA 
Sbjct: 322  PTPERVKKPKPTPVPNISKKQERMQNH-SSASTPSLPVPPPNPPARQQSPLSTPSPVRAP 380

Query: 541  PVKPTGLVKGAPTGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRN 720
              KP    K    GKQPKPRAKDPNKREM+MEEKHKLGVGLQSLPQEKMPQLVQIIRKRN
Sbjct: 381  AAKPQSAAKVPTMGKQPKPRAKDPNKREMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRN 440

Query: 721  EQLAQEGDEIELDIEALDTETLWELDRFVTNWKKLVSKTKRQALMGN---------NVXX 873
            E LAQ+GDEIELDIEALDTETLWELDRFVTNWKK+VSKTKRQALM N             
Sbjct: 441  EHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALMNNLGPPSASAAASAA 500

Query: 874  XXXXXXXXXXXVSYRNDGAKKIKK-XXXXXXXXXXXXMPESSFPPVEIEKDDGGHGRDNG 1050
                        S +ND  KK KK              P + FPPVEIEKD+GG GRD  
Sbjct: 501  TTSVAEADGPTTSEKNDSFKKAKKGDVGEEDVEIEDDEPATHFPPVEIEKDEGG-GRDQE 559

Query: 1051 N 1053
            N
Sbjct: 560  N 560


>emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
          Length = 602

 Score =  388 bits (996), Expect = e-105
 Identities = 215/362 (59%), Positives = 237/362 (65%), Gaps = 11/362 (3%)
 Frame = +1

Query: 1    KLMKHKHSWVFNKPVDAIALGLHDYHQIVKRPMDLGTVKSNFSKNLYSSPADFASDVRLT 180
            KLMKHK+ W+FN PVDA ALGLHDYHQI+KRP+DLGTVKSN +KN Y SP +FA+DVRLT
Sbjct: 202  KLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPIDLGTVKSNLAKNFYPSPFEFAADVRLT 261

Query: 181  FNNAMLYNPKTDEVHSMAAQLLSEFEIKFRLIQDKLRSNIQREPSGFVNDELQGSSWNEI 360
            FNNA+LYNPKTD+V+  A QLL  FE  FR +QDK+             DELQGSSWN I
Sbjct: 262  FNNALLYNPKTDQVNGFAEQLLGRFEDMFRPLQDKMNKLEGGRRDYHPVDELQGSSWNHI 321

Query: 361  PTPERPKKPKTNLMGSIPKKPERVPEPVHXXXXXXXXXXXXXXXXXXXXXXXTPSPMRAQ 540
            PTPER KKPK   +  I KK ER+                            TPSP+RA 
Sbjct: 322  PTPERVKKPKATPVPHISKKQERMQNH-SSASTPSLPVPPPNPPARQQSPLSTPSPVRAP 380

Query: 541  PVKPTGLVKGAPTGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRN 720
            P KP    K    GKQPKPRAKDPNKR M+MEEKHKLGVGLQSLPQEKMPQLVQIIRKRN
Sbjct: 381  PSKPESAAKVPAMGKQPKPRAKDPNKRVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRN 440

Query: 721  EQLAQEGDEIELDIEALDTETLWELDRFVTNWKKLVSKTKRQALMGNNVXXXXXXXXXXX 900
            E LAQ+GDEIELDIEALDTETLWELDRFVTNWKK+VSKTKRQALM NN+           
Sbjct: 441  EHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALMINNLGPPSASAAASA 500

Query: 901  XXVSY----------RNDGAKKIKK-XXXXXXXXXXXXMPESSFPPVEIEKDDGGHGRDN 1047
               S           +ND  KK KK              P + FPPVEIEKD+GG GRD 
Sbjct: 501  ATTSVAEADGPTTSEKNDSFKKPKKGDVGEEDVEIEDDEPATHFPPVEIEKDEGG-GRDQ 559

Query: 1048 GN 1053
             N
Sbjct: 560  EN 561


>emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana benthamiana]
          Length = 615

 Score =  375 bits (964), Expect = e-101
 Identities = 215/372 (57%), Positives = 235/372 (63%), Gaps = 20/372 (5%)
 Frame = +1

Query: 1    KLMKHKHSWVFNKPVDAIALGLHDYHQIVKRPMDLGTVKSNFSKNLYSSPADFASDVRLT 180
            KLMKHK  W+FN PVDA ALGLHDYHQI+KRPMDLGTVKSN S   Y +P +FA+DVRLT
Sbjct: 202  KLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPMDLGTVKSNLSNCFYPTPFEFAADVRLT 261

Query: 181  FNNAMLYNPKTDEVHSMAAQLLSEFEIKFRLIQDKLR--SNIQREPSGFVNDELQGSSWN 354
            FNNA+LYNPKTD+VH  A QLL+ FE  FR IQDKL               DELQG SWN
Sbjct: 262  FNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKLNKLDGGSDRRDFHPTDELQGISWN 321

Query: 355  EIPTPERPKKPKTNLMGSIPKKPERVPE-PVHXXXXXXXXXXXXXXXXXXXXXXXTPSPM 531
             IPTPER KKPK      I KK ER+ +                           TPSP+
Sbjct: 322  HIPTPERVKKPKPTPAPHISKKQERMMQNHSSALTLPVQQPPDNTPVVRQQSLLSTPSPV 381

Query: 532  RAQPV-KPTGLV--KGAPTGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQ 702
            RA P  KP   V  K  P GKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQ
Sbjct: 382  RAPPAPKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQ 441

Query: 703  IIRKRNEQLAQEGDEIELDIEALDTETLWELDRFVTNWKKLVSKTKRQALMGN------- 861
            IIRKRNE LAQ+GDEIELDIEALDTETLWELDRFVTNWKK+VSKTKRQAL+ N       
Sbjct: 442  IIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQPPSA 501

Query: 862  ----NVXXXXXXXXXXXXXVSYRNDGAKKIKK---XXXXXXXXXXXXMPESSFPPVEIEK 1020
                +               S +ND  KK KK                P + FPPVEI+K
Sbjct: 502  SAAASAATTTSVAEADAPSTSEKNDSFKKPKKGGDAGDEDDVEIEDDEPATHFPPVEIDK 561

Query: 1021 DDGGHGRDNGNE 1056
            D+GG G   G +
Sbjct: 562  DEGGGGGGVGQD 573


>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
          Length = 617

 Score =  375 bits (962), Expect = e-101
 Identities = 219/377 (58%), Positives = 239/377 (63%), Gaps = 28/377 (7%)
 Frame = +1

Query: 1    KLMKHKHSWVFNKPVDAIALGLHDYHQIVKRPMDLGTVKSNFSKNLYSSPADFASDVRLT 180
            KLMKHK  W+FN PVDA A+GLHDYHQI+KRPMDLGTVKSN   N Y +P +FA+DVRLT
Sbjct: 203  KLMKHKSGWIFNTPVDAKAMGLHDYHQIIKRPMDLGTVKSNLINNFYPTPFEFAADVRLT 262

Query: 181  FNNAMLYNPKTDEVHSMAAQLLSEFEIKFRLIQDKLRS---NIQREPSGFVNDELQGSSW 351
            FNNA+LYNPKTD+VH  A QLL+ FE  FR IQDKL        R     + DELQGSSW
Sbjct: 263  FNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKLNKLDGGTGRRDFRAI-DELQGSSW 321

Query: 352  NEIPTPERPKKPKTNLMGSIPKKPERVPE---PVHXXXXXXXXXXXXXXXXXXXXXXXTP 522
            N IPTPER KKPK      I KK ER+ +                             TP
Sbjct: 322  NHIPTPERVKKPKPTPAPHISKKQERMMQNHSSASTPSLPVQQPPDNPPVVRQQSPLSTP 381

Query: 523  SPMRAQPV-KPTGLV--KGAPTGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQ 693
            SP+RA P  KP   V  K  P GKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQ
Sbjct: 382  SPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQ 441

Query: 694  LVQIIRKRNEQLAQEGDEIELDIEALDTETLWELDRFVTNWKKLVSKTKRQALMGN---- 861
            LVQIIRKRNE LAQ+GDEIELDIEALDTETLWELDRFVTNWKK+VSKTKRQAL+ N    
Sbjct: 442  LVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQP 501

Query: 862  -------NVXXXXXXXXXXXXXVSYRNDGAKKIKK---XXXXXXXXXXXXMPESSFPPVE 1011
                   +               S +ND  KK KK                P + FPPVE
Sbjct: 502  PSASAAASAATTTSVAEADGPSTSEKNDSFKKPKKGGDAGDEDDVEIEDDEPATHFPPVE 561

Query: 1012 IE--KDDGGHG---RDN 1047
            IE  KD+GG G   RDN
Sbjct: 562  IEIDKDEGGGGGQVRDN 578


>emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
          Length = 616

 Score =  374 bits (960), Expect = e-101
 Identities = 221/378 (58%), Positives = 239/378 (63%), Gaps = 29/378 (7%)
 Frame = +1

Query: 1    KLMKHKHSWVFNKPVDAIALGLHDYHQIVKRPMDLGTVKSNFSKNLYSSPADFASDVRLT 180
            KLMKHK  W+FN PVDA ALGLHDYHQI+KRP DLGT KSN S N Y +P +FA+DVRLT
Sbjct: 202  KLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDLGTXKSNLSNNFYPTPFEFAADVRLT 261

Query: 181  FNNAMLYNPKTDEVHSMAAQLLSEFEIKFRLIQDKLRSNIQREPSG----FVNDELQGSS 348
            FNNA+LYNPKTD+VH  A QLL+ FE  FR IQDKL  N     SG       DELQGSS
Sbjct: 262  FNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKL--NKLDGGSGRRDFHAIDELQGSS 319

Query: 349  WNEIPTPERPKKPKTNLMGSIPKKPERVPE---PVHXXXXXXXXXXXXXXXXXXXXXXXT 519
            WN IPTPER KKPK      I KK ER+ +                             T
Sbjct: 320  WNHIPTPERVKKPKPTPAPHISKKQERMMQNHSSASTPSLPVQQPPDNPPVVRQQSPLST 379

Query: 520  PSPMRAQPV-KPTGLV--KGAPTGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMP 690
            PSP+RA P  KP   V  K  P GKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMP
Sbjct: 380  PSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMP 439

Query: 691  QLVQIIRKRNEQLAQEGDEIELDIEALDTETLWELDRFVTNWKKLVSKTKRQALMGN--- 861
            QLVQIIRKRNE LAQ+GDEIELDIEALDTETLWELDRFVTNWKK+VSKTKRQAL+ N   
Sbjct: 440  QLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQ 499

Query: 862  --------NVXXXXXXXXXXXXXVSYRNDGAKKIKK---XXXXXXXXXXXXMPESSFPPV 1008
                    +               S +ND  KK KK                P + FPPV
Sbjct: 500  PPSASAAASAATTTSVAEADGPSTSEKNDSFKKPKKGGDAGDEDDVEIEDDEPATHFPPV 559

Query: 1009 EIE--KDDGGHG---RDN 1047
            EIE  KD+GG G   RDN
Sbjct: 560  EIEIDKDEGGGGGQVRDN 577