BLASTX nr result

ID: Panax21_contig00013058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013058
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 1...   248   4e-64
emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]   248   4e-64
ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus ...   230   8e-59

>ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 688

 Score =  248 bits (633), Expect = 4e-64
 Identities = 125/169 (73%), Positives = 148/169 (87%)
 Frame = +2

Query: 8   LPPSTILCLTELFSVIRRAKFLIERCKEGSSLWNLMQTGLISNQYHVAVKEMGNALDILP 187
           LPPS+ILCLTELFSVIRR K  I+ CK+ SSLW+L+QT LIS+Q+HV VKEMG ALDILP
Sbjct: 69  LPPSSILCLTELFSVIRRVKSFIQGCKDASSLWSLVQTELISSQFHVVVKEMGRALDILP 128

Query: 188 LSLLKITTDTREQVELLRKQAKRAELFVEPREIQRREELLLVMAIYNDRNNKNKCVIDFD 367
           LSLL IT D REQVELL KQAKR +LFV+PRE+QRREELL VMA  N++N KNK ++DF 
Sbjct: 129 LSLLNITADIREQVELLHKQAKRVDLFVDPRELQRREELLQVMATNNEKNAKNKALVDFR 188

Query: 368 KMKEILTSIGVRSPLEFEKEISKLEAEVDKQAGTGGLIVVSNINNLMSL 514
           ++KEIL+SIG+RSPL++++EISKLEAE  KQAGTGGLIVVSNINNL+SL
Sbjct: 189 EVKEILSSIGLRSPLDYDEEISKLEAEAQKQAGTGGLIVVSNINNLISL 237


>emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]
          Length = 668

 Score =  248 bits (633), Expect = 4e-64
 Identities = 125/169 (73%), Positives = 148/169 (87%)
 Frame = +2

Query: 8   LPPSTILCLTELFSVIRRAKFLIERCKEGSSLWNLMQTGLISNQYHVAVKEMGNALDILP 187
           LPPS+ILCLTELFSVIRR K  I+ CK+ SSLW+L+QT LIS+Q+HV VKEMG ALDILP
Sbjct: 69  LPPSSILCLTELFSVIRRVKSFIQGCKDASSLWSLVQTELISSQFHVVVKEMGRALDILP 128

Query: 188 LSLLKITTDTREQVELLRKQAKRAELFVEPREIQRREELLLVMAIYNDRNNKNKCVIDFD 367
           LSLL IT D REQVELL KQAKR +LFV+PRE+QRREELL VMA  N++N KNK ++DF 
Sbjct: 129 LSLLNITADIREQVELLHKQAKRVDLFVDPRELQRREELLQVMATNNEKNAKNKALVDFR 188

Query: 368 KMKEILTSIGVRSPLEFEKEISKLEAEVDKQAGTGGLIVVSNINNLMSL 514
           ++KEIL+SIG+RSPL++++EISKLEAE  KQAGTGGLIVVSNINNL+SL
Sbjct: 189 EVKEILSSIGLRSPLDYDEEISKLEAEAQKQAGTGGLIVVSNINNLISL 237


>ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|222851063|gb|EEE88610.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  243 bits (619), Expect = 2e-62
 Identities = 119/171 (69%), Positives = 147/171 (85%)
 Frame = +2

Query: 2   SSLPPSTILCLTELFSVIRRAKFLIERCKEGSSLWNLMQTGLISNQYHVAVKEMGNALDI 181
           S LPPS++LCLTELFSVI+R K LI+RCK GSSLW L+QT  +SNQ+H  VKEMG ALDI
Sbjct: 67  SPLPPSSLLCLTELFSVIQRVKLLIQRCKGGSSLWGLIQTEFLSNQFHALVKEMGGALDI 126

Query: 182 LPLSLLKITTDTREQVELLRKQAKRAELFVEPREIQRREELLLVMAIYNDRNNKNKCVID 361
           LPL+LL ++TDTREQVELL KQAKR +L V+P+E+QRREELL +MA  N +N++NK  +D
Sbjct: 127 LPLNLLNLSTDTREQVELLHKQAKRVDLLVDPQELQRREELLQIMASNNQKNSRNKGFVD 186

Query: 362 FDKMKEILTSIGVRSPLEFEKEISKLEAEVDKQAGTGGLIVVSNINNLMSL 514
           F K+KE+ + IG+RSPL++E+EISKLEAE +KQAGTGGLIVVSNINNL+SL
Sbjct: 187 FVKVKEVFSCIGLRSPLDYEEEISKLEAEAEKQAGTGGLIVVSNINNLISL 237


>ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|222865237|gb|EEF02368.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  239 bits (610), Expect = 2e-61
 Identities = 120/171 (70%), Positives = 145/171 (84%)
 Frame = +2

Query: 2   SSLPPSTILCLTELFSVIRRAKFLIERCKEGSSLWNLMQTGLISNQYHVAVKEMGNALDI 181
           S LPPS+ILCLTELFSVI+R K LI+ CK+GSSLW L+QT  +SNQ+HV VKEMG ALDI
Sbjct: 67  SPLPPSSILCLTELFSVIQRVKLLIQGCKDGSSLWGLIQTQFLSNQFHVLVKEMGGALDI 126

Query: 182 LPLSLLKITTDTREQVELLRKQAKRAELFVEPREIQRREELLLVMAIYNDRNNKNKCVID 361
           LPLSLL ++ DTREQVELL +QAKR +L V+PRE+QRREELL +M   N +N+ NK   D
Sbjct: 127 LPLSLLNLSADTREQVELLHRQAKRFDLLVDPRELQRREELLQIMTRNNQKNSGNKGFDD 186

Query: 362 FDKMKEILTSIGVRSPLEFEKEISKLEAEVDKQAGTGGLIVVSNINNLMSL 514
           F K+KE+L+ IG+RSPLE+E+EISKLEAE +KQAGTGGLIVVSNINN++SL
Sbjct: 187 FVKLKEVLSCIGLRSPLEYEEEISKLEAEAEKQAGTGGLIVVSNINNIISL 237


>ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532277|gb|EEF34080.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 695

 Score =  230 bits (587), Expect = 8e-59
 Identities = 115/169 (68%), Positives = 142/169 (84%)
 Frame = +2

Query: 8   LPPSTILCLTELFSVIRRAKFLIERCKEGSSLWNLMQTGLISNQYHVAVKEMGNALDILP 187
           LPPS+ILCLTEL SVI+R KFLI+ CK+GS LW+L+QT L+SNQ++V VKEMG ALDILP
Sbjct: 74  LPPSSILCLTELLSVIKRVKFLIQGCKDGSCLWSLVQTELVSNQFYVLVKEMGRALDILP 133

Query: 188 LSLLKITTDTREQVELLRKQAKRAELFVEPREIQRREELLLVMAIYNDRNNKNKCVIDFD 367
           LSLL +T DTREQVELL KQAKR +L ++P+E+QRREELL +MA  N + +KNK  ID D
Sbjct: 134 LSLLNLTADTREQVELLHKQAKRVDLLIDPKELQRREELLQIMAWNNGKISKNKGFIDTD 193

Query: 368 KMKEILTSIGVRSPLEFEKEISKLEAEVDKQAGTGGLIVVSNINNLMSL 514
           K+KE+ +SIG+RS L++++EI KL  E  KQAGTGGLIVVSNINNLMS+
Sbjct: 194 KVKEVFSSIGLRSSLDYDEEILKLGVEAQKQAGTGGLIVVSNINNLMSV 242


Top