BLASTX nr result

ID: Panax21_contig00011992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011992
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330281.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
ref|NP_187141.1| heavy-metal-associated domain-containing protei...    70   1e-09
ref|XP_003593878.1| hypothetical protein MTR_2g018790 [Medicago ...    64   6e-08
ref|NP_187173.2| heavy-metal-associated domain-containing protei...    64   7e-08
ref|XP_002884477.1| hypothetical protein ARALYDRAFT_477763 [Arab...    63   9e-08

>ref|XP_002330281.1| predicted protein [Populus trichocarpa] gi|222871316|gb|EEF08447.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
 Frame = -2

Query: 928 ENTPPDPVCIMGVNLSCCEACPGKLKKALLKINGIHSVVVDPKKCIASVTGNIDPVKLVR 749
           EN  P   CI+ V++ CC  C  K+KK L KING++ V ++ KK +  V+G +DP  L R
Sbjct: 3   ENLAPLSACILRVDVCCCSKCSTKVKKRLQKINGVNFVDINTKKGLVMVSGLVDPSTLQR 62

Query: 748 KIRKMGKNTELLSYERYPI-----------NLXXXXXXXXXXXDCCFQFENDHYAKPAAF 602
            I K GK  E+L+YE+ PI           N+            CC +   D        
Sbjct: 63  AITKTGKKAEVLAYEKDPIQAKKKLDQFIRNMQKEHNIRDEENCCCCKVSKDDDKPVTMV 122

Query: 601 QDHEPV 584
            DHE +
Sbjct: 123 HDHEAI 128


>ref|NP_187141.1| heavy-metal-associated domain-containing protein [Arabidopsis
           thaliana] gi|12322857|gb|AAG51419.1|AC009465_19
           hypothetical protein; 55017-55643 [Arabidopsis thaliana]
           gi|332640632|gb|AEE74153.1| heavy-metal-associated
           domain-containing protein [Arabidopsis thaliana]
          Length = 208

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 26/72 (36%), Positives = 49/72 (68%)
 Frame = -2

Query: 910 PVCIMGVNLSCCEACPGKLKKALLKINGIHSVVVDPKKCIASVTGNIDPVKLVRKIRKMG 731
           P+CI+ +NL CCE  P ++KK L ++ G++++ +DP K +  V G  +P  L++ + K+G
Sbjct: 7   PICILKMNLQCCEDFPSRVKKLLRQVKGVYAITIDPVKGLILVCGTAEPSVLIKAVAKLG 66

Query: 730 KNTELLSYERYP 695
           ++ +L +YE+ P
Sbjct: 67  QSPQLYAYEKDP 78


>ref|XP_003593878.1| hypothetical protein MTR_2g018790 [Medicago truncatula]
           gi|355482926|gb|AES64129.1| hypothetical protein
           MTR_2g018790 [Medicago truncatula]
          Length = 291

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 26/76 (34%), Positives = 47/76 (61%)
 Frame = -2

Query: 931 MENTPPDPVCIMGVNLSCCEACPGKLKKALLKINGIHSVVVDPKKCIASVTGNIDPVKLV 752
           M+NT   P+C + V+  C   C   +KK L ++ G+ ++ VDPK+    V GN++P+ L+
Sbjct: 1   MKNTAELPICTLKVDFGCTNGCHSDVKKTLQELKGVKTISVDPKQGKVIVVGNVNPMMLI 60

Query: 751 RKIRKMGKNTELLSYE 704
           + +RK+G+  +L S +
Sbjct: 61  KLLRKIGRKAQLCSLQ 76


>ref|NP_187173.2| heavy-metal-associated domain-containing protein [Arabidopsis
           thaliana] gi|110742167|dbj|BAE99011.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332640685|gb|AEE74206.1| heavy-metal-associated
           domain-containing protein [Arabidopsis thaliana]
          Length = 577

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -2

Query: 904 CIMGVNLSCCEACPGKLKKALLKINGIHSVVVDPKKCIASVTGNIDPVKLVRKIRKMGKN 725
           C++ VN+ C E C  K+KK L KI G++SV  D ++   +VTGNIDP  LV+K+ K GK+
Sbjct: 12  CVLKVNVHC-EGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKH 70

Query: 724 TELL 713
            E+L
Sbjct: 71  AEIL 74


>ref|XP_002884477.1| hypothetical protein ARALYDRAFT_477763 [Arabidopsis lyrata subsp.
           lyrata] gi|297330317|gb|EFH60736.1| hypothetical protein
           ARALYDRAFT_477763 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 24/66 (36%), Positives = 45/66 (68%)
 Frame = -2

Query: 892 VNLSCCEACPGKLKKALLKINGIHSVVVDPKKCIASVTGNIDPVKLVRKIRKMGKNTELL 713
           +NL CCE  P ++KK L K+ G++++ +DP K +  V+G  +P  L++ + K+G++ +L 
Sbjct: 1   MNLQCCEDFPSRIKKLLRKVKGVYAITIDPVKGLILVSGTAEPSVLIKAVAKIGQSPQLY 60

Query: 712 SYERYP 695
           +YE+ P
Sbjct: 61  AYEKDP 66


Top