BLASTX nr result

ID: Panax21_contig00013027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013027
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis ...   370   e-101
ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase...   368   e-100
ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi...   355   5e-96
emb|CBI29799.3| unnamed protein product [Vitis vinifera]              354   6e-96
ref|XP_002308925.1| chromatin remodeling complex subunit [Populu...   350   1e-94

>ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis sativus]
          Length = 1501

 Score =  370 bits (951), Expect = e-101
 Identities = 186/209 (88%), Positives = 198/209 (94%)
 Frame = -3

Query: 628  MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449
            MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA
Sbjct: 1224 MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 1283

Query: 448  DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269
            DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQK+TVQQLV
Sbjct: 1284 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLV 1343

Query: 268  MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYL 89
            MTGGHVQGD+LAPEDVVSLL+DDAQLEQKL EIP++++DRQKKK   KGIR+DAEGDA L
Sbjct: 1344 MTGGHVQGDILAPEDVVSLLLDDAQLEQKLREIPIVAKDRQKKKQ-AKGIRVDAEGDASL 1402

Query: 88   EDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2
            EDLTNP+S+V    PSPDPEK K+N+KKR
Sbjct: 1403 EDLTNPESRVTEYDPSPDPEKTKANSKKR 1431


>ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase INO80-like [Cucumis
            sativus]
          Length = 711

 Score =  368 bits (944), Expect = e-100
 Identities = 185/209 (88%), Positives = 197/209 (94%)
 Frame = -3

Query: 628  MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449
            MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQ RNDIFVFLLSTRAGGLGINLTAA
Sbjct: 434  MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAA 493

Query: 448  DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269
            DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQK+TVQQLV
Sbjct: 494  DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLV 553

Query: 268  MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYL 89
            MTGGHVQGD+LAPEDVVSLL+DDAQLEQKL EIP++++DRQKKK   KGIR+DAEGDA L
Sbjct: 554  MTGGHVQGDILAPEDVVSLLLDDAQLEQKLREIPIVAKDRQKKKQ-AKGIRVDAEGDASL 612

Query: 88   EDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2
            EDLTNP+S+V    PSPDPEK K+N+KKR
Sbjct: 613  EDLTNPESRVTEYDPSPDPEKTKANSKKR 641


>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
          Length = 1563

 Score =  355 bits (910), Expect = 5e-96
 Identities = 184/213 (86%), Positives = 195/213 (91%), Gaps = 4/213 (1%)
 Frame = -3

Query: 628  MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449
            MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQLR+DIFVFLLSTRAGGLGINLTAA
Sbjct: 1241 MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLSTRAGGLGINLTAA 1300

Query: 448  DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269
            DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV
Sbjct: 1301 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 1360

Query: 268  MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPL----LSRDRQKKKSGTKGIRIDAEG 101
            MTGGHVQGDLLAPEDVVSLL+DDAQLEQKL ++PL     S+D+QKKK GTKGI +DAEG
Sbjct: 1361 MTGGHVQGDLLAPEDVVSLLLDDAQLEQKLRDLPLQVRFKSKDKQKKKRGTKGILLDAEG 1420

Query: 100  DAYLEDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2
            DA LED  N  SQ NG +PSPD E+ KS++KKR
Sbjct: 1421 DATLEDFPN-ISQGNGQEPSPDAERPKSSSKKR 1452


>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
          Length = 1557

 Score =  354 bits (909), Expect = 6e-96
 Identities = 183/209 (87%), Positives = 194/209 (92%)
 Frame = -3

Query: 628  MLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAA 449
            MLNILEDYMNYRKYRYLRLDGSSTI DRRDMVRDFQLR+DIFVFLLSTRAGGLGINLTAA
Sbjct: 1241 MLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLSTRAGGLGINLTAA 1300

Query: 448  DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 269
            DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV
Sbjct: 1301 DTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLV 1360

Query: 268  MTGGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYL 89
            MTGGHVQGDLLAPEDVVSLL+DDAQLEQKL ++PL  +D+QKKK GTKGI +DAEGDA L
Sbjct: 1361 MTGGHVQGDLLAPEDVVSLLLDDAQLEQKLRDLPL--QDKQKKKRGTKGILLDAEGDATL 1418

Query: 88   EDLTNPDSQVNGSQPSPDPEKVKSNNKKR 2
            ED  N  SQ NG +PSPD E+ KS++KKR
Sbjct: 1419 EDFPN-ISQGNGQEPSPDAERPKSSSKKR 1446


>ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854901|gb|EEE92448.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1483

 Score =  350 bits (898), Expect = 1e-94
 Identities = 180/207 (86%), Positives = 189/207 (91%)
 Frame = -3

Query: 622  NILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADT 443
            N+L DYMNYRKYRYLRLDGSSTI DRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADT
Sbjct: 1191 NMLMDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADT 1250

Query: 442  VIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMT 263
            VIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQK TVQQLVMT
Sbjct: 1251 VIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKHTVQQLVMT 1310

Query: 262  GGHVQGDLLAPEDVVSLLIDDAQLEQKLSEIPLLSRDRQKKKSGTKGIRIDAEGDAYLED 83
            GGHVQ DLLAPEDVVSLL+DDAQLEQKL EIPL ++DRQKKK  TK IR+DAEGDA LED
Sbjct: 1311 GGHVQDDLLAPEDVVSLLLDDAQLEQKLREIPLQAKDRQKKKP-TKAIRVDAEGDATLED 1369

Query: 82   LTNPDSQVNGSQPSPDPEKVKSNNKKR 2
            LT   +Q  G++PS D EK+K NNKKR
Sbjct: 1370 LTETVTQGTGNEPSEDTEKLKPNNKKR 1396


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