BLASTX nr result

ID: Panax21_contig00013133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013133
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...   461   e-127
ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]      443   e-122
ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4...   439   e-121

>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 799

 Score =  461 bits (1185), Expect = e-127
 Identities = 237/261 (90%), Positives = 250/261 (95%)
 Frame = +3

Query: 9    TAELRLLAKHNMDNRIVISNCGAIPLLVELLRSTDTQIQENAVTALLNLSIYDNNKTAIA 188
            TAELRLLAKHNMDNRIVI+NCGAI +LV LLRS D +IQENAVTALLNLSI DNNKTAIA
Sbjct: 536  TAELRLLAKHNMDNRIVIANCGAINILVNLLRSADAKIQENAVTALLNLSINDNNKTAIA 595

Query: 189  NAHAIEPLIHVLETGTPEAKENSAATLYSLSVIEDNKIRIGRSGAIPPLIDLLGNGTPRG 368
            NA AI PLIHVLETG+PEAKENSAATL+SLSVIEDNK+RIGRSGA+ PL+DLLGNGTPRG
Sbjct: 596  NADAIGPLIHVLETGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRG 655

Query: 369  RKDAATALFNLSIFHENKARIVQAGAVKYLVELMDPAAGMVDKAVAVLSNLATIPDGRAA 548
            +KDAATALFNLSIFHENKARIVQAGAVK+LVELMDPAAGMVDKAVAVL+NLATIP+GR A
Sbjct: 656  KKDAATALFNLSIFHENKARIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRTA 715

Query: 549  IGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAAPPLVALSQSGT 728
            IGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGA PPLVALSQSGT
Sbjct: 716  IGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAVPPLVALSQSGT 775

Query: 729  PRAKEKAQALLSYFRNQRHAN 791
            PRAKEKAQALLS+FRNQRH N
Sbjct: 776  PRAKEKAQALLSFFRNQRHGN 796


>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
            predicted protein [Populus trichocarpa]
          Length = 822

 Score =  456 bits (1174), Expect = e-126
 Identities = 237/266 (89%), Positives = 251/266 (94%)
 Frame = +3

Query: 3    DTTAELRLLAKHNMDNRIVISNCGAIPLLVELLRSTDTQIQENAVTALLNLSIYDNNKTA 182
            D TA+LRLLAKHNMDNRIVI+N GAI LLV LLRSTD +IQENAVTALLNLSI DNNKTA
Sbjct: 556  DATAKLRLLAKHNMDNRIVIANFGAISLLVNLLRSTDIKIQENAVTALLNLSINDNNKTA 615

Query: 183  IANAHAIEPLIHVLETGTPEAKENSAATLYSLSVIEDNKIRIGRSGAIPPLIDLLGNGTP 362
            I NA AIEPLIHVLETG+PEAKENSAATL+SLSVIEDNK+RIGRSGAI PL+DLLGNGTP
Sbjct: 616  IGNADAIEPLIHVLETGSPEAKENSAATLFSLSVIEDNKVRIGRSGAIVPLVDLLGNGTP 675

Query: 363  RGRKDAATALFNLSIFHENKARIVQAGAVKYLVELMDPAAGMVDKAVAVLSNLATIPDGR 542
            RG+KDAATALFNLSIFHENK RIVQAGAVK+LVELMDPAAGMVDKAVAVL+NLATIP+GR
Sbjct: 676  RGKKDAATALFNLSIFHENKDRIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGR 735

Query: 543  AAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAAPPLVALSQS 722
             AIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNS+RFC+ VLQEGA PPLVALSQS
Sbjct: 736  NAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCHMVLQEGAVPPLVALSQS 795

Query: 723  GTPRAKEKAQALLSYFRNQRHANGGR 800
            GTPRAKEKAQALLS+FRNQRH N GR
Sbjct: 796  GTPRAKEKAQALLSFFRNQRHGNAGR 821


>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
            predicted protein [Populus trichocarpa]
          Length = 698

 Score =  456 bits (1173), Expect = e-126
 Identities = 234/266 (87%), Positives = 252/266 (94%)
 Frame = +3

Query: 3    DTTAELRLLAKHNMDNRIVISNCGAIPLLVELLRSTDTQIQENAVTALLNLSIYDNNKTA 182
            D TA+LRLLAKHNMDNRIVI+NCG+I LLV LL STD +IQENAVTALLNLSI DNNKTA
Sbjct: 433  DATAKLRLLAKHNMDNRIVIANCGSIGLLVNLLCSTDKKIQENAVTALLNLSINDNNKTA 492

Query: 183  IANAHAIEPLIHVLETGTPEAKENSAATLYSLSVIEDNKIRIGRSGAIPPLIDLLGNGTP 362
            IANA AIEPLIHVLETG+PEAKENSAATL+SLSVIEDNK+RIGRSGA+ PL+DLLGNGTP
Sbjct: 493  IANADAIEPLIHVLETGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTP 552

Query: 363  RGRKDAATALFNLSIFHENKARIVQAGAVKYLVELMDPAAGMVDKAVAVLSNLATIPDGR 542
            RG+KDAATALFNLSIFHENKARIV+AGAVK+LV+LMDPAAGMVDKAVAVL+NLATIP+GR
Sbjct: 553  RGKKDAATALFNLSIFHENKARIVEAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPEGR 612

Query: 543  AAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAAPPLVALSQS 722
             AIGQEGGIPVLVEVVELGS RGKENAAAALLQLCTNS+RFC+ VLQEGA PPLVALSQS
Sbjct: 613  NAIGQEGGIPVLVEVVELGSVRGKENAAAALLQLCTNSSRFCHMVLQEGAVPPLVALSQS 672

Query: 723  GTPRAKEKAQALLSYFRNQRHANGGR 800
            GTPRAKEKAQ+LLSYFRNQRH N GR
Sbjct: 673  GTPRAKEKAQSLLSYFRNQRHGNAGR 698


>gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]
          Length = 790

 Score =  443 bits (1139), Expect = e-122
 Identities = 226/267 (84%), Positives = 247/267 (92%)
 Frame = +3

Query: 3    DTTAELRLLAKHNMDNRIVISNCGAIPLLVELLRSTDTQIQENAVTALLNLSIYDNNKTA 182
            + TAELRLLAKHNMDNR+VI+NCGAI  LV LL S D ++QE+AVTALLNLSI DNNK A
Sbjct: 524  NATAELRLLAKHNMDNRMVIANCGAISSLVNLLHSKDMKVQEDAVTALLNLSINDNNKCA 583

Query: 183  IANAHAIEPLIHVLETGTPEAKENSAATLYSLSVIEDNKIRIGRSGAIPPLIDLLGNGTP 362
            IANA AIEPLIHVL+TG+ EAKENSAATL+SLSV+E+NK++IGRSGAI PL+DLLGNGTP
Sbjct: 584  IANADAIEPLIHVLQTGSAEAKENSAATLFSLSVMEENKMKIGRSGAIKPLVDLLGNGTP 643

Query: 363  RGRKDAATALFNLSIFHENKARIVQAGAVKYLVELMDPAAGMVDKAVAVLSNLATIPDGR 542
            RG+KDAATALFNLSI HENK+RI+QAGAVKYLVELMDPA GMVDKAVAVLSNLATIP+GR
Sbjct: 644  RGKKDAATALFNLSILHENKSRIIQAGAVKYLVELMDPATGMVDKAVAVLSNLATIPEGR 703

Query: 543  AAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAAPPLVALSQS 722
            A IGQEGGIP+LVEVVELGSARGKENAAAALLQLCTNS+RFCN VLQEGA PPLVALSQS
Sbjct: 704  AEIGQEGGIPLLVEVVELGSARGKENAAAALLQLCTNSSRFCNMVLQEGAVPPLVALSQS 763

Query: 723  GTPRAKEKAQALLSYFRNQRHANGGRG 803
            GTPRA+EKAQ LLSYFRNQRH N GRG
Sbjct: 764  GTPRAREKAQQLLSYFRNQRHGNAGRG 790


>ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
            gi|449524872|ref|XP_004169445.1| PREDICTED: U-box
            domain-containing protein 4-like [Cucumis sativus]
          Length = 841

 Score =  439 bits (1130), Expect = e-121
 Identities = 227/265 (85%), Positives = 249/265 (93%)
 Frame = +3

Query: 9    TAELRLLAKHNMDNRIVISNCGAIPLLVELLRSTDTQIQENAVTALLNLSIYDNNKTAIA 188
            TAELRLLAKHNMDNRIVI+ CGAI  LV LL S D++IQENAVTALLNLSI DNNK+AIA
Sbjct: 577  TAELRLLAKHNMDNRIVIAQCGAIDYLVGLLLSEDSKIQENAVTALLNLSINDNNKSAIA 636

Query: 189  NAHAIEPLIHVLETGTPEAKENSAATLYSLSVIEDNKIRIGRSGAIPPLIDLLGNGTPRG 368
             A+AIEPLIHVL+TG+PEAKENSAATL+SLSVIE+NK++IGRSGAI PL++LLGNGTPRG
Sbjct: 637  QANAIEPLIHVLKTGSPEAKENSAATLFSLSVIEENKVKIGRSGAIGPLVELLGNGTPRG 696

Query: 369  RKDAATALFNLSIFHENKARIVQAGAVKYLVELMDPAAGMVDKAVAVLSNLATIPDGRAA 548
            +KDAATALFNLSIFHENKARIVQAGAV++LVELMDPAAGMVDKAVAVL+NLATIP+GR+A
Sbjct: 697  KKDAATALFNLSIFHENKARIVQAGAVRHLVELMDPAAGMVDKAVAVLANLATIPEGRSA 756

Query: 549  IGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAAPPLVALSQSGT 728
            IGQEGGIPVLVEVVELGSARGKENAAAALLQLCT SNR C+ VLQEGA PPLVALSQSGT
Sbjct: 757  IGQEGGIPVLVEVVELGSARGKENAAAALLQLCTTSNRHCSMVLQEGAVPPLVALSQSGT 816

Query: 729  PRAKEKAQALLSYFRNQRHANGGRG 803
             RAKEKAQALLS+FR+QRH N GRG
Sbjct: 817  ARAKEKAQALLSHFRSQRHGNSGRG 841


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