BLASTX nr result
ID: Panax21_contig00013039
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00013039 (706 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|2... 108 7e-42 ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu... 104 9e-42 emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera] 108 4e-40 emb|CBI16556.3| unnamed protein product [Vitis vinifera] 108 4e-40 ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi... 108 4e-40 >ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|222844876|gb|EEE82423.1| predicted protein [Populus trichocarpa] Length = 620 Score = 108 bits (269), Expect(2) = 7e-42 Identities = 51/74 (68%), Positives = 64/74 (86%) Frame = -2 Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166 GT + VEKIF EII HI+ELMTDPFGNYLVQKLLEVCN+DQ+MQIL +ITRK G+LVRIS Sbjct: 319 GTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGELVRIS 378 Query: 165 CEMNGLELSRRLLK 124 C+M+G +++++ Sbjct: 379 CDMHGTRAVQKVIE 392 Score = 89.0 bits (219), Expect(2) = 7e-42 Identities = 43/48 (89%), Positives = 47/48 (97%) Frame = -1 Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8 TRAVQKVIETLKTPEQFS++VSALKP IVT+IK+MNGNHVAQRCLQYL Sbjct: 384 TRAVQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYL 431 >ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis] gi|223537356|gb|EEF38985.1| RNA binding protein, putative [Ricinus communis] Length = 771 Score = 104 bits (260), Expect(2) = 9e-42 Identities = 49/74 (66%), Positives = 63/74 (85%) Frame = -2 Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166 GT + +EKIF E+I HI ELMTDPFGNYLVQKLLEVCN+DQ+MQIL +ITRK G+LVRIS Sbjct: 447 GTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNEDQRMQILCAITRKAGELVRIS 506 Query: 165 CEMNGLELSRRLLK 124 C+M+G +++++ Sbjct: 507 CDMHGTRAVQKVIE 520 Score = 92.0 bits (227), Expect(2) = 9e-42 Identities = 43/49 (87%), Positives = 49/49 (100%) Frame = -1 Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYLT 5 TRAVQKVIETLKTP+QFS++VS+LKPGIVT+IK+MNGNHVAQRCLQYLT Sbjct: 512 TRAVQKVIETLKTPQQFSMVVSSLKPGIVTLIKNMNGNHVAQRCLQYLT 560 >emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera] Length = 1051 Score = 108 bits (270), Expect(2) = 4e-40 Identities = 51/74 (68%), Positives = 63/74 (85%) Frame = -2 Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166 G+ E V+KIF EII HI+ELMTDPFGNYLVQKLLEVC +DQQMQILH+ITR+ GDLVRIS Sbjct: 460 GSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRIS 519 Query: 165 CEMNGLELSRRLLK 124 C M+G +++++ Sbjct: 520 CNMHGTRAVQKVIE 533 Score = 82.8 bits (203), Expect(2) = 4e-40 Identities = 41/48 (85%), Positives = 45/48 (93%) Frame = -1 Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8 TRAVQKVIETL+T EQFS+IVS+LKPGIVT+IKDMNGNHVAQ CLQ L Sbjct: 525 TRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNL 572 >emb|CBI16556.3| unnamed protein product [Vitis vinifera] Length = 722 Score = 108 bits (270), Expect(2) = 4e-40 Identities = 51/74 (68%), Positives = 63/74 (85%) Frame = -2 Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166 G+ E V+KIF EII HI+ELMTDPFGNYLVQKLLEVC +DQQMQILH+ITR+ GDLVRIS Sbjct: 430 GSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRIS 489 Query: 165 CEMNGLELSRRLLK 124 C M+G +++++ Sbjct: 490 CNMHGTRAVQKVIE 503 Score = 82.8 bits (203), Expect(2) = 4e-40 Identities = 41/48 (85%), Positives = 45/48 (93%) Frame = -1 Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8 TRAVQKVIETL+T EQFS+IVS+LKPGIVT+IKDMNGNHVAQ CLQ L Sbjct: 495 TRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNL 542 >ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera] Length = 711 Score = 108 bits (270), Expect(2) = 4e-40 Identities = 51/74 (68%), Positives = 63/74 (85%) Frame = -2 Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166 G+ E V+KIF EII HI+ELMTDPFGNYLVQKLLEVC +DQQMQILH+ITR+ GDLVRIS Sbjct: 419 GSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRIS 478 Query: 165 CEMNGLELSRRLLK 124 C M+G +++++ Sbjct: 479 CNMHGTRAVQKVIE 492 Score = 82.8 bits (203), Expect(2) = 4e-40 Identities = 41/48 (85%), Positives = 45/48 (93%) Frame = -1 Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8 TRAVQKVIETL+T EQFS+IVS+LKPGIVT+IKDMNGNHVAQ CLQ L Sbjct: 484 TRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNL 531