BLASTX nr result

ID: Panax21_contig00013048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013048
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isofor...   283   3e-74
ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [...   280   2e-73
ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|2...   277   3e-72
ref|XP_002893638.1| coatomer protein epsilon subunit family prot...   270   3e-70
ref|NP_001236915.1| epsilon1-COP [Glycine max] gi|7670062|dbj|BA...   268   1e-69

>ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isoform 1 [Vitis vinifera]
           gi|297740898|emb|CBI31080.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  283 bits (725), Expect = 3e-74
 Identities = 140/157 (89%), Positives = 148/157 (94%)
 Frame = +2

Query: 2   MELHALNVQIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAVGGSKIQEAYLIF 181
           MELHALNVQIFLKMHRSDYAEKQL++MQQ+DEDHTLTQLANAW+NLAVGGSKIQEAYLIF
Sbjct: 133 MELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQLANAWLNLAVGGSKIQEAYLIF 192

Query: 182 QDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETLANMVVCCLHLGK 361
           QDFSEKYQMT LILNGKAVC MHMG+FDEAESLLLEALNKD KDPETLAN+VVC LHLGK
Sbjct: 193 QDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALNKDAKDPETLANLVVCSLHLGK 252

Query: 362 ASSRYLSQLKLSQPDHMLVKRVSAGEEAFDRAVQTVA 472
            SSRYLSQLKLS PDH+LV R SA EEAFDRAVQT+A
Sbjct: 253 QSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 289


>ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [Cucumis sativus]
           gi|449490635|ref|XP_004158662.1| PREDICTED: coatomer
           subunit epsilon-1-like [Cucumis sativus]
          Length = 289

 Score =  280 bits (717), Expect = 2e-73
 Identities = 138/157 (87%), Positives = 148/157 (94%)
 Frame = +2

Query: 2   MELHALNVQIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAVGGSKIQEAYLIF 181
           MELHALNVQIFLKMHRSDYAE+QLRVMQQIDEDHTLTQLANAW+NLAVGGSKIQEAYLIF
Sbjct: 133 MELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIF 192

Query: 182 QDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETLANMVVCCLHLGK 361
           QDFSEKY MTSLILNG+AVC MHMGNFDEAE+LLLEALNKD KDPETLAN+VVC LHLGK
Sbjct: 193 QDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHLGK 252

Query: 362 ASSRYLSQLKLSQPDHMLVKRVSAGEEAFDRAVQTVA 472
            +SR+LSQLK+S PDHMLVKR+S  EE FDRAVQ+VA
Sbjct: 253 PTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 289


>ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|222860138|gb|EEE97685.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  277 bits (708), Expect = 3e-72
 Identities = 136/157 (86%), Positives = 147/157 (93%)
 Frame = +2

Query: 2   MELHALNVQIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAVGGSKIQEAYLIF 181
           MELHALNVQIFLKMHRSDYAEKQLR+MQQIDEDHTLTQLA AW+NLAVGGSKIQEAYLIF
Sbjct: 134 MELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLAVGGSKIQEAYLIF 193

Query: 182 QDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETLANMVVCCLHLGK 361
           QDFSEKY MT LILNGKAVC MHMGNFDEAE+LLLEALNKD KDPETLAN+VVC LH+GK
Sbjct: 194 QDFSEKYPMTGLILNGKAVCCMHMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHIGK 253

Query: 362 ASSRYLSQLKLSQPDHMLVKRVSAGEEAFDRAVQTVA 472
           +SSRYLSQLKLS PDH+LVKR S+ E+ F+RAVQ+VA
Sbjct: 254 SSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSVA 290


>ref|XP_002893638.1| coatomer protein epsilon subunit family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339480|gb|EFH69897.1| coatomer
           protein epsilon subunit family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 292

 Score =  270 bits (690), Expect = 3e-70
 Identities = 131/157 (83%), Positives = 149/157 (94%)
 Frame = +2

Query: 2   MELHALNVQIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAVGGSKIQEAYLIF 181
           M+LHALNVQIF+KMHRSDYAEKQLRVMQQIDEDHTLTQLA+AW+NLAVGGSKIQEAYLIF
Sbjct: 136 MDLHALNVQIFIKMHRSDYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIF 195

Query: 182 QDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETLANMVVCCLHLGK 361
           QDFSEKY MTSLILNGKAVC MHMGNF+EAE+LLLEALNKD KDPETLAN+VVC LH+GK
Sbjct: 196 QDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANLVVCSLHVGK 255

Query: 362 ASSRYLSQLKLSQPDHMLVKRVSAGEEAFDRAVQTVA 472
           +SSRYL+QLKLS P+H+LVKRV++ E+ F+RA+Q+ A
Sbjct: 256 SSSRYLNQLKLSHPEHVLVKRVASAEDNFERALQSFA 292


>ref|NP_001236915.1| epsilon1-COP [Glycine max] gi|7670062|dbj|BAA94964.1| epsilon1-COP
           [Glycine max]
          Length = 290

 Score =  268 bits (685), Expect = 1e-69
 Identities = 127/155 (81%), Positives = 146/155 (94%)
 Frame = +2

Query: 2   MELHALNVQIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLANAWINLAVGGSKIQEAYLIF 181
           MELHALN+QIF+KMHRSDYAE+QLR+MQQIDEDHTLTQLANAW+NLAVGGSKIQEAYLIF
Sbjct: 133 MELHALNIQIFIKMHRSDYAERQLRIMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIF 192

Query: 182 QDFSEKYQMTSLILNGKAVCSMHMGNFDEAESLLLEALNKDTKDPETLANMVVCCLHLGK 361
           QD SE+YQ TSL+LNGKAVC MHMGNFDEAE+LL+EALNKD +DPETLAN+VVCCLHLGK
Sbjct: 193 QDLSERYQSTSLLLNGKAVCCMHMGNFDEAETLLVEALNKDARDPETLANLVVCCLHLGK 252

Query: 362 ASSRYLSQLKLSQPDHMLVKRVSAGEEAFDRAVQT 466
            S++  SQLKLS P+H+LVKRVS+ EE+FDRA+Q+
Sbjct: 253 PSNKSFSQLKLSHPEHVLVKRVSSAEESFDRALQS 287


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