BLASTX nr result

ID: Panax21_contig00013039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013039
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|2...   108   7e-42
ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...   104   9e-42
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]   108   4e-40
emb|CBI16556.3| unnamed protein product [Vitis vinifera]              108   4e-40
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi...   108   4e-40

>ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|222844876|gb|EEE82423.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  108 bits (269), Expect(2) = 7e-42
 Identities = 51/74 (68%), Positives = 64/74 (86%)
 Frame = -2

Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166
           GT + VEKIF EII HI+ELMTDPFGNYLVQKLLEVCN+DQ+MQIL +ITRK G+LVRIS
Sbjct: 319 GTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGELVRIS 378

Query: 165 CEMNGLELSRRLLK 124
           C+M+G    +++++
Sbjct: 379 CDMHGTRAVQKVIE 392



 Score = 89.0 bits (219), Expect(2) = 7e-42
 Identities = 43/48 (89%), Positives = 47/48 (97%)
 Frame = -1

Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8
           TRAVQKVIETLKTPEQFS++VSALKP IVT+IK+MNGNHVAQRCLQYL
Sbjct: 384 TRAVQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYL 431


>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score =  104 bits (260), Expect(2) = 9e-42
 Identities = 49/74 (66%), Positives = 63/74 (85%)
 Frame = -2

Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166
           GT + +EKIF E+I HI ELMTDPFGNYLVQKLLEVCN+DQ+MQIL +ITRK G+LVRIS
Sbjct: 447 GTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNEDQRMQILCAITRKAGELVRIS 506

Query: 165 CEMNGLELSRRLLK 124
           C+M+G    +++++
Sbjct: 507 CDMHGTRAVQKVIE 520



 Score = 92.0 bits (227), Expect(2) = 9e-42
 Identities = 43/49 (87%), Positives = 49/49 (100%)
 Frame = -1

Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYLT 5
           TRAVQKVIETLKTP+QFS++VS+LKPGIVT+IK+MNGNHVAQRCLQYLT
Sbjct: 512 TRAVQKVIETLKTPQQFSMVVSSLKPGIVTLIKNMNGNHVAQRCLQYLT 560


>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
          Length = 1051

 Score =  108 bits (270), Expect(2) = 4e-40
 Identities = 51/74 (68%), Positives = 63/74 (85%)
 Frame = -2

Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166
           G+ E V+KIF EII HI+ELMTDPFGNYLVQKLLEVC +DQQMQILH+ITR+ GDLVRIS
Sbjct: 460 GSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRIS 519

Query: 165 CEMNGLELSRRLLK 124
           C M+G    +++++
Sbjct: 520 CNMHGTRAVQKVIE 533



 Score = 82.8 bits (203), Expect(2) = 4e-40
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -1

Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8
           TRAVQKVIETL+T EQFS+IVS+LKPGIVT+IKDMNGNHVAQ CLQ L
Sbjct: 525 TRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNL 572


>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  108 bits (270), Expect(2) = 4e-40
 Identities = 51/74 (68%), Positives = 63/74 (85%)
 Frame = -2

Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166
           G+ E V+KIF EII HI+ELMTDPFGNYLVQKLLEVC +DQQMQILH+ITR+ GDLVRIS
Sbjct: 430 GSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRIS 489

Query: 165 CEMNGLELSRRLLK 124
           C M+G    +++++
Sbjct: 490 CNMHGTRAVQKVIE 503



 Score = 82.8 bits (203), Expect(2) = 4e-40
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -1

Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8
           TRAVQKVIETL+T EQFS+IVS+LKPGIVT+IKDMNGNHVAQ CLQ L
Sbjct: 495 TRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNL 542


>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
          Length = 711

 Score =  108 bits (270), Expect(2) = 4e-40
 Identities = 51/74 (68%), Positives = 63/74 (85%)
 Frame = -2

Query: 345 GTQEYVEKIFHEIIVHIIELMTDPFGNYLVQKLLEVCNQDQQMQILHSITRKVGDLVRIS 166
           G+ E V+KIF EII HI+ELMTDPFGNYLVQKLLEVC +DQQMQILH+ITR+ GDLVRIS
Sbjct: 419 GSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRIS 478

Query: 165 CEMNGLELSRRLLK 124
           C M+G    +++++
Sbjct: 479 CNMHGTRAVQKVIE 492



 Score = 82.8 bits (203), Expect(2) = 4e-40
 Identities = 41/48 (85%), Positives = 45/48 (93%)
 Frame = -1

Query: 151 TRAVQKVIETLKTPEQFSIIVSALKPGIVTMIKDMNGNHVAQRCLQYL 8
           TRAVQKVIETL+T EQFS+IVS+LKPGIVT+IKDMNGNHVAQ CLQ L
Sbjct: 484 TRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNL 531


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