BLASTX nr result

ID: Panax21_contig00013130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013130
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329243.1| predicted protein [Populus trichocarpa] gi|2...   162   9e-38
emb|CAN67491.1| hypothetical protein VITISV_035977 [Vitis vinifera]   162   1e-37
emb|CBI16905.3| unnamed protein product [Vitis vinifera]              159   8e-37
ref|XP_002278644.1| PREDICTED: WPP domain-interacting tail-ancho...   159   8e-37
ref|XP_002533487.1| DNA double-strand break repair rad50 ATPase,...   159   1e-36

>ref|XP_002329243.1| predicted protein [Populus trichocarpa] gi|222870697|gb|EEF07828.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  162 bits (411), Expect = 9e-38
 Identities = 85/116 (73%), Positives = 98/116 (84%)
 Frame = +2

Query: 191 LQHVVVSTEASQEKQSMLDSTIKDMENLIEDLKLKVLKAERLAESAEDKCITLSESNSDL 370
           LQH V S EASQEKQ+ML +TI+DMENLIE LK KV KAE  A+S EDKCI LSE+NSDL
Sbjct: 476 LQHAVASAEASQEKQNMLYATIRDMENLIEGLKSKVSKAESRADSVEDKCIILSETNSDL 535

Query: 371 NEELCFLRGRMDCLKVSLHQAEETKKATRKDIRIQTKLITDLVMQLALERERLQKQ 538
           NEEL FLRGR++CL+ SL+QAEE K AT KDI I++K+ITDLVMQLA+ERERL KQ
Sbjct: 536 NEELSFLRGRLECLEASLNQAEEKKMATAKDICIRSKVITDLVMQLAIERERLHKQ 591


>emb|CAN67491.1| hypothetical protein VITISV_035977 [Vitis vinifera]
          Length = 737

 Score =  162 bits (410), Expect = 1e-37
 Identities = 85/119 (71%), Positives = 98/119 (82%)
 Frame = +2

Query: 185 ILLQHVVVSTEASQEKQSMLDSTIKDMENLIEDLKLKVLKAERLAESAEDKCITLSESNS 364
           I LQH + S EAS EKQSML STI+DMENLIEDLKLKV KAE  A+  E+KCI LSESN+
Sbjct: 476 IQLQHALASAEASLEKQSMLYSTIEDMENLIEDLKLKVSKAESRADCTEEKCIILSESNA 535

Query: 365 DLNEELCFLRGRMDCLKVSLHQAEETKKATRKDIRIQTKLITDLVMQLALERERLQKQY 541
           +L+EEL FLR RM+CL+ SLHQAEETK  T KDI ++TK+IT+LVMQLA ERERL KQY
Sbjct: 536 ELSEELSFLRTRMECLETSLHQAEETKVETAKDISVRTKVITNLVMQLAFERERLHKQY 594


>emb|CBI16905.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  159 bits (403), Expect = 8e-37
 Identities = 84/118 (71%), Positives = 97/118 (82%)
 Frame = +2

Query: 185 ILLQHVVVSTEASQEKQSMLDSTIKDMENLIEDLKLKVLKAERLAESAEDKCITLSESNS 364
           I LQH + S EAS EKQSML STI+DMENLIEDLKLKV KAE  A+  E+KCI LSESN+
Sbjct: 419 IQLQHALASAEASLEKQSMLYSTIEDMENLIEDLKLKVSKAESRADCTEEKCIILSESNA 478

Query: 365 DLNEELCFLRGRMDCLKVSLHQAEETKKATRKDIRIQTKLITDLVMQLALERERLQKQ 538
           +L+EEL FLR RM+CL+ SLHQAEETK  T KDI ++TK+IT+LVMQLA ERERL KQ
Sbjct: 479 ELSEELSFLRTRMECLETSLHQAEETKVETAKDISVRTKVITNLVMQLAFERERLHKQ 536


>ref|XP_002278644.1| PREDICTED: WPP domain-interacting tail-anchored protein 1-like
           [Vitis vinifera]
          Length = 707

 Score =  159 bits (403), Expect = 8e-37
 Identities = 84/118 (71%), Positives = 97/118 (82%)
 Frame = +2

Query: 185 ILLQHVVVSTEASQEKQSMLDSTIKDMENLIEDLKLKVLKAERLAESAEDKCITLSESNS 364
           I LQH + S EAS EKQSML STI+DMENLIEDLKLKV KAE  A+  E+KCI LSESN+
Sbjct: 469 IQLQHALASAEASLEKQSMLYSTIEDMENLIEDLKLKVSKAESRADCTEEKCIILSESNA 528

Query: 365 DLNEELCFLRGRMDCLKVSLHQAEETKKATRKDIRIQTKLITDLVMQLALERERLQKQ 538
           +L+EEL FLR RM+CL+ SLHQAEETK  T KDI ++TK+IT+LVMQLA ERERL KQ
Sbjct: 529 ELSEELSFLRTRMECLETSLHQAEETKVETAKDISVRTKVITNLVMQLAFERERLHKQ 586


>ref|XP_002533487.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
           communis] gi|223526649|gb|EEF28891.1| DNA double-strand
           break repair rad50 ATPase, putative [Ricinus communis]
          Length = 631

 Score =  159 bits (401), Expect = 1e-36
 Identities = 81/118 (68%), Positives = 101/118 (85%)
 Frame = +2

Query: 185 ILLQHVVVSTEASQEKQSMLDSTIKDMENLIEDLKLKVLKAERLAESAEDKCITLSESNS 364
           I LQH V S +AS+EKQ+ML +TI+DMENLI+DLKLKVLKAE  A+SAEDKCI LSESN+
Sbjct: 403 IQLQHAVASVDASEEKQNMLYATIRDMENLIKDLKLKVLKAETRADSAEDKCIILSESNA 462

Query: 365 DLNEELCFLRGRMDCLKVSLHQAEETKKATRKDIRIQTKLITDLVMQLALERERLQKQ 538
           +L EE+ FLRG++ CL+ SL++AEETK AT +DI I+TK++ DLVMQL +ERERLQKQ
Sbjct: 463 ELAEEMSFLRGKLVCLESSLNRAEETKNATARDIGIRTKVVMDLVMQLGIERERLQKQ 520


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