BLASTX nr result

ID: Panax21_contig00013030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013030
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 hom...   355   1e-95
gb|AGG19192.1| maternal effect embryo arrest 21, partial [Dimoca...   320   4e-85
ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|2...   314   4e-83
ref|XP_003597391.1| rRNA-processing protein UTP23-like protein [...   312   1e-82
ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ric...   305   1e-80

>ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera]
            gi|296082256|emb|CBI21261.3| unnamed protein product
            [Vitis vinifera]
          Length = 284

 Score =  355 bits (911), Expect = 1e-95
 Identities = 176/264 (66%), Positives = 209/264 (79%), Gaps = 1/264 (0%)
 Frame = -3

Query: 1310 MRLKRQKRHRKIVRFYSACFGFRDPFKVLCDGTFVHHILSHGITPADTALSNVLGAQVKV 1131
            MRLK+QKRHRKIVRFY+ACFGFR PFKVLCDGTFVHH++ + I+P D A+S +LGA VK+
Sbjct: 1    MRLKKQKRHRKIVRFYTACFGFRQPFKVLCDGTFVHHLIVNHISPPDNAVSTILGAPVKL 60

Query: 1130 FTTRCVLAELNSLGEAYSDSLNAARNLVPARCDHEKRKSAVDCITEIIGENNPEHFFVAT 951
             TTRCVLAEL SLG++YS+SL AA  L+ ARCDHE+RKSA  C  EIIGENNPEHFFVAT
Sbjct: 61   MTTRCVLAELKSLGDSYSESLKAAGKLIAARCDHERRKSAEACFVEIIGENNPEHFFVAT 120

Query: 950  QDADMRKKFQEIPGVPLIYGLRNALLLEPPSSFQHQFVKSAEEERLHMTDLELNMLNMKK 771
            QD D+RKKFQEIPGVP+I+GLRNALLLEPPS  Q QFVKS+EEERLHMT+LE  +L+ ++
Sbjct: 121  QDTDLRKKFQEIPGVPVIFGLRNALLLEPPSVSQRQFVKSSEEERLHMTELEHKLLSKRQ 180

Query: 770  TNRLAIKEARDLPDAHEGVGDKIPGTQTMKLSND-RKRTDVKDTVQFKRKKAKGPNPLSC 594
             NRL  KE +D  D +E + D+  G Q     N+ ++R  VKD VQFKR KAKGPNPLSC
Sbjct: 181  KNRLTSKETKDSSDENEALEDQNLGLQAATNENNAKRRMVVKDRVQFKRNKAKGPNPLSC 240

Query: 593  KKKKSYGNQNNVPQKESKDAEQTM 522
            KKKKS    N   +KE KDA +T+
Sbjct: 241  KKKKSQRQPNPASEKEDKDAGKTV 264


>gb|AGG19192.1| maternal effect embryo arrest 21, partial [Dimocarpus longan]
            gi|456722991|gb|AGG38109.1| maternal effect embryo arrest
            21 protein [Dimocarpus longan]
          Length = 285

 Score =  320 bits (821), Expect = 4e-85
 Identities = 162/264 (61%), Positives = 198/264 (75%), Gaps = 1/264 (0%)
 Frame = -3

Query: 1310 MRLKRQKRHRKIVRFYSACFGFRDPFKVLCDGTFVHHILSHGITPADTALSNVLGAQVKV 1131
            MR+K+QKRHRKIVRF +ACFGFR P+KV+ DGTFVHH++++ +TPAD ALS  L A VK+
Sbjct: 1    MRVKKQKRHRKIVRFCTACFGFRQPYKVVLDGTFVHHLIANQVTPADKALSTTLAASVKL 60

Query: 1130 FTTRCVLAELNSLGEAYSDSLNAARNLVPARCDHEKRKSAVDCITEIIGENNPEHFFVAT 951
            FTT+CV+ EL  LGE++S++L+AA  L  ARC+HEK+KSA  CI ++IGE NPEHFFVAT
Sbjct: 61   FTTKCVIDELKRLGESHSEALHAAHELAIARCEHEKKKSADACIMDVIGEKNPEHFFVAT 120

Query: 950  QDADMRKKFQEIPGVPLIYGLRNALLLEPPSSFQHQFVKSAEEERLHMTDLELNMLNMKK 771
            QD D+RKK QE+PGVPL+YGLRN LLLEP S+ Q QFVK +EE R HMT+LE  +L  + 
Sbjct: 121  QDVDLRKKLQEVPGVPLVYGLRNTLLLEPLSASQRQFVKVSEEGRSHMTELEHKILKKRA 180

Query: 770  TNRLAIKEARDLPDAHEGVGDKIPGTQTM-KLSNDRKRTDVKDTVQFKRKKAKGPNPLSC 594
             + L   E RD  +  E VGD+    QT+ K  N RK+  VKD  QFKRKKAKGPNPLSC
Sbjct: 181  KDILETDEMRDSLNEDENVGDQKLEMQTVKKKDNTRKQLGVKDGPQFKRKKAKGPNPLSC 240

Query: 593  KKKKSYGNQNNVPQKESKDAEQTM 522
            KKK S  N N V  KESKD + TM
Sbjct: 241  KKKTSRENPNMVSGKESKDGDNTM 264


>ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|222837748|gb|EEE76113.1|
            predicted protein [Populus trichocarpa]
          Length = 251

 Score =  314 bits (804), Expect = 4e-83
 Identities = 153/251 (60%), Positives = 192/251 (76%)
 Frame = -3

Query: 1310 MRLKRQKRHRKIVRFYSACFGFRDPFKVLCDGTFVHHILSHGITPADTALSNVLGAQVKV 1131
            MR+K+QKRHR+ VRFY+ACFGFR P+KVLCDGTF+HH++ + I PADTA+SN+LG  VK+
Sbjct: 1    MRVKKQKRHRRAVRFYTACFGFRQPYKVLCDGTFIHHLIVNNIAPADTAISNILGGSVKL 60

Query: 1130 FTTRCVLAELNSLGEAYSDSLNAARNLVPARCDHEKRKSAVDCITEIIGENNPEHFFVAT 951
            FTTRCVLAEL  LG++Y++SL AA  L+ ARCDHE+ K+A  CI EIIGENNP+HF+V T
Sbjct: 61   FTTRCVLAELKRLGKSYTESLQAANTLMIARCDHEQNKNAEGCIVEIIGENNPDHFYVGT 120

Query: 950  QDADMRKKFQEIPGVPLIYGLRNALLLEPPSSFQHQFVKSAEEERLHMTDLELNMLNMKK 771
            QD DMRKKFQE+PGVPLI+GLRNAL L+PPS+FQ QF K++EEER HMT+ E+ +L  + 
Sbjct: 121  QDTDMRKKFQEVPGVPLIFGLRNALFLQPPSAFQRQFAKNSEEERSHMTEKEVALLKKRT 180

Query: 770  TNRLAIKEARDLPDAHEGVGDKIPGTQTMKLSNDRKRTDVKDTVQFKRKKAKGPNPLSCK 591
             + +   E  D  D + G  D+    Q  K S+ RK   VKD  QFKR KAKGPNPLS +
Sbjct: 181  KDLVENWEIGDSSDENGGPEDENLEMQPQKYSS-RKGMKVKDRPQFKRNKAKGPNPLSVQ 239

Query: 590  KKKSYGNQNNV 558
            KKKS  N N++
Sbjct: 240  KKKSRQNTNSM 250


>ref|XP_003597391.1| rRNA-processing protein UTP23-like protein [Medicago truncatula]
            gi|87241272|gb|ABD33130.1| Protein of unknown function
            DUF652 [Medicago truncatula] gi|355486439|gb|AES67642.1|
            rRNA-processing protein UTP23-like protein [Medicago
            truncatula]
          Length = 289

 Score =  312 bits (799), Expect = 1e-82
 Identities = 158/262 (60%), Positives = 199/262 (75%), Gaps = 5/262 (1%)
 Frame = -3

Query: 1310 MRLKRQKRHRKIVRFYSACFGFRDPFKVLCDGTFVHHILSHGITPADTALSNVLGAQVKV 1131
            M++K+QKRHRK + FY+ACFGFR P+KVLCDGTFVHH++ + ITPADTAL+N+L A VK+
Sbjct: 5    MKVKKQKRHRKSLTFYTACFGFRKPYKVLCDGTFVHHLVVNRITPADTALANILSATVKL 64

Query: 1130 FTTRCVLAELNSLGEAYSDSLNAARNLVPARCDHEKRKSAVDCITEIIGENNPEHFFVAT 951
            +TTRCVLAEL  LG++YS++L+AA NL+ ARC+H+K   A  CI E++GENN EHFFVA+
Sbjct: 65   YTTRCVLAELKRLGKSYSEALDAANNLIIARCEHDKCARADSCIMEVVGENNSEHFFVAS 124

Query: 950  QDADMRKKFQEIPGVPLIYGLRNALLLEPPSSFQHQFVKSAEEERLHMTDLELNMLNMKK 771
            QD D+RKK +E+PGVPLI+GLRNAL LE PS+FQ ++VK++EE RLHMTD E  +   + 
Sbjct: 125  QDTDLRKKLEEVPGVPLIFGLRNALFLESPSAFQKEYVKTSEERRLHMTDKEYQIFKDRA 184

Query: 770  TNRLAIKEARDLPDA----HEGVGDKIPGTQTMKLS-NDRKRTDVKDTVQFKRKKAKGPN 606
              RLA  EA D  +A    +  +GD I   Q +K S   R    VKD  QFKR+KAKGPN
Sbjct: 185  MKRLADGEA-DNSNAEIVENNDLGDSIASAQAIKRSIISRNHNGVKDKPQFKRRKAKGPN 243

Query: 605  PLSCKKKKSYGNQNNVPQKESK 540
            PLSCKKKKS  NQNN P KE+K
Sbjct: 244  PLSCKKKKSRENQNN-PTKETK 264


>ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ricinus communis]
            gi|223530289|gb|EEF32186.1| rRNA-processing protein
            UTP23, putative [Ricinus communis]
          Length = 290

 Score =  305 bits (782), Expect = 1e-80
 Identities = 153/248 (61%), Positives = 190/248 (76%), Gaps = 1/248 (0%)
 Frame = -3

Query: 1310 MRLKRQKRHRKIVRFYSACFGFRDPFKVLCDGTFVHHILSHGITPADTALSNVLGAQVKV 1131
            MR+++QKRHR+ VRFY  C+GFR P+K+LCDGTFVHH++ + I PAD AL+N+LG  VK+
Sbjct: 1    MRVRKQKRHRRAVRFYVTCYGFRQPYKILCDGTFVHHLIVNRIAPADEALANILGGPVKL 60

Query: 1130 FTTRCVLAELNSLGEAYSDSLNAARNLVPARCDHEKRKSAVDCITEIIGENNPEHFFVAT 951
            FTTRCV AEL  LG++YS+SL AA  L+ ARCDHEK KSA  CI E+IG+NNPEHFFVAT
Sbjct: 61   FTTRCVHAELKRLGKSYSESLQAAHLLMTARCDHEKVKSAEACILEVIGQNNPEHFFVAT 120

Query: 950  QDADMRKKFQEIPGVPLIYGLRNALLLEPPSSFQHQFVKSAEEERLHMTDLELNMLNMKK 771
            QD D+RKKF+E+P VPLI+GLRN+L LEPPS+FQH FVK++EEERLH T+LE  ML  K 
Sbjct: 121  QDFDLRKKFREVPAVPLIFGLRNSLHLEPPSAFQHAFVKASEEERLHATELEQKML--KT 178

Query: 770  TNRLAIKEARDLPDAHEGVGDKIPGTQTM-KLSNDRKRTDVKDTVQFKRKKAKGPNPLSC 594
            T +  +    ++    EG  D+    Q + K  + R +TDVKD  QFKRK+AKGPNPLSC
Sbjct: 179  TTKSILGHEGEI----EGPKDQNLEMQPVEKKHSARNKTDVKDRPQFKRKRAKGPNPLSC 234

Query: 593  KKKKSYGN 570
            KKKK  GN
Sbjct: 235  KKKKKDGN 242


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