BLASTX nr result

ID: Panax21_contig00013085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013085
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   454   e-126
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              454   e-126
dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare]    444   e-122
emb|CBH32617.1| ATP binding protein, putative, expressed [Tritic...   444   e-122
ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helica...   440   e-121

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1178

 Score =  454 bits (1169), Expect = e-126
 Identities = 228/285 (80%), Positives = 242/285 (84%)
 Frame = +3

Query: 3    GASCSIICTQPRRISAMSVAERVASERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGIXX 182
            GA CSIICTQPRRISAMSV+ERVA+ERGEKLGESVGYKVRLEGM+GRDTRLLFCTTGI  
Sbjct: 329  GAFCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILL 388

Query: 183  XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 362
                      GVTHVIVDEIHERGMNEDFLLIV               MSATLNAELFSS
Sbjct: 389  RRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSS 448

Query: 363  YFSGAPMIHIPGFTYPVRSLFLENILEMTGYRLTTYNQIDNYGQDKMWKMQKQTLRKRKS 542
            YF GAP IHIPGFTYPVR+ FLENILEMTGYRLT YNQID+YGQ+K+WKMQKQ LRKRKS
Sbjct: 449  YFGGAPSIHIPGFTYPVRTHFLENILEMTGYRLTPYNQIDDYGQEKVWKMQKQALRKRKS 508

Query: 543  QIASSVEDALEAVDFREYSPRIRESLSCWNPDSIGFNLIEHVLDHICRKERPGAILVFMT 722
            QIASSVEDALE  +F  YSPR ++SLSCWNPDSIGFNLIEH L HI +KERPGA+LVFMT
Sbjct: 509  QIASSVEDALEVANFDAYSPRTQDSLSCWNPDSIGFNLIEHALCHIVKKERPGAVLVFMT 568

Query: 723  GWDDINSLKGQLEAHPLLGDPSKVLLLACHGSMDSSEQRLIFNKP 857
            GWDDINSLK QLEAHPLLGDPS+VLLLACHGSM SSEQRLIF+KP
Sbjct: 569  GWDDINSLKDQLEAHPLLGDPSRVLLLACHGSMASSEQRLIFDKP 613


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  454 bits (1169), Expect = e-126
 Identities = 228/285 (80%), Positives = 242/285 (84%)
 Frame = +3

Query: 3    GASCSIICTQPRRISAMSVAERVASERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGIXX 182
            GA CSIICTQPRRISAMSV+ERVA+ERGEKLGESVGYKVRLEGM+GRDTRLLFCTTGI  
Sbjct: 208  GAFCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILL 267

Query: 183  XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 362
                      GVTHVIVDEIHERGMNEDFLLIV               MSATLNAELFSS
Sbjct: 268  RRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSS 327

Query: 363  YFSGAPMIHIPGFTYPVRSLFLENILEMTGYRLTTYNQIDNYGQDKMWKMQKQTLRKRKS 542
            YF GAP IHIPGFTYPVR+ FLENILEMTGYRLT YNQID+YGQ+K+WKMQKQ LRKRKS
Sbjct: 328  YFGGAPSIHIPGFTYPVRTHFLENILEMTGYRLTPYNQIDDYGQEKVWKMQKQALRKRKS 387

Query: 543  QIASSVEDALEAVDFREYSPRIRESLSCWNPDSIGFNLIEHVLDHICRKERPGAILVFMT 722
            QIASSVEDALE  +F  YSPR ++SLSCWNPDSIGFNLIEH L HI +KERPGA+LVFMT
Sbjct: 388  QIASSVEDALEVANFDAYSPRTQDSLSCWNPDSIGFNLIEHALCHIVKKERPGAVLVFMT 447

Query: 723  GWDDINSLKGQLEAHPLLGDPSKVLLLACHGSMDSSEQRLIFNKP 857
            GWDDINSLK QLEAHPLLGDPS+VLLLACHGSM SSEQRLIF+KP
Sbjct: 448  GWDDINSLKDQLEAHPLLGDPSRVLLLACHGSMASSEQRLIFDKP 492


>dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1247

 Score =  444 bits (1142), Expect = e-122
 Identities = 219/285 (76%), Positives = 245/285 (85%)
 Frame = +3

Query: 3    GASCSIICTQPRRISAMSVAERVASERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGIXX 182
            GA+CSIICTQPRRISA+SV+ERVA+ERGEK+GESVGYKVRLEGMRGRDTRLLFCTTG+  
Sbjct: 384  GATCSIICTQPRRISAISVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLL 443

Query: 183  XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 362
                      GVTHVIVDEIHERGMNEDFLLIV               MSATLNAE+FSS
Sbjct: 444  RRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSATLNAEMFSS 503

Query: 363  YFSGAPMIHIPGFTYPVRSLFLENILEMTGYRLTTYNQIDNYGQDKMWKMQKQTLRKRKS 542
            YF GAPMIHIPGFTYPVRS FLE+ILE+TG+RLT YNQID+YGQ+K WKMQKQ LRKRKS
Sbjct: 504  YFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLTPYNQIDDYGQEKSWKMQKQALRKRKS 563

Query: 543  QIASSVEDALEAVDFREYSPRIRESLSCWNPDSIGFNLIEHVLDHICRKERPGAILVFMT 722
            QIAS VEDA++A D R+YSP+ R+SLSCWNPDSIGFNLIE+VL HIC+KER GA+LVFMT
Sbjct: 564  QIASVVEDAVKAADLRDYSPQTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVFMT 623

Query: 723  GWDDINSLKGQLEAHPLLGDPSKVLLLACHGSMDSSEQRLIFNKP 857
            GWDDIN+LK QL+++PLLGDPSKVLLLACHGSM SSEQ+LIF+KP
Sbjct: 624  GWDDINTLKDQLQSNPLLGDPSKVLLLACHGSMASSEQKLIFDKP 668


>emb|CBH32617.1| ATP binding protein, putative, expressed [Triticum aestivum]
          Length = 1072

 Score =  444 bits (1142), Expect = e-122
 Identities = 219/285 (76%), Positives = 245/285 (85%)
 Frame = +3

Query: 3    GASCSIICTQPRRISAMSVAERVASERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGIXX 182
            GA+CSIICTQPRRISA+SV+ERVA+ERGEK+GESVGYKVRLEGMRGRDTRLLFCTTG+  
Sbjct: 209  GATCSIICTQPRRISAISVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLL 268

Query: 183  XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 362
                      GVTHVIVDEIHERGMNEDFLLIV               MSATLNAE+FSS
Sbjct: 269  RRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSATLNAEMFSS 328

Query: 363  YFSGAPMIHIPGFTYPVRSLFLENILEMTGYRLTTYNQIDNYGQDKMWKMQKQTLRKRKS 542
            YF GAPMIHIPGFTYPVRS FLE+ILE+TG+RLT YNQID+YGQ+K WKMQKQ LRKRKS
Sbjct: 329  YFGGAPMIHIPGFTYPVRSRFLEDILEVTGHRLTPYNQIDDYGQEKSWKMQKQALRKRKS 388

Query: 543  QIASSVEDALEAVDFREYSPRIRESLSCWNPDSIGFNLIEHVLDHICRKERPGAILVFMT 722
            QIAS VEDA++A D R+YSP+ R+SLSCWNPDSIGFNLIE+VL HIC+KER GA+LVFMT
Sbjct: 389  QIASVVEDAVKAADLRDYSPQTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVFMT 448

Query: 723  GWDDINSLKGQLEAHPLLGDPSKVLLLACHGSMDSSEQRLIFNKP 857
            GWDDIN+LK QL+++PLLGDPSKVLLLACHGSM SSEQ+LIF+KP
Sbjct: 449  GWDDINTLKDQLQSNPLLGDPSKVLLLACHGSMASSEQKLIFDKP 493


>ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
            [Brachypodium distachyon]
          Length = 1247

 Score =  440 bits (1132), Expect = e-121
 Identities = 216/285 (75%), Positives = 244/285 (85%)
 Frame = +3

Query: 3    GASCSIICTQPRRISAMSVAERVASERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGIXX 182
            GA+CS+ICTQPRRISA++V+ERVA+ERGEK+GESVGYKVRLEGMRGRDTRLLFCTTG+  
Sbjct: 391  GATCSVICTQPRRISAITVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLL 450

Query: 183  XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 362
                      GVTHVIVDEIHERGMNEDFLLIV               MSATLNA+LFSS
Sbjct: 451  RRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSATLNADLFSS 510

Query: 363  YFSGAPMIHIPGFTYPVRSLFLENILEMTGYRLTTYNQIDNYGQDKMWKMQKQTLRKRKS 542
            YF GAPMIHIPGFTYPVRS FLE+ILE+TG+RLT+YNQID+YGQ+K WKMQKQ +RKRKS
Sbjct: 511  YFGGAPMIHIPGFTYPVRSRFLEDILEVTGHRLTSYNQIDDYGQEKSWKMQKQAIRKRKS 570

Query: 543  QIASSVEDALEAVDFREYSPRIRESLSCWNPDSIGFNLIEHVLDHICRKERPGAILVFMT 722
            QIAS VEDA++A D R+YS R R+SLSCWNPDSIGFNLIE+VL HIC+KER GA+LVFMT
Sbjct: 571  QIASVVEDAVKAADLRDYSSRTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVFMT 630

Query: 723  GWDDINSLKGQLEAHPLLGDPSKVLLLACHGSMDSSEQRLIFNKP 857
            GWDDIN+LK QL+A+PLLGDP+KVLLLACHGSM SSEQ+LIF KP
Sbjct: 631  GWDDINALKEQLQANPLLGDPNKVLLLACHGSMPSSEQKLIFEKP 675


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