BLASTX nr result

ID: Panax21_contig00013163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013163
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis v...   476   e-132
emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]   476   e-132
ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|2...   472   e-131
gb|ABK94156.1| unknown [Populus trichocarpa]                          471   e-131
ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus ...   468   e-129

>ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
           gi|297739519|emb|CBI29701.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  476 bits (1224), Expect = e-132
 Identities = 228/260 (87%), Positives = 242/260 (93%)
 Frame = +3

Query: 3   FSKYSKNYESEGGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 182
           F+KYSK YESE GKKDIQ+QLEKMKKYC+VIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG
Sbjct: 130 FTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189

Query: 183 DVAKKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 362
           DVAKKVD+AY FFEKQ+PIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL
Sbjct: 190 DVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249

Query: 363 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQETHSASTEYDRTEKDI 542
           RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK GQE+HSA TE+DRTEKDI
Sbjct: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMTEFDRTEKDI 309

Query: 543 TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVXXXXXXXXXXXXXALEEIKLKFIDTSSKF 722
           TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVV             A+EEIKLKFIDTSSKF
Sbjct: 310 TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKLKFIDTSSKF 369

Query: 723 GHGRFQTTEEKSKFYGRLKS 782
           GHGRFQTT+EK+KF+GRLK+
Sbjct: 370 GHGRFQTTQEKAKFFGRLKA 389


>emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score =  476 bits (1224), Expect = e-132
 Identities = 228/260 (87%), Positives = 242/260 (93%)
 Frame = +3

Query: 3   FSKYSKNYESEGGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 182
           F+KYSK YESE GKKDIQ+QLEKMKKYC+VIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG
Sbjct: 130 FTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189

Query: 183 DVAKKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 362
           DVAKKVD+AY FFEKQ+PIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL
Sbjct: 190 DVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249

Query: 363 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQETHSASTEYDRTEKDI 542
           RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK GQE+HSA TE+DRTEKDI
Sbjct: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMTEFDRTEKDI 309

Query: 543 TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVXXXXXXXXXXXXXALEEIKLKFIDTSSKF 722
           TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVV             A+EEIKLKFIDTSSKF
Sbjct: 310 TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKLKFIDTSSKF 369

Query: 723 GHGRFQTTEEKSKFYGRLKS 782
           GHGRFQTT+EK+KF+GRLK+
Sbjct: 370 GHGRFQTTQEKAKFFGRLKA 389


>ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|222872866|gb|EEF09997.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  472 bits (1214), Expect = e-131
 Identities = 226/260 (86%), Positives = 240/260 (92%)
 Frame = +3

Query: 3   FSKYSKNYESEGGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 182
           F+KY K YESE GKKDIQ+QLEK+KKYC+VIRVL HTQIRKMKGLKQKKAHLMEIQVNGG
Sbjct: 130 FTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLVHTQIRKMKGLKQKKAHLMEIQVNGG 189

Query: 183 DVAKKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 362
           DVAKKVDFAYSFFEKQ+PIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL
Sbjct: 190 DVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249

Query: 363 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQETHSASTEYDRTEKDI 542
           RKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK GQE+H A TEYDRTEKDI
Sbjct: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHCAVTEYDRTEKDI 309

Query: 543 TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVXXXXXXXXXXXXXALEEIKLKFIDTSSKF 722
           TP+GGFPHYGVVK+DYL+IKGCCVGPKKRVV             A+EEIKLKFIDTSSKF
Sbjct: 310 TPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKLKFIDTSSKF 369

Query: 723 GHGRFQTTEEKSKFYGRLKS 782
           GHGRFQTTEEK+KFYGRLK+
Sbjct: 370 GHGRFQTTEEKAKFYGRLKT 389


>gb|ABK94156.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  471 bits (1213), Expect = e-131
 Identities = 226/260 (86%), Positives = 241/260 (92%)
 Frame = +3

Query: 3   FSKYSKNYESEGGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 182
           F+KY K YESE GKKDIQ+QLEK+KKYC+VIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG
Sbjct: 130 FTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189

Query: 183 DVAKKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 362
           DVAKKVDFAYSFFEKQ+PIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL
Sbjct: 190 DVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249

Query: 363 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQETHSASTEYDRTEKDI 542
           RKVACIGAWHPARVSFTVARAGQNGYHHRTE++KKIYKLGK GQE+H A TEYDRTEKDI
Sbjct: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTELSKKIYKLGKCGQESHCAVTEYDRTEKDI 309

Query: 543 TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVXXXXXXXXXXXXXALEEIKLKFIDTSSKF 722
           TP+GGFPHYGVVK+DYL+IKGCCVGPKKRVV             A+EEIKLKFIDTSSKF
Sbjct: 310 TPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKLKFIDTSSKF 369

Query: 723 GHGRFQTTEEKSKFYGRLKS 782
           GHGRFQTTEEK+KFYGRLK+
Sbjct: 370 GHGRFQTTEEKAKFYGRLKT 389


>ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
           gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 389

 Score =  468 bits (1203), Expect = e-129
 Identities = 225/260 (86%), Positives = 240/260 (92%)
 Frame = +3

Query: 3   FSKYSKNYESEGGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 182
           F+KYSK +ESE GKKD Q QLEKMKKYC+VIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG
Sbjct: 130 FTKYSKKFESEEGKKDTQVQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189

Query: 183 DVAKKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 362
           DVA+KVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL
Sbjct: 190 DVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249

Query: 363 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQETHSASTEYDRTEKDI 542
           RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAG E+HSA TEYDRTEKDI
Sbjct: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGHESHSAITEYDRTEKDI 309

Query: 543 TPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVXXXXXXXXXXXXXALEEIKLKFIDTSSKF 722
           TP+GGFPHYG+VK+D+L+IKGCCVGPKKRVV             A+EEIK+KFIDTSSKF
Sbjct: 310 TPIGGFPHYGIVKEDFLMIKGCCVGPKKRVVTLRQSLLNQTSRVAMEEIKIKFIDTSSKF 369

Query: 723 GHGRFQTTEEKSKFYGRLKS 782
           GHGRFQT +EK+KFYGRLK+
Sbjct: 370 GHGRFQTAQEKAKFYGRLKA 389


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