BLASTX nr result

ID: Panax21_contig00013043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013043
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...   127   9e-28
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...   127   9e-28
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu...   127   9e-28
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               61   5e-19
ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabac...    78   8e-13

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score =  127 bits (319), Expect = 9e-28
 Identities = 71/103 (68%), Positives = 74/103 (71%)
 Frame = +1

Query: 4   GLSPRSARWPIGIAAFGLCLPFIIKNSGSARESAGNNRKEGVHVAAAPAPPLSQWGSRFG 183
           G SPRSA  PIGIAAFGLCLPFIIKNSGSARESAGNNRKEGVHVAA  AP L     +  
Sbjct: 61  GPSPRSAL-PIGIAAFGLCLPFIIKNSGSARESAGNNRKEGVHVAAVSAPFLVNGAQQVR 119

Query: 184 IYYKRENPLQRTTPLLGQRVEWPRADLFGYIIQVESRVTGTAV 312
              ++            QRVEWPRADLFGYIIQVESRVTG AV
Sbjct: 120 HLLQKRESTSDNHVSARQRVEWPRADLFGYIIQVESRVTGKAV 162


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 [Beta vulgaris subsp. vulgaris]
          Length = 515

 Score =  127 bits (319), Expect = 9e-28
 Identities = 84/169 (49%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
 Frame = +1

Query: 4   GLSPRSARWPIGIAAFGLCLPFIIKNSGSARESAGNNRKEGVHVAAAPAPPLSQWGSRFG 183
           G SPRSARWPIGIAAFGLCL F+IKNSGSARESAGNNRKEGVHVAAA AP L    +   
Sbjct: 55  GPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSA 114

Query: 184 IYYKRENPLQRTTPLLGQRVEWPRADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXXVE 363
              K     + T            +DLFGYIIQVES VTGTA                V+
Sbjct: 115 TTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA------GLMENNFHGSVQ 168

Query: 364 NSSFPFV*IPQ------RRIKNLWALSIPSLEPRIKPPPPLGFHISFDS 492
            + F    +         RI+N W  SIPS  P  K P P G +I FDS
Sbjct: 169 RALFSLRILRSLRVNSLARIQNFWGPSIPSSSP-AKTPLPFGLNIFFDS 216


>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 464

 Score =  127 bits (319), Expect = 9e-28
 Identities = 84/169 (49%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
 Frame = +1

Query: 4   GLSPRSARWPIGIAAFGLCLPFIIKNSGSARESAGNNRKEGVHVAAAPAPPLSQWGSRFG 183
           G SPRSARWPIGIAAFGLCL F+IKNSGSARESAGNNRKEGVHVAAA AP L    +   
Sbjct: 4   GPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSA 63

Query: 184 IYYKRENPLQRTTPLLGQRVEWPRADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXXVE 363
              K     + T            +DLFGYIIQVES VTGTA                V+
Sbjct: 64  TTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA------GLMENNFHGSVQ 117

Query: 364 NSSFPFV*IPQ------RRIKNLWALSIPSLEPRIKPPPPLGFHISFDS 492
            + F    +         RI+N W  SIPS  P  K P P G +I FDS
Sbjct: 118 RALFSLRILRSLRVNSLARIQNFWGPSIPSSSP-AKTPLPFGLNIFFDS 165


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 61.2 bits (147), Expect(2) = 5e-19
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 48  LRALPALYNKEFRLGPGKRWQQQKGRG 128
           LRALPALYNKEFRLGPGKRWQQQKGRG
Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRG 208



 Score = 57.8 bits (138), Expect(2) = 5e-19
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +1

Query: 151 PPLSQWGSRFGIYYKRENPLQRTTPLLG 234
           P LSQWGSRFGIYYKRENPLQ TTPLLG
Sbjct: 216 PLLSQWGSRFGIYYKRENPLQITTPLLG 243


>ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabacum]
           gi|56806589|dbj|BAD83490.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 105

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/43 (88%), Positives = 38/43 (88%)
 Frame = -2

Query: 132 MDPFLSVVASAFPGRAGILYYKGQAKPEGCYPNRPAGGTRREP 4
           MDPFLSVVASAFPGRAGI YYKGQAKPEG YPNR  GGTRR P
Sbjct: 1   MDPFLSVVASAFPGRAGIFYYKGQAKPEGSYPNR-KGGTRRGP 42


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