BLASTX nr result

ID: Panax21_contig00013049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013049
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isofor...   479   e-133
ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [...   475   e-131
ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
ref|XP_002893638.1| coatomer protein epsilon subunit family prot...   452   e-125
ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thalian...   452   e-124

>ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isoform 1 [Vitis vinifera]
           gi|297740898|emb|CBI31080.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  479 bits (1232), Expect = e-133
 Identities = 239/289 (82%), Positives = 263/289 (91%)
 Frame = +1

Query: 85  MAAPDLLFSVRNNFFLGAYQXXXXXXXXXXLSPEDAVERDSLLYRSYIAQGSYELVISEI 264
           MAAPDLLF +RNNFFLGA+Q          LSPED++ERD L++RSYIA GSY+LVI+EI
Sbjct: 1   MAAPDLLFGLRNNFFLGAFQAAINNSDIPNLSPEDSIERDCLVHRSYIALGSYQLVINEI 60

Query: 265 DSSAATPLQAVKLLALYLSNPDNKETTISSLQEWLSDPAIGNNPILRTIAGIIFMHEQDY 444
           DSSAATPLQAVKLLALYLS+P+NKE+TISSL+E L DPAIGNNPILR IAGI+FMHEQDY
Sbjct: 61  DSSAATPLQAVKLLALYLSSPENKESTISSLKELLGDPAIGNNPILRLIAGIVFMHEQDY 120

Query: 445 NEALKHTNAGGTMELHALNVQIFLKIHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAV 624
           NEALKHT+ GGTMELHALNVQIFLK+HRSDYAEKQL++MQQ+DEDHTLTQLANAW+NLAV
Sbjct: 121 NEALKHTHPGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQLANAWLNLAV 180

Query: 625 GGSKIQEAYLIFQDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETL 804
           GGSKIQEAYLIFQDFSEKYQMT LILNGKAVC MHMG+FDEAESLLLEALNKD KDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALNKDAKDPETL 240

Query: 805 ANMVVCCLHLGKASSRYLSQLKLSQPEHMLVKRVSAGEEAFDRAVQTVA 951
           AN+VVC LHLGK SSRYLSQLKLS P+H+LV R SA EEAFDRAVQT+A
Sbjct: 241 ANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 289


>ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [Cucumis sativus]
           gi|449490635|ref|XP_004158662.1| PREDICTED: coatomer
           subunit epsilon-1-like [Cucumis sativus]
          Length = 289

 Score =  475 bits (1222), Expect = e-131
 Identities = 236/289 (81%), Positives = 261/289 (90%)
 Frame = +1

Query: 85  MAAPDLLFSVRNNFFLGAYQXXXXXXXXXXLSPEDAVERDSLLYRSYIAQGSYELVISEI 264
           MAAPD LF++RNNF+LGAYQ          LSP+D +ERDS+++RSYIA GSY+L ISEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60

Query: 265 DSSAATPLQAVKLLALYLSNPDNKETTISSLQEWLSDPAIGNNPILRTIAGIIFMHEQDY 444
           DSSA TPLQAVKLLALYLS+P +KE+TI+SLQEWLSDPAIGNN  LR IAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120

Query: 445 NEALKHTNAGGTMELHALNVQIFLKIHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAV 624
           NEALKHTNAGGTMELHALNVQIFLK+HRSDYAE+QLRVMQQIDEDHTLTQLANAW+NLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 625 GGSKIQEAYLIFQDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETL 804
           GGSKIQEAYLIFQDFSEKY MTSLILNG+AVC MHMGNFDEAE+LLLEALNKD KDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 805 ANMVVCCLHLGKASSRYLSQLKLSQPEHMLVKRVSAGEEAFDRAVQTVA 951
           AN+VVC LHLGK +SR+LSQLK+S P+HMLVKR+S  EE FDRAVQ+VA
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 289


>ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|222860138|gb|EEE97685.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  465 bits (1197), Expect = e-128
 Identities = 232/287 (80%), Positives = 258/287 (89%)
 Frame = +1

Query: 91  APDLLFSVRNNFFLGAYQXXXXXXXXXXLSPEDAVERDSLLYRSYIAQGSYELVISEIDS 270
           APD LF++RNNF+LGAYQ          LSP+DAVERDSL+YRSYIA  SY+LVI EID 
Sbjct: 4   APDHLFNLRNNFYLGAYQAAINTSDLPNLSPDDAVERDSLVYRSYIALASYQLVIHEIDD 63

Query: 271 SAATPLQAVKLLALYLSNPDNKETTISSLQEWLSDPAIGNNPILRTIAGIIFMHEQDYNE 450
           +AATPLQAVKLLALYLS+P+NKE+TISSL+EWL+D AI NN ILR IAGIIFMHE+DYNE
Sbjct: 64  AAATPLQAVKLLALYLSSPENKESTISSLKEWLADSAIANNAILRLIAGIIFMHEEDYNE 123

Query: 451 ALKHTNAGGTMELHALNVQIFLKIHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAVGG 630
           ALKHTNAGGTMELHALNVQIFLK+HRSDYAEKQLR+MQQIDEDHTLTQLA AW+NLAVGG
Sbjct: 124 ALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLAVGG 183

Query: 631 SKIQEAYLIFQDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETLAN 810
           SKIQEAYLIFQDFSEKY MT LILNGKAVC MHMGNFDEAE+LLLEALNKD KDPETLAN
Sbjct: 184 SKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAETLLLEALNKDAKDPETLAN 243

Query: 811 MVVCCLHLGKASSRYLSQLKLSQPEHMLVKRVSAGEEAFDRAVQTVA 951
           +VVC LH+GK+SSRYLSQLKLS P+H+LVKR S+ E+ F+RAVQ+VA
Sbjct: 244 LVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSVA 290


>ref|XP_002893638.1| coatomer protein epsilon subunit family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339480|gb|EFH69897.1| coatomer
           protein epsilon subunit family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 292

 Score =  452 bits (1164), Expect = e-125
 Identities = 222/290 (76%), Positives = 260/290 (89%)
 Frame = +1

Query: 82  SMAAPDLLFSVRNNFFLGAYQXXXXXXXXXXLSPEDAVERDSLLYRSYIAQGSYELVISE 261
           SMA PD LF++RN+F+LGAYQ          LS ED VERD L++R+YIA GSY+LVISE
Sbjct: 3   SMAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISE 62

Query: 262 IDSSAATPLQAVKLLALYLSNPDNKETTISSLQEWLSDPAIGNNPILRTIAGIIFMHEQD 441
           ID +AATPLQAVKLLA+YL++P NKE+TISSL+EWL+DP +GNN I+R IAG IFMHE+D
Sbjct: 63  IDEAAATPLQAVKLLAMYLASPGNKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEED 122

Query: 442 YNEALKHTNAGGTMELHALNVQIFLKIHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLA 621
           YNEALKHT++GGTM+LHALNVQIF+K+HRSDYAEKQLRVMQQIDEDHTLTQLA+AW+NLA
Sbjct: 123 YNEALKHTHSGGTMDLHALNVQIFIKMHRSDYAEKQLRVMQQIDEDHTLTQLASAWLNLA 182

Query: 622 VGGSKIQEAYLIFQDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPET 801
           VGGSKIQEAYLIFQDFSEKY MTSLILNGKAVC MHMGNF+EAE+LLLEALNKD KDPET
Sbjct: 183 VGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPET 242

Query: 802 LANMVVCCLHLGKASSRYLSQLKLSQPEHMLVKRVSAGEEAFDRAVQTVA 951
           LAN+VVC LH+GK+SSRYL+QLKLS PEH+LVKRV++ E+ F+RA+Q+ A
Sbjct: 243 LANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRVASAEDNFERALQSFA 292


>ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thaliana]
           gi|75336896|sp|Q9SA78.1|COPE1_ARATH RecName:
           Full=Coatomer subunit epsilon-1; AltName:
           Full=Epsilon-coat protein 1; Short=Epsilon-COP 1
           gi|4587519|gb|AAD25750.1|AC007060_8 Strong similarity to
           F19I3.7 gi|3033380 putative coatomer epsilon subunit
           from Arabidopsis thaliana BAC gb|AC004238. ESTs
           gb|Z17908, gb|AA728673, gb|N96555, gb|H76335,
           gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119
           and AI100483 come from this gene [Arabidopsis thaliana]
           gi|13194794|gb|AAK15559.1|AF348588_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|13878125|gb|AAK44140.1|AF370325_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|17104797|gb|AAL34287.1| putative coatomer protein,
           epsilon subunit [Arabidopsis thaliana]
           gi|332193133|gb|AEE31254.1| coatomer subunit epsilon-1
           [Arabidopsis thaliana]
          Length = 292

 Score =  452 bits (1162), Expect = e-124
 Identities = 221/290 (76%), Positives = 260/290 (89%)
 Frame = +1

Query: 82  SMAAPDLLFSVRNNFFLGAYQXXXXXXXXXXLSPEDAVERDSLLYRSYIAQGSYELVISE 261
           SMA PD LF++RN+F+LGAYQ          LS ED VERD L++R+YIA GSY+LVISE
Sbjct: 3   SMAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISE 62

Query: 262 IDSSAATPLQAVKLLALYLSNPDNKETTISSLQEWLSDPAIGNNPILRTIAGIIFMHEQD 441
           ID +AATPLQAVKLLA+YLS+P+NKE+TISSL+EWL+DP +GNN I+R IAG IFMHE+D
Sbjct: 63  IDEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEED 122

Query: 442 YNEALKHTNAGGTMELHALNVQIFLKIHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLA 621
           YNEALKHT++GGTM+LHALNVQIF+K+HRSD+AEKQLRVMQQIDEDHTLTQLA+AW+NLA
Sbjct: 123 YNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLA 182

Query: 622 VGGSKIQEAYLIFQDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPET 801
           VGGSKIQEAYLIFQDFSEKY MTSLILNGKAVC MHMGNF+EAE+LLLEALNKD KDPET
Sbjct: 183 VGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPET 242

Query: 802 LANMVVCCLHLGKASSRYLSQLKLSQPEHMLVKRVSAGEEAFDRAVQTVA 951
           LAN+VVC LH+GK+SSRYL+QLKLS PEH+LVKR ++ E+ F+RA+Q+ A
Sbjct: 243 LANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292


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