BLASTX nr result

ID: Panax21_contig00013067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013067
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putat...   503   e-140
ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing sub...   501   e-139
emb|CBI30888.3| unnamed protein product [Vitis vinifera]              501   e-139
ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139
ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing sub...   496   e-138

>ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
            gi|223541100|gb|EEF42656.1| Katanin p60 ATPase-containing
            subunit, putative [Ricinus communis]
          Length = 408

 Score =  503 bits (1295), Expect = e-140
 Identities = 249/272 (91%), Positives = 261/272 (95%)
 Frame = -1

Query: 1207 KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASS 1028
            KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS
Sbjct: 137  KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASS 196

Query: 1027 VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ 848
            VVSKWRGDSEKL+KVLFELARHHAPSTIF+DEIDAIISQRGE RSEHEASRRLKTELLIQ
Sbjct: 197  VVSKWRGDSEKLIKVLFELARHHAPSTIFIDEIDAIISQRGEGRSEHEASRRLKTELLIQ 256

Query: 847  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPAPDEE 668
            MDGLT+T+ELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM+EELLPP PDE+
Sbjct: 257  MDGLTRTEELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMYEELLPPQPDED 316

Query: 667  KLPYDLLVERTEGYSGSDIRLVCKETAMQPLRRLMACLEEKQEVVPEDELPKVGPIRQED 488
            KLPYDLLVERTEG+SGSDIRL+CKE AMQPLRRLMA LE++QEVVP+DELPKVGPI  ED
Sbjct: 317  KLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRLMALLEDRQEVVPDDELPKVGPITPED 376

Query: 487  VEVALKNTRPSAHLHTPRYEKFNNDYGSQILQ 392
            +E ALKNTRPSAHLH  RYEKFN DYGSQILQ
Sbjct: 377  IETALKNTRPSAHLHAHRYEKFNADYGSQILQ 408


>ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing subunit A-like 2 [Vitis
            vinifera]
          Length = 406

 Score =  501 bits (1290), Expect = e-139
 Identities = 249/272 (91%), Positives = 259/272 (95%)
 Frame = -1

Query: 1207 KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASS 1028
            KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS
Sbjct: 135  KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASS 194

Query: 1027 VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ 848
            VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDA+ISQRGE RSEHEASRRLKTELL+Q
Sbjct: 195  VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDALISQRGEGRSEHEASRRLKTELLVQ 254

Query: 847  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPAPDEE 668
            MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLP  P EE
Sbjct: 255  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSVPGEE 314

Query: 667  KLPYDLLVERTEGYSGSDIRLVCKETAMQPLRRLMACLEEKQEVVPEDELPKVGPIRQED 488
            KLPYDL+VERTEGYSGSDIRL+CKE AMQPLRRLMA LE+K EVVPE+ELPKVGPI+ +D
Sbjct: 315  KLPYDLMVERTEGYSGSDIRLLCKEAAMQPLRRLMAHLEDKAEVVPEEELPKVGPIKHDD 374

Query: 487  VEVALKNTRPSAHLHTPRYEKFNNDYGSQILQ 392
            +E ALKNTRPSAHLH  RY+KFN DYGSQILQ
Sbjct: 375  IETALKNTRPSAHLHVHRYDKFNTDYGSQILQ 406


>emb|CBI30888.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  501 bits (1290), Expect = e-139
 Identities = 249/272 (91%), Positives = 259/272 (95%)
 Frame = -1

Query: 1207 KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASS 1028
            KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS
Sbjct: 126  KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASS 185

Query: 1027 VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ 848
            VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDA+ISQRGE RSEHEASRRLKTELL+Q
Sbjct: 186  VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDALISQRGEGRSEHEASRRLKTELLVQ 245

Query: 847  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPAPDEE 668
            MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLP  P EE
Sbjct: 246  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSVPGEE 305

Query: 667  KLPYDLLVERTEGYSGSDIRLVCKETAMQPLRRLMACLEEKQEVVPEDELPKVGPIRQED 488
            KLPYDL+VERTEGYSGSDIRL+CKE AMQPLRRLMA LE+K EVVPE+ELPKVGPI+ +D
Sbjct: 306  KLPYDLMVERTEGYSGSDIRLLCKEAAMQPLRRLMAHLEDKAEVVPEEELPKVGPIKHDD 365

Query: 487  VEVALKNTRPSAHLHTPRYEKFNNDYGSQILQ 392
            +E ALKNTRPSAHLH  RY+KFN DYGSQILQ
Sbjct: 366  IETALKNTRPSAHLHVHRYDKFNTDYGSQILQ 397


>ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|222848667|gb|EEE86214.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  499 bits (1286), Expect = e-139
 Identities = 249/272 (91%), Positives = 259/272 (95%)
 Frame = -1

Query: 1207 KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASS 1028
            KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS
Sbjct: 113  KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASS 172

Query: 1027 VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ 848
            VVSKWRGDSEKL+KVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ
Sbjct: 173  VVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ 232

Query: 847  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPAPDEE 668
            MDGLT+T+ELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEAR AMFEELLP  PDEE
Sbjct: 233  MDGLTRTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARAAMFEELLPSQPDEE 292

Query: 667  KLPYDLLVERTEGYSGSDIRLVCKETAMQPLRRLMACLEEKQEVVPEDELPKVGPIRQED 488
            KLPYDLLVERTEG+SGSDIRL+CKE AMQPLRR+M  LE+ +EVVPEDELPKVGPIR ED
Sbjct: 293  KLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRIMTLLEDTEEVVPEDELPKVGPIRPED 352

Query: 487  VEVALKNTRPSAHLHTPRYEKFNNDYGSQILQ 392
            +E ALKNTRPSAHLH  RY+KFN DYGSQILQ
Sbjct: 353  IETALKNTRPSAHLHAHRYDKFNADYGSQILQ 384


>ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
            [Glycine max]
          Length = 403

 Score =  496 bits (1277), Expect = e-138
 Identities = 246/272 (90%), Positives = 260/272 (95%)
 Frame = -1

Query: 1207 KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASS 1028
            KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS
Sbjct: 132  KRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASS 191

Query: 1027 VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ 848
            VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ
Sbjct: 192  VVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQ 251

Query: 847  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPAPDEE 668
            MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEP ARRAMFEELLP  PDEE
Sbjct: 252  MDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEELLPQQPDEE 311

Query: 667  KLPYDLLVERTEGYSGSDIRLVCKETAMQPLRRLMACLEEKQEVVPEDELPKVGPIRQED 488
             +PYD+LV++TEGYSGSDIRL+CKETAMQPLRRLM+ LE+ Q+VVPE+ELPKVGPI+ ED
Sbjct: 312  PIPYDILVDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQSQDVVPEEELPKVGPIKSED 371

Query: 487  VEVALKNTRPSAHLHTPRYEKFNNDYGSQILQ 392
            +E AL+NTRPSAHLH  +Y+KFN DYGSQILQ
Sbjct: 372  IETALRNTRPSAHLHAHKYDKFNADYGSQILQ 403


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