BLASTX nr result
ID: Panax21_contig00013027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00013027 (630 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis ... 370 e-101 ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase... 368 e-100 ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi... 355 5e-96 emb|CBI29799.3| unnamed protein product [Vitis vinifera] 354 6e-96 ref|XP_002308925.1| chromatin remodeling complex subunit [Populu... 350 1e-94 >ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis sativus] Length = 1501 Score = 370 bits (951), Expect = e-101 Identities = 186/209 (88%), Positives = 198/209 (94%) Frame = -3 Query: 628 MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449 MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA Sbjct: 1224 MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 1283 Query: 448 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQK+TVQQLV Sbjct: 1284 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLV 1343 Query: 268 MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYL 89 MTGGHVQGD+LAPEDVVSLL+DDAQLEQKL EIP++++DRQKKK KGIR+DAEGDA L Sbjct: 1344 MTGGHVQGDILAPEDVVSLLLDDAQLEQKLREIPIVAKDRQKKKQ-AKGIRVDAEGDASL 1402 Query: 88 EDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2 EDLTNP+S+V PSPDPEK K+N+KKR Sbjct: 1403 EDLTNPESRVTEYDPSPDPEKTKANSKKR 1431 >ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase INO80-like [Cucumis sativus] Length = 711 Score = 368 bits (944), Expect = e-100 Identities = 185/209 (88%), Positives = 197/209 (94%) Frame = -3 Query: 628 MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449 MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQ RNDIFVFLLSTRAGGLGINLTAA Sbjct: 434 MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAA 493 Query: 448 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQK+TVQQLV Sbjct: 494 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLV 553 Query: 268 MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYL 89 MTGGHVQGD+LAPEDVVSLL+DDAQLEQKL EIP++++DRQKKK KGIR+DAEGDA L Sbjct: 554 MTGGHVQGDILAPEDVVSLLLDDAQLEQKLREIPIVAKDRQKKKQ-AKGIRVDAEGDASL 612 Query: 88 EDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2 EDLTNP+S+V PSPDPEK K+N+KKR Sbjct: 613 EDLTNPESRVTEYDPSPDPEKTKANSKKR 641 >ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera] Length = 1563 Score = 355 bits (910), Expect = 5e-96 Identities = 184/213 (86%), Positives = 195/213 (91%), Gaps = 4/213 (1%) Frame = -3 Query: 628 MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449 MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQLR+DIFVFLLSTRAGGLGINLTAA Sbjct: 1241 MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLSTRAGGLGINLTAA 1300 Query: 448 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV Sbjct: 1301 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 1360 Query: 268 MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPL----LSRDRQKKKSGTKGIRIDAEG 101 MTGGHVQGDLLAPEDVVSLL+DDAQLEQKL ++PL S+D+QKKK GTKGI +DAEG Sbjct: 1361 MTGGHVQGDLLAPEDVVSLLLDDAQLEQKLRDLPLQVRFKSKDKQKKKRGTKGILLDAEG 1420 Query: 100 DAYLEDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2 DA LED N SQ NG +PSPD E+ KS++KKR Sbjct: 1421 DATLEDFPN-ISQGNGQEPSPDAERPKSSSKKR 1452 >emb|CBI29799.3| unnamed protein product [Vitis vinifera] Length = 1557 Score = 354 bits (909), Expect = 6e-96 Identities = 183/209 (87%), Positives = 194/209 (92%) Frame = -3 Query: 628 MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449 MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQLR+DIFVFLLSTRAGGLGINLTAA Sbjct: 1241 MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLSTRAGGLGINLTAA 1300 Query: 448 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV Sbjct: 1301 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 1360 Query: 268 MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYL 89 MTGGHVQGDLLAPEDVVSLL+DDAQLEQKL ++PL +D+QKKK GTKGI +DAEGDA L Sbjct: 1361 MTGGHVQGDLLAPEDVVSLLLDDAQLEQKLRDLPL--QDKQKKKRGTKGILLDAEGDATL 1418 Query: 88 EDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2 ED N SQ NG +PSPD E+ KS++KKR Sbjct: 1419 EDFPN-ISQGNGQEPSPDAERPKSSSKKR 1446 >ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854901|gb|EEE92448.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1483 Score = 350 bits (898), Expect = 1e-94 Identities = 180/207 (86%), Positives = 189/207 (91%) Frame = -3 Query: 622 NILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADT 443 N+L DYMNYRKYRYLRLDGSSTI DRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADT Sbjct: 1191 NMLMDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADT 1250 Query: 442 VIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMT 263 VIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQK TVQQLVMT Sbjct: 1251 VIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKHTVQQLVMT 1310 Query: 262 GGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYLED 83 GGHVQ DLLAPEDVVSLL+DDAQLEQKL EIPL ++DRQKKK TK IR+DAEGDA LED Sbjct: 1311 GGHVQDDLLAPEDVVSLLLDDAQLEQKLREIPLQAKDRQKKKP-TKAIRVDAEGDATLED 1369 Query: 82 LTNPDSQVNGSQPSPDPEKVKSNNKKR 2 LT +Q G++PS D EK+K NNKKR Sbjct: 1370 LTETVTQGTGNEPSEDTEKLKPNNKKR 1396