BLASTX nr result

ID: Panax21_contig00011993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011993
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...   149   2e-34
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   146   2e-33
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...   143   1e-32
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...   143   1e-32
ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...   141   5e-32

>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
            gi|223535313|gb|EEF36988.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1794

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/115 (66%), Positives = 92/115 (80%)
 Frame = -2

Query: 346  QRAVISVLGDMRCXXXXXXXXXXXKGRTVSITVSDLVMKQCRHVLRHAAAADEERVFCNL 167
            ++AV+SVL D+             KG+ +  T+ D++MKQCR VLR AAAADEE++FCNL
Sbjct: 729  KKAVLSVLADVCGETPQQKPNRKRKGKHID-TLPDVIMKQCRKVLRRAAAADEEKIFCNL 787

Query: 166  LGKSLLNPNDNDDEGLLGYPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVQEV 2
            LG++LLN +DNDDEGLLG+P MVSRPLDFRTIDLRLA GAYGGSHEAFLEDV+EV
Sbjct: 788  LGRTLLNTSDNDDEGLLGFPTMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDVREV 842


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/115 (62%), Positives = 91/115 (79%)
 Frame = -2

Query: 346  QRAVISVLGDMRCXXXXXXXXXXXKGRTVSITVSDLVMKQCRHVLRHAAAADEERVFCNL 167
            ++AV+SVL D+               R +++ VSD++MKQCR +LRHAAAAD+ +VFC L
Sbjct: 1033 KKAVLSVLADV-LGEGLSQKSNNRNKRKITVPVSDIIMKQCRIILRHAAAADDAKVFCTL 1091

Query: 166  LGKSLLNPNDNDDEGLLGYPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVQEV 2
            LG++L+N  D+DDEGLLGYPAMVSRPLDFRTIDLRLA GAYGGSHE+FLEDV+E+
Sbjct: 1092 LGRNLINSCDHDDEGLLGYPAMVSRPLDFRTIDLRLAVGAYGGSHESFLEDVREL 1146


>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding
           domain-containing protein 9-like [Cucumis sativus]
          Length = 1277

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/115 (62%), Positives = 90/115 (78%)
 Frame = -2

Query: 346 QRAVISVLGDMRCXXXXXXXXXXXKGRTVSITVSDLVMKQCRHVLRHAAAADEERVFCNL 167
           ++AV+S+L D+ C           + R  +I++SD+VMKQCR VLR AAAAD+ +VFCNL
Sbjct: 173 KKAVLSILADI-CGDSLPPKVEKRRKRITTISISDIVMKQCRTVLRRAAAADDAKVFCNL 231

Query: 166 LGKSLLNPNDNDDEGLLGYPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVQEV 2
           LG+ L+  +DNDDEGLLG P MVSRPLDFRTIDLRLA+G+Y GSHEAFLEDVQE+
Sbjct: 232 LGRKLMASSDNDDEGLLGPPGMVSRPLDFRTIDLRLASGSYDGSHEAFLEDVQEL 286


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 2131

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/115 (62%), Positives = 90/115 (78%)
 Frame = -2

Query: 346  QRAVISVLGDMRCXXXXXXXXXXXKGRTVSITVSDLVMKQCRHVLRHAAAADEERVFCNL 167
            ++AV+S+L D+ C           + R  +I++SD+VMKQCR VLR AAAAD+ +VFCNL
Sbjct: 1026 KKAVLSILADI-CGDSLPPKVEKRRKRITTISISDIVMKQCRTVLRRAAAADDAKVFCNL 1084

Query: 166  LGKSLLNPNDNDDEGLLGYPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVQEV 2
            LG+ L+  +DNDDEGLLG P MVSRPLDFRTIDLRLA+G+Y GSHEAFLEDVQE+
Sbjct: 1085 LGRKLMASSDNDDEGLLGPPGMVSRPLDFRTIDLRLASGSYDGSHEAFLEDVQEL 1139


>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2060

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/115 (63%), Positives = 91/115 (79%)
 Frame = -2

Query: 346  QRAVISVLGDMRCXXXXXXXXXXXKGRTVSITVSDLVMKQCRHVLRHAAAADEERVFCNL 167
            ++AVI++L D+             KG+ V  + SDL+MKQCR VLR  A+ D+E+VFCNL
Sbjct: 855  KKAVIALLADVHSGNVQRRPDKKRKGKRVR-SASDLIMKQCRTVLRRVASTDKEKVFCNL 913

Query: 166  LGKSLLNPNDNDDEGLLGYPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVQEV 2
            LG+ +++PNDNDD+GLLG+PAMVSRPLDFRTIDLRLA GAYGGS+EAFLEDVQEV
Sbjct: 914  LGR-IMDPNDNDDKGLLGFPAMVSRPLDFRTIDLRLAVGAYGGSNEAFLEDVQEV 967


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