BLASTX nr result

ID: Panax21_contig00011987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011987
         (1688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB36797.1| cryptochrome 2 [Nicotiana sylvestris]                  667   0.0  
ref|NP_001234245.1| cryptochrome 2 [Solanum lycopersicum] gi|810...   663   0.0  
ref|XP_002285169.2| PREDICTED: cryptochrome-2-like [Vitis vinife...   657   0.0  
emb|CAN71971.1| hypothetical protein VITISV_015253 [Vitis vinifera]   654   0.0  
ref|XP_002531529.1| DNA photolyase, putative [Ricinus communis] ...   650   0.0  

>gb|ABB36797.1| cryptochrome 2 [Nicotiana sylvestris]
          Length = 641

 Score =  667 bits (1722), Expect = 0.0
 Identities = 310/382 (81%), Positives = 348/382 (91%)
 Frame = +3

Query: 543  MDTYCKTIVWFRRDLRIDDNPALAAAARDGSILPVFIWCPKEEGLFYPGRISRWWLKQSL 722
            M++  KTIVWFRRDLRI+DNPALAAAAR+GS+ PVFIW PKEEG FYPGR+SRWWLKQSL
Sbjct: 1    MESNSKTIVWFRRDLRIEDNPALAAAARNGSVFPVFIWSPKEEGQFYPGRVSRWWLKQSL 60

Query: 723  IHLERSLSSLGASLVLIKAQTTLAALLECINAVGATKVVYNHLYDPVSLVRDHNIKQKLG 902
            IHLE+SL SLGA LVLIKAQ+TL+ALL+CI AVGATKVVYNHLYDPVSLVRDHNIKQKLG
Sbjct: 61   IHLEQSLKSLGAELVLIKAQSTLSALLDCIEAVGATKVVYNHLYDPVSLVRDHNIKQKLG 120

Query: 903  ELDISVQSYNGDLLYEPWDIYDDEGHAFTTFDAYWTRCLQMQNETVSHLPPWLLVPASGL 1082
            EL ISVQSYNGDLL EPW++YDD+G  FTTFDAYW + L++Q E VSHLPPW L+PA+G 
Sbjct: 121  ELGISVQSYNGDLLNEPWEVYDDDGKVFTTFDAYWEKSLRLQKEPVSHLPPWKLIPAAGS 180

Query: 1083 VKNCSIEELGLEDELEKPSNALLGRGWSPGWSNADKVLTAFAEQHLIDYSKDRLRVAGNS 1262
            VK CS+EELGLE+E EK SNALLG+GW+PGWSNADK LT F E  L+ YSKDRLRV GNS
Sbjct: 181  VKMCSVEELGLENESEKSSNALLGKGWAPGWSNADKALTEFVENQLLAYSKDRLRVGGNS 240

Query: 1263 TSFLSPYLHFGELSVRRVFHCVRMKQIVWAKEGNSVGEESSTLFLRAIGFREYSRYICFN 1442
            TS LSPYLHFGE+SVR+VF+ VR+KQI+W KEGNSVG+ES++L+LRAIG REYSRYICFN
Sbjct: 241  TSLLSPYLHFGEVSVRKVFNSVRLKQILWTKEGNSVGDESASLYLRAIGLREYSRYICFN 300

Query: 1443 FPFTHERSLLSNLKFFPWHADEAYFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVS 1622
            FPFTHERSLL+NLKFFPW+AD+A FKAWRQGRTGYPLVDAGMRELWATGW+HN+IRVIV+
Sbjct: 301  FPFTHERSLLNNLKFFPWNADQARFKAWRQGRTGYPLVDAGMRELWATGWIHNKIRVIVA 360

Query: 1623 SFFVKVLLLPWQWGMKYFWDTL 1688
            SFFVK LLLPWQWGMKYFWDTL
Sbjct: 361  SFFVKFLLLPWQWGMKYFWDTL 382


>ref|NP_001234245.1| cryptochrome 2 [Solanum lycopersicum]
            gi|8101444|gb|AAF72556.1|AF130425_1 cryptochrome 2
            [Solanum lycopersicum]
            gi|8101446|gb|AAF72557.1|AF130426_1 cryptochrome 2
            [Solanum lycopersicum]
          Length = 635

 Score =  663 bits (1711), Expect = 0.0
 Identities = 306/382 (80%), Positives = 349/382 (91%)
 Frame = +3

Query: 543  MDTYCKTIVWFRRDLRIDDNPALAAAARDGSILPVFIWCPKEEGLFYPGRISRWWLKQSL 722
            M++  KTIVWFRRDLRI+DNPALAAAAR+GS+LPVFIWCPKEEG FYPGR+SRWWLKQSL
Sbjct: 1    MESNYKTIVWFRRDLRIEDNPALAAAARNGSVLPVFIWCPKEEGQFYPGRVSRWWLKQSL 60

Query: 723  IHLERSLSSLGASLVLIKAQTTLAALLECINAVGATKVVYNHLYDPVSLVRDHNIKQKLG 902
            IHL++SL SLGA LVL+KAQ+TL+AL EC++AVGATKVVYNHLYDPVSLVRDHNIKQKLG
Sbjct: 61   IHLKQSLKSLGAELVLMKAQSTLSALTECVDAVGATKVVYNHLYDPVSLVRDHNIKQKLG 120

Query: 903  ELDISVQSYNGDLLYEPWDIYDDEGHAFTTFDAYWTRCLQMQNETVSHLPPWLLVPASGL 1082
            +L ISVQSYNGDLL EPW++YDD+G  FTTFDAYW + L +QNE VS LPPW L  A+G 
Sbjct: 121  DLGISVQSYNGDLLNEPWEVYDDDGKVFTTFDAYWEKSLSIQNEPVSQLPPWRLTQAAGS 180

Query: 1083 VKNCSIEELGLEDELEKPSNALLGRGWSPGWSNADKVLTAFAEQHLIDYSKDRLRVAGNS 1262
            VK CS+EELGLE+E EK SNALLG+GW+PGWSNADK LT F E +L+ YSKDRLRV GNS
Sbjct: 181  VKMCSVEELGLENESEKSSNALLGKGWAPGWSNADKALTEFVESNLLAYSKDRLRVGGNS 240

Query: 1263 TSFLSPYLHFGELSVRRVFHCVRMKQIVWAKEGNSVGEESSTLFLRAIGFREYSRYICFN 1442
            TS LSPYLHFGE+SVR+VF+ VR+KQI+W KEGNSVG++S+T++LRAIG REYSRYICFN
Sbjct: 241  TSLLSPYLHFGEVSVRKVFNSVRLKQILWTKEGNSVGKDSATIYLRAIGLREYSRYICFN 300

Query: 1443 FPFTHERSLLSNLKFFPWHADEAYFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVS 1622
            FPFTHERSLL+NL+FFPW+AD+A+FKAWRQGRTGYPLVDAGMRELWATGW+HN+IRVIVS
Sbjct: 301  FPFTHERSLLNNLRFFPWNADQAHFKAWRQGRTGYPLVDAGMRELWATGWVHNKIRVIVS 360

Query: 1623 SFFVKVLLLPWQWGMKYFWDTL 1688
            SFFVK LLLPWQWGMKYFWDTL
Sbjct: 361  SFFVKFLLLPWQWGMKYFWDTL 382


>ref|XP_002285169.2| PREDICTED: cryptochrome-2-like [Vitis vinifera]
            gi|296083651|emb|CBI23640.3| unnamed protein product
            [Vitis vinifera]
          Length = 646

 Score =  657 bits (1694), Expect = 0.0
 Identities = 305/382 (79%), Positives = 340/382 (89%)
 Frame = +3

Query: 543  MDTYCKTIVWFRRDLRIDDNPALAAAARDGSILPVFIWCPKEEGLFYPGRISRWWLKQSL 722
            M +  +T+VWFRRDLR+DDNPALA AA++GS+LPVFIWCPKEEG FYPGR+SRWWLKQSL
Sbjct: 1    MSSDSRTVVWFRRDLRVDDNPALATAAKEGSVLPVFIWCPKEEGQFYPGRVSRWWLKQSL 60

Query: 723  IHLERSLSSLGASLVLIKAQTTLAALLECINAVGATKVVYNHLYDPVSLVRDHNIKQKLG 902
            +HL++SL SLGA L+LIKA++T+ ALLECI+A+GATK+VYNHLYDP+SLVRDH+IKQKL 
Sbjct: 61   MHLKQSLRSLGADLLLIKAESTIEALLECIHAIGATKLVYNHLYDPISLVRDHSIKQKLM 120

Query: 903  ELDISVQSYNGDLLYEPWDIYDDEGHAFTTFDAYWTRCLQMQNETVSHLPPWLLVPASGL 1082
            EL +SVQSYNGDLLY+PWDIYDD+G+AFTTF+AYW +CL MQ E VS LPPW LVPA+G 
Sbjct: 121  ELGMSVQSYNGDLLYKPWDIYDDKGNAFTTFEAYWNKCLSMQMEFVSLLPPWRLVPAAGK 180

Query: 1083 VKNCSIEELGLEDELEKPSNALLGRGWSPGWSNADKVLTAFAEQHLIDYSKDRLRVAGNS 1262
            V NCSIEELGLEDE EK SNALLGRGWSPGWSNADK LT F EQHL DYSK RL+V GNS
Sbjct: 181  VNNCSIEELGLEDESEKSSNALLGRGWSPGWSNADKALTEFIEQHLFDYSKKRLKVEGNS 240

Query: 1263 TSFLSPYLHFGELSVRRVFHCVRMKQIVWAKEGNSVGEESSTLFLRAIGFREYSRYICFN 1442
            TS LSPYLHFGELSVR+V H VRMKQ++W KEGNSV EES  LFLRAIG REYSRY+CFN
Sbjct: 241  TSLLSPYLHFGELSVRKVLHSVRMKQLLWVKEGNSVWEESVDLFLRAIGLREYSRYLCFN 300

Query: 1443 FPFTHERSLLSNLKFFPWHADEAYFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVS 1622
            FP THER LLSNLK FPWHA   +FKAWRQGRTGYPLVDAGMRELWATGW+HNRIRVIVS
Sbjct: 301  FPSTHERPLLSNLKHFPWHAHHVHFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVS 360

Query: 1623 SFFVKVLLLPWQWGMKYFWDTL 1688
            SF VK LLLPW+WGMKYFWDTL
Sbjct: 361  SFAVKFLLLPWKWGMKYFWDTL 382


>emb|CAN71971.1| hypothetical protein VITISV_015253 [Vitis vinifera]
          Length = 641

 Score =  654 bits (1688), Expect = 0.0
 Identities = 304/382 (79%), Positives = 339/382 (88%)
 Frame = +3

Query: 543  MDTYCKTIVWFRRDLRIDDNPALAAAARDGSILPVFIWCPKEEGLFYPGRISRWWLKQSL 722
            M +  +T+VWFRRDLR+DDNPALA AA++GS+LPVFIWCPKEEG FYPGR+SRWWLKQSL
Sbjct: 1    MSSDSRTVVWFRRDLRVDDNPALATAAKEGSVLPVFIWCPKEEGQFYPGRVSRWWLKQSL 60

Query: 723  IHLERSLSSLGASLVLIKAQTTLAALLECINAVGATKVVYNHLYDPVSLVRDHNIKQKLG 902
            +HL++SL SLGA L+LIKA++T+ ALLECI+A+GATK+VYNHLYDP+SLVRDH+IKQKL 
Sbjct: 61   MHLKQSLRSLGADLLLIKAESTIEALLECIHAIGATKLVYNHLYDPISLVRDHSIKQKLM 120

Query: 903  ELDISVQSYNGDLLYEPWDIYDDEGHAFTTFDAYWTRCLQMQNETVSHLPPWLLVPASGL 1082
            EL +SVQSYNGDLLY+PWDIYDD+G+AFTTF+AYW +CL  Q E VS LPPW LVPA+G 
Sbjct: 121  ELGMSVQSYNGDLLYKPWDIYDDKGNAFTTFEAYWNKCLSXQMEFVSLLPPWRLVPAAGK 180

Query: 1083 VKNCSIEELGLEDELEKPSNALLGRGWSPGWSNADKVLTAFAEQHLIDYSKDRLRVAGNS 1262
            V NCSIEELGLEDE EK SNALLGRGWSPGWSNADK LT F EQHL DYSK RL+V GNS
Sbjct: 181  VNNCSIEELGLEDESEKSSNALLGRGWSPGWSNADKALTEFIEQHLFDYSKXRLKVEGNS 240

Query: 1263 TSFLSPYLHFGELSVRRVFHCVRMKQIVWAKEGNSVGEESSTLFLRAIGFREYSRYICFN 1442
            TS LSPYLHFGELSVR+V H VRMKQ++W KEGNSV EES  LFLRAIG REYSRY+CFN
Sbjct: 241  TSLLSPYLHFGELSVRKVLHSVRMKQLLWVKEGNSVWEESVDLFLRAIGLREYSRYLCFN 300

Query: 1443 FPFTHERSLLSNLKFFPWHADEAYFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVS 1622
            FP THER LLSNLK FPWHA   +FKAWRQGRTGYPLVDAGMRELWATGW+HNRIRVIVS
Sbjct: 301  FPSTHERPLLSNLKHFPWHAXHVHFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVS 360

Query: 1623 SFFVKVLLLPWQWGMKYFWDTL 1688
            SF VK LLLPW+WGMKYFWDTL
Sbjct: 361  SFAVKFLLLPWKWGMKYFWDTL 382


>ref|XP_002531529.1| DNA photolyase, putative [Ricinus communis]
            gi|223528846|gb|EEF30848.1| DNA photolyase, putative
            [Ricinus communis]
          Length = 640

 Score =  650 bits (1677), Expect = 0.0
 Identities = 298/377 (79%), Positives = 334/377 (88%)
 Frame = +3

Query: 558  KTIVWFRRDLRIDDNPALAAAARDGSILPVFIWCPKEEGLFYPGRISRWWLKQSLIHLER 737
            KTIVWFRRDLRI+DNPALAAAARDG ILPVFIWCP+EEG FYPGR+SRWWLKQSL HL  
Sbjct: 5    KTIVWFRRDLRIEDNPALAAAARDGCILPVFIWCPQEEGQFYPGRVSRWWLKQSLAHLGH 64

Query: 738  SLSSLGASLVLIKAQTTLAALLECINAVGATKVVYNHLYDPVSLVRDHNIKQKLGELDIS 917
            SL SLGA L+LIK  +TLAALL+C+N +GATKVV+N LYDPVSLVRDHNIK+KL EL IS
Sbjct: 65   SLKSLGAELLLIKTHSTLAALLDCVNVIGATKVVFNRLYDPVSLVRDHNIKEKLVELGIS 124

Query: 918  VQSYNGDLLYEPWDIYDDEGHAFTTFDAYWTRCLQMQNETVSHLPPWLLVPASGLVKNCS 1097
            +QSYNGDLLYEPW+IYD+ GHAF TFD YW +CL MQ E VSHLPPW LVPA+  V +CS
Sbjct: 125  IQSYNGDLLYEPWEIYDESGHAFMTFDQYWDKCLHMQMEPVSHLPPWRLVPAAETVNSCS 184

Query: 1098 IEELGLEDELEKPSNALLGRGWSPGWSNADKVLTAFAEQHLIDYSKDRLRVAGNSTSFLS 1277
            +EELGLEDE EK SN+LLGR WSPGWSNADK L  F EQHL++YSK RL V GNSTS LS
Sbjct: 185  VEELGLEDEAEKSSNSLLGRAWSPGWSNADKALAEFVEQHLVNYSKKRLEVGGNSTSLLS 244

Query: 1278 PYLHFGELSVRRVFHCVRMKQIVWAKEGNSVGEESSTLFLRAIGFREYSRYICFNFPFTH 1457
            PYLHFGELSVR+VFHCV+MKQ++WAKE NSVG ES TLFL++IG REYSRY+CFNFP+TH
Sbjct: 245  PYLHFGELSVRKVFHCVQMKQLLWAKEENSVGRESVTLFLKSIGLREYSRYLCFNFPYTH 304

Query: 1458 ERSLLSNLKFFPWHADEAYFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFFVK 1637
            ERS LSNL+ FPW+A++A+FKAWRQGRTGYPLVDAGMRELWATGW+HN+IRVIVSSF VK
Sbjct: 305  ERSFLSNLRLFPWNANQAHFKAWRQGRTGYPLVDAGMRELWATGWIHNKIRVIVSSFAVK 364

Query: 1638 VLLLPWQWGMKYFWDTL 1688
             LLLPW+WGMKYFWDTL
Sbjct: 365  ALLLPWRWGMKYFWDTL 381


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