BLASTX nr result

ID: Panax21_contig00013135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013135
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22115.3| unnamed protein product [Vitis vinifera]              496   e-138
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...   496   e-138
ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   491   e-137
ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containi...   484   e-134
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   482   e-134

>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  496 bits (1278), Expect = e-138
 Identities = 252/307 (82%), Positives = 265/307 (86%)
 Frame = +3

Query: 3    AASGQVDAAMKLHNSMTNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV 182
            +ASGQVD+AMKL+NSMTNAG                             EMKAMG+SVDV
Sbjct: 383  SASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDV 442

Query: 183  SASDVLMVYIKDASVDLALRWLRFMGSSGIRTNNFIVRQLFESCMKNGLYESAKPLLETY 362
            SASDVLMVYIKD SVDLALRWLRFMGSSGIRTNNFI+RQLFESCMKNGLYESAKPLLETY
Sbjct: 443  SASDVLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETY 502

Query: 363  VNSAAKVDLILYTSILAHLVRCQEEDNEKHLMLILSATKHKAHTFMCGLFTGPEQRKQPV 542
            VNSAAKVDLILYTSILAHLVRCQEE NE+HLMLILSATKHKAHTFMCGLFTGPEQRKQPV
Sbjct: 503  VNSAAKVDLILYTSILAHLVRCQEEQNERHLMLILSATKHKAHTFMCGLFTGPEQRKQPV 562

Query: 543  LSYVREFFQGIDYELEEGAAKYFXXXXXXXXXXMGQINRARCVWKVSYENKLFPKAIVFD 722
            LS+VREFFQ +DYELEEGAA+YF          MGQINRARCVWKV+YENKLFPKAIVFD
Sbjct: 563  LSFVREFFQSVDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFD 622

Query: 723  QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSS 902
            QHIAWSLDVRNLSVGAAL+AVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIV+AQML+S
Sbjct: 623  QHIAWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNS 682

Query: 903  VESPFEV 923
            VESPFEV
Sbjct: 683  VESPFEV 689


>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
            mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  496 bits (1278), Expect = e-138
 Identities = 252/307 (82%), Positives = 265/307 (86%)
 Frame = +3

Query: 3    AASGQVDAAMKLHNSMTNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV 182
            +ASGQVD+AMKL+NSMTNAG                             EMKAMG+SVDV
Sbjct: 470  SASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDV 529

Query: 183  SASDVLMVYIKDASVDLALRWLRFMGSSGIRTNNFIVRQLFESCMKNGLYESAKPLLETY 362
            SASDVLMVYIKD SVDLALRWLRFMGSSGIRTNNFI+RQLFESCMKNGLYESAKPLLETY
Sbjct: 530  SASDVLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETY 589

Query: 363  VNSAAKVDLILYTSILAHLVRCQEEDNEKHLMLILSATKHKAHTFMCGLFTGPEQRKQPV 542
            VNSAAKVDLILYTSILAHLVRCQEE NE+HLMLILSATKHKAHTFMCGLFTGPEQRKQPV
Sbjct: 590  VNSAAKVDLILYTSILAHLVRCQEEQNERHLMLILSATKHKAHTFMCGLFTGPEQRKQPV 649

Query: 543  LSYVREFFQGIDYELEEGAAKYFXXXXXXXXXXMGQINRARCVWKVSYENKLFPKAIVFD 722
            LS+VREFFQ +DYELEEGAA+YF          MGQINRARCVWKV+YENKLFPKAIVFD
Sbjct: 650  LSFVREFFQSVDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFD 709

Query: 723  QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSS 902
            QHIAWSLDVRNLSVGAAL+AVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIV+AQML+S
Sbjct: 710  QHIAWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNS 769

Query: 903  VESPFEV 923
            VESPFEV
Sbjct: 770  VESPFEV 776


>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
            predicted protein [Populus trichocarpa]
          Length = 785

 Score =  491 bits (1265), Expect = e-137
 Identities = 250/307 (81%), Positives = 263/307 (85%)
 Frame = +3

Query: 3    AASGQVDAAMKLHNSMTNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV 182
            AASGQVDAAMKL+NSMTNAG                             EMKAMG+SVDV
Sbjct: 413  AASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMGFSVDV 472

Query: 183  SASDVLMVYIKDASVDLALRWLRFMGSSGIRTNNFIVRQLFESCMKNGLYESAKPLLETY 362
            SASDVLMVYIKD SVDL+LRWLRFM SSGIRTNNFI+RQLFESCMKNGLYESAKPLLETY
Sbjct: 473  SASDVLMVYIKDGSVDLSLRWLRFMSSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETY 532

Query: 363  VNSAAKVDLILYTSILAHLVRCQEEDNEKHLMLILSATKHKAHTFMCGLFTGPEQRKQPV 542
            VNSAAKVDLILYTSILA+LVRCQEE NE+HLM ILSAT+HKAH FMCGLFTGPEQRKQPV
Sbjct: 533  VNSAAKVDLILYTSILAYLVRCQEEQNERHLMAILSATRHKAHAFMCGLFTGPEQRKQPV 592

Query: 543  LSYVREFFQGIDYELEEGAAKYFXXXXXXXXXXMGQINRARCVWKVSYENKLFPKAIVFD 722
            LS+VREFFQGIDYELEEGAAKYF          MGQINRARCVWKV+YENKLFPKAIVFD
Sbjct: 593  LSFVREFFQGIDYELEEGAAKYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFD 652

Query: 723  QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSS 902
            QHIAWSLDVRNLSVGAAL+AVVHTLHRFRKRMLYYGV+PRRIKLVTGPTL+IV+AQMLSS
Sbjct: 653  QHIAWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVIPRRIKLVTGPTLRIVVAQMLSS 712

Query: 903  VESPFEV 923
            VESPFEV
Sbjct: 713  VESPFEV 719


>ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
            mitochondrial-like [Glycine max]
          Length = 752

 Score =  484 bits (1245), Expect = e-134
 Identities = 247/307 (80%), Positives = 261/307 (85%)
 Frame = +3

Query: 3    AASGQVDAAMKLHNSMTNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV 182
            AASGQ+D AMKL+NSMTNAG                             EMKAMGYSVDV
Sbjct: 380  AASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV 439

Query: 183  SASDVLMVYIKDASVDLALRWLRFMGSSGIRTNNFIVRQLFESCMKNGLYESAKPLLETY 362
            +ASD+LMVYIK+ SVDLALRWLRFMGSSGIRTNNFI+RQLFESCMK+GL+ESAKPLLETY
Sbjct: 440  TASDILMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLFESAKPLLETY 499

Query: 363  VNSAAKVDLILYTSILAHLVRCQEEDNEKHLMLILSATKHKAHTFMCGLFTGPEQRKQPV 542
            VNSAAKVDLILYTSILAHLVRCQEE NE+HLM ILSATKHKAH+FMCGLFTGPE R QPV
Sbjct: 500  VNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILSATKHKAHSFMCGLFTGPEHRGQPV 559

Query: 543  LSYVREFFQGIDYELEEGAAKYFXXXXXXXXXXMGQINRARCVWKVSYENKLFPKAIVFD 722
            L++VREFFQGIDYELEEGAAKYF          MGQINRARCVWKV+YENKLFPKAIVFD
Sbjct: 560  LTFVREFFQGIDYELEEGAAKYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFD 619

Query: 723  QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSS 902
            QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYG+VPRRIKLVTG TLKIVIAQMLSS
Sbjct: 620  QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGIVPRRIKLVTGATLKIVIAQMLSS 679

Query: 903  VESPFEV 923
            VESPFEV
Sbjct: 680  VESPFEV 686


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  482 bits (1240), Expect = e-134
 Identities = 247/307 (80%), Positives = 260/307 (84%)
 Frame = +3

Query: 3    AASGQVDAAMKLHNSMTNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKAMGYSVDV 182
            AASGQVD+AMKL+NSMTNAG                             EMKAMG+SVDV
Sbjct: 474  AASGQVDSAMKLYNSMTNAGLKPGLSTYTALLTLLASKKLVDVAAKILLEMKAMGFSVDV 533

Query: 183  SASDVLMVYIKDASVDLALRWLRFMGSSGIRTNNFIVRQLFESCMKNGLYESAKPLLETY 362
            SASDVLMVYIKD SVDLALRWL FMGSSGIRTNNFI+RQLFESCMK GLYESAKPLLETY
Sbjct: 534  SASDVLMVYIKDGSVDLALRWLSFMGSSGIRTNNFIIRQLFESCMKKGLYESAKPLLETY 593

Query: 363  VNSAAKVDLILYTSILAHLVRCQEEDNEKHLMLILSATKHKAHTFMCGLFTGPEQRKQPV 542
            VNSAAKVDLILYTSILA+LVRCQEE +E+HLM IL AT+HKAH FMCGLFTGPEQR+QPV
Sbjct: 594  VNSAAKVDLILYTSILANLVRCQEEQHERHLMSILGATRHKAHAFMCGLFTGPEQRQQPV 653

Query: 543  LSYVREFFQGIDYELEEGAAKYFXXXXXXXXXXMGQINRARCVWKVSYENKLFPKAIVFD 722
            L +VREFFQGIDY+LEEGAAKYF          MGQINRARCVWKV+YENKLFPKAIVFD
Sbjct: 654  LFFVREFFQGIDYDLEEGAAKYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFD 713

Query: 723  QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSS 902
            QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIV+AQMLSS
Sbjct: 714  QHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLSS 773

Query: 903  VESPFEV 923
            VESPFEV
Sbjct: 774  VESPFEV 780


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