BLASTX nr result

ID: Panax21_contig00013125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013125
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   132   2e-29
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   115   4e-24
ref|XP_002540140.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
ref|XP_002540178.1| hypothetical protein RCOM_2136480 [Ricinus c...   115   4e-24

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NSSEEFAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVFVEYHSLLDD 198
           + +E F+KG  VEVSSDE+GFKGAWYVATI+                    VEY  LL D
Sbjct: 3   SGTEIFSKGSLVEVSSDEDGFKGAWYVATILESPPKSASKKRSR-----ALVEYQDLLVD 57

Query: 197 D-GSKPLREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRVLDDSRFVVF 21
           D GSKPL E V+ +F+RP PP       F +ND+VDAFYRDGWWTGVITR+ +DS+  VF
Sbjct: 58  DVGSKPLTEVVDTSFLRPLPPPEADTN-FCVNDIVDAFYRDGWWTGVITRISEDSKCTVF 116

Query: 20  FQNPPD 3
           FQNPPD
Sbjct: 117 FQNPPD 122



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 46/104 (44%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = -2

Query: 320 GFKGAWYVATIINXXXXXXXXXXXXXXXXKVFVEYHSLLDD-DGSKPLREFVNLNFIRPN 144
           G  G+WYVA II                 +  VEY  LLD  DGS+ LRE V+  F+RP 
Sbjct: 163 GLGGSWYVAKII------------MAEKSRALVEYQDLLDGKDGSRRLREVVDTLFLRPL 210

Query: 143 PPESEKVQCFELNDVVDAFYRDGWWTGVITRVLDDSRFVVFFQN 12
           PP  E    F   D+VD FY DGW TGVI   + DS++ VFF N
Sbjct: 211 PP-LETNASFGEYDIVDTFYHDGWCTGVII-CIKDSKYTVFFSN 252



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/117 (33%), Positives = 59/117 (50%)
 Frame = -2

Query: 362 FAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVFVEYHSLLDDDGSKP 183
           F+ G  VEV+ +E+  + AW+ A +                     V+  SL +   +  
Sbjct: 286 FSPGAAVEVTLNEQSSRDAWFPAIV-----------RREIGLGSYVVQCQSLKNSGEAGV 334

Query: 182 LREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRVLDDSRFVVFFQN 12
           L   V+   IRP+PP  E  + F L + VDAFY  GWW G++T+VL   R+VVFF++
Sbjct: 335 LDVTVDNLHIRPSPPRLEGRK-FGLLEKVDAFYDYGWWNGIVTKVLTGRRYVVFFKH 390


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NSSEEFAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVFVEYHSLLDD 198
           + +E F+KG  VEVSSDE+GFKGAWYVATI+                    VEY  LL D
Sbjct: 3   SGTEIFSKGSLVEVSSDEDGFKGAWYVATILESPPKSASKKRSR-----ALVEYQDLLVD 57

Query: 197 D-GSKPLREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRVLDDSRFVVF 21
           D GSKPL E V+ +F+RP PP       F +ND+VDAFYRDGWWTGVITR+ +DS+  VF
Sbjct: 58  DVGSKPLTEVVDTSFLRPLPPPEADTN-FCVNDIVDAFYRDGWWTGVITRISEDSKCTVF 116

Query: 20  FQNPPD 3
           FQNPPD
Sbjct: 117 FQNPPD 122



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/117 (33%), Positives = 59/117 (50%)
 Frame = -2

Query: 362 FAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVFVEYHSLLDDDGSKP 183
           F+ G  VEV+ +E+  + AW+ A +                     V+  SL +   +  
Sbjct: 155 FSPGAAVEVTLNEQSSRDAWFPAIV-----------RREIGLGSYVVQCQSLKNSGEAGV 203

Query: 182 LREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRVLDDSRFVVFFQN 12
           L   V+   IRP+PP  E  + F L + VDAFY  GWW G++T+VL   R+VVFF++
Sbjct: 204 LDVTVDNLHIRPSPPRLEGRK-FGLLEKVDAFYDYGWWNGIVTKVLTGRRYVVFFKH 259


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
           gi|223545236|gb|EEF46744.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 689

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/142 (43%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
 Frame = -2

Query: 404 MGGAPVQHLNSSEEFAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVF 225
           MGG      NS   F+ G  VEVSSDEEGF+GAWY ATI+                    
Sbjct: 1   MGGGRPSRQNSGRNFSIGDLVEVSSDEEGFRGAWYEATILKSLSSSRSCYSKRKAE--AL 58

Query: 224 VEYHSLLDD-DGSKPLREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRV 48
           V+Y +LL D D  KPL E+V+ +FIRP PP    +  FE  DVVDAF+RDGWW G++T+V
Sbjct: 59  VQYRNLLSDTDEKKPLTEYVDFSFIRPLPPVPSTIPAFEPLDVVDAFHRDGWWKGIVTKV 118

Query: 47  -------LDDSRFVVFFQNPPD 3
                   +  ++ V F+NPP+
Sbjct: 119 DVFEDDKTNSKKYTVVFENPPE 140



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
 Frame = -2

Query: 362 FAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVFVEYHSLLDDDGSK- 186
           F+KG  VEV+ D+E  + AW+ AT++                    V ++S L D GS  
Sbjct: 174 FSKGMAVEVNLDKENLEDAWFPATVLEE------------------VGFNSFLLDCGSSN 215

Query: 185 -PLREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRVLDDSRFVV 24
             ++E V+   IRP PP+ +  + FE+ + VD F+   W   +I ++L + R+ V
Sbjct: 216 GHIKETVDCFHIRPPPPKLDITE-FEILEAVDVFHESSWREALIIKILTEGRYSV 269


>ref|XP_002540140.1| conserved hypothetical protein [Ricinus communis]
           gi|223498851|gb|EEF22243.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/142 (43%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
 Frame = -2

Query: 404 MGGAPVQHLNSSEEFAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVF 225
           MGG      NS   F+ G  VEVSSDEEGF+GAWY ATI+                    
Sbjct: 1   MGGGRSSRQNSGRNFSIGDLVEVSSDEEGFRGAWYEATILKSLSSSRSCYSKRKAE--AL 58

Query: 224 VEYHSLLDD-DGSKPLREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRV 48
           V+Y +LL D D  KPL E+V+ +FIRP PP    +  FE  DVVDAF+RDGWW G++T+V
Sbjct: 59  VQYRNLLSDTDEKKPLTEYVDFSFIRPLPPVPSTIPAFEPLDVVDAFHRDGWWKGIVTKV 118

Query: 47  -------LDDSRFVVFFQNPPD 3
                   +  ++ V F+NPP+
Sbjct: 119 DVFEDDKTNSKKYTVVFENPPE 140


>ref|XP_002540178.1| hypothetical protein RCOM_2136480 [Ricinus communis]
           gi|223498471|gb|EEF22205.1| hypothetical protein
           RCOM_2136480 [Ricinus communis]
          Length = 167

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/142 (43%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
 Frame = -2

Query: 404 MGGAPVQHLNSSEEFAKGCQVEVSSDEEGFKGAWYVATIINXXXXXXXXXXXXXXXXKVF 225
           MGG      NS   F+ G  VEVSSDEEGF+GAWY ATI+                    
Sbjct: 1   MGGGRSSRQNSGRNFSIGDLVEVSSDEEGFRGAWYEATILKSLSSSRSCYSKRKAE--AL 58

Query: 224 VEYHSLLDD-DGSKPLREFVNLNFIRPNPPESEKVQCFELNDVVDAFYRDGWWTGVITRV 48
           V+Y +LL D D  KPL E+V+ +FIRP PP    +  FE  DVVDAF+RDGWW G++T+V
Sbjct: 59  VQYRTLLSDTDEKKPLTEYVDFSFIRPFPPVPSTIPAFEPLDVVDAFHRDGWWKGIVTKV 118

Query: 47  -------LDDSRFVVFFQNPPD 3
                   +  ++ V F+NPP+
Sbjct: 119 DVFEDDKTNSKKYTVVFENPPE 140


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