BLASTX nr result

ID: Panax21_contig00011986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011986
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512473.1| WD-repeat protein, putative [Ricinus communi...   404   e-110
ref|XP_003556527.1| PREDICTED: topless-related protein 3-like [G...   404   e-110
ref|XP_003536058.1| PREDICTED: topless-related protein 3-like [G...   400   e-109
ref|XP_002283157.1| PREDICTED: topless-related protein 3 [Vitis ...   400   e-109
ref|XP_003554627.1| PREDICTED: topless-related protein 3-like [G...   399   e-109

>ref|XP_002512473.1| WD-repeat protein, putative [Ricinus communis]
            gi|223548434|gb|EEF49925.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 1132

 Score =  404 bits (1038), Expect = e-110
 Identities = 194/241 (80%), Positives = 211/241 (87%), Gaps = 5/241 (2%)
 Frame = -1

Query: 709  GMLEYQNADHEHLMKRLRPAQSVEEVTYPTARQQASWSLDDLPRTVAFTMHQGSSSVTSM 530
            GM++YQN DHE LMKRLRPAQSV+EVTYPT+RQQASWSLDDLPRTVA TMHQGS+ VTSM
Sbjct: 294  GMVDYQNPDHEQLMKRLRPAQSVDEVTYPTSRQQASWSLDDLPRTVALTMHQGSA-VTSM 352

Query: 529  DFHPSHHTLLLVGYGNGEITLWEVGMREKLVSKLFKIWDIA-----FQASVGKDAPISVS 365
            DFHPSH TLLLVG  NGE+TLWE+  RE+LVSK FKIW+I      FQAS  KDAP+SV+
Sbjct: 353  DFHPSHQTLLLVGSANGEVTLWELVQRERLVSKPFKIWEITSCSLQFQASFVKDAPVSVN 412

Query: 364  RVTWSPDGNYLGAAFTKHLIHLYTYAGPNDLSQHLEIDAHVGGVNDLAFAHPNKQLCIVT 185
            RVTWSPDG+ +GAAF KHLIHLY Y G +DL Q LEIDAH GGVNDLAFAHPNKQLC+VT
Sbjct: 413  RVTWSPDGSLVGAAFNKHLIHLYAYTGSSDLRQQLEIDAHAGGVNDLAFAHPNKQLCVVT 472

Query: 184  CGDDKAIKVWDLSGRKLFNFEGHESPVYSICPHQKENIQFIFSTASDGKIKAWLYDNMGS 5
            CGDDK IKVWDL GRKLFNFEGHE+PVYSICPH KENIQFIFSTA DGKIKAWLYDN+GS
Sbjct: 473  CGDDKLIKVWDLGGRKLFNFEGHEAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNVGS 532

Query: 4    R 2
            R
Sbjct: 533  R 533


>ref|XP_003556527.1| PREDICTED: topless-related protein 3-like [Glycine max]
          Length = 1131

 Score =  404 bits (1037), Expect = e-110
 Identities = 192/241 (79%), Positives = 214/241 (88%), Gaps = 5/241 (2%)
 Frame = -1

Query: 709  GMLEYQNADHEHLMKRLRPAQSVEEVTYPTARQQASWSLDDLPRTVAFTMHQGSSSVTSM 530
            GM++YQNADHE LMKRLRP  SVEEV+YP ARQ ASWSLDDLPRTV  T+HQGSS VTSM
Sbjct: 295  GMIDYQNADHEQLMKRLRPGHSVEEVSYPLARQ-ASWSLDDLPRTVTMTLHQGSS-VTSM 352

Query: 529  DFHPSHHTLLLVGYGNGEITLWEVGMREKLVSKLFKIWDIA-----FQASVGKDAPISVS 365
            DFHPSHHTLLL G  NGEI+LWE+ +REKLVSK FKIWD++     FQA+  KDAPISVS
Sbjct: 353  DFHPSHHTLLLAGSNNGEISLWELSLREKLVSKPFKIWDVSACSLPFQAAAVKDAPISVS 412

Query: 364  RVTWSPDGNYLGAAFTKHLIHLYTYAGPNDLSQHLEIDAHVGGVNDLAFAHPNKQLCIVT 185
            RVTWSPDG+++G AFTKHLIHLY Y GPN+L+Q +E+DAHVGGVNDL+FAHPNKQ+CIVT
Sbjct: 413  RVTWSPDGSFVGIAFTKHLIHLYAYTGPNELTQRIEVDAHVGGVNDLSFAHPNKQMCIVT 472

Query: 184  CGDDKAIKVWDLSGRKLFNFEGHESPVYSICPHQKENIQFIFSTASDGKIKAWLYDNMGS 5
            CGDDK IKVWDL+GRKLF+FEGHE+PVYSICPH KENIQFIFSTA DGKIKAWLYDNMGS
Sbjct: 473  CGDDKLIKVWDLNGRKLFSFEGHEAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGS 532

Query: 4    R 2
            R
Sbjct: 533  R 533


>ref|XP_003536058.1| PREDICTED: topless-related protein 3-like [Glycine max]
          Length = 1130

 Score =  400 bits (1029), Expect = e-109
 Identities = 193/241 (80%), Positives = 213/241 (88%), Gaps = 5/241 (2%)
 Frame = -1

Query: 709  GMLEYQNADHEHLMKRLRPAQSVEEVTYPTARQQASWSLDDLPRTVAFTMHQGSSSVTSM 530
            GM++YQNADH+ LMKRLRP  SVEEV+YP ARQ ASWSLDDLPRTV  T+HQGSS VTSM
Sbjct: 294  GMVDYQNADHDQLMKRLRPGHSVEEVSYPLARQ-ASWSLDDLPRTVTMTLHQGSS-VTSM 351

Query: 529  DFHPSHHTLLLVGYGNGEITLWEVGMREKLVSKLFKIWDIA-----FQASVGKDAPISVS 365
            DFHPSHHTLLLVG  NGEITLWE+ +REKLVSK FKIWD++     FQA+  KDAPISVS
Sbjct: 352  DFHPSHHTLLLVGSNNGEITLWELSLREKLVSKPFKIWDVSACSLPFQAAAVKDAPISVS 411

Query: 364  RVTWSPDGNYLGAAFTKHLIHLYTYAGPNDLSQHLEIDAHVGGVNDLAFAHPNKQLCIVT 185
            RVTWSPDG+++G AFTKHLIHLY   G N+L+Q +E+DAHVGGVNDLAFAHPNKQLCIVT
Sbjct: 412  RVTWSPDGSFVGIAFTKHLIHLYACTGSNELTQRIEVDAHVGGVNDLAFAHPNKQLCIVT 471

Query: 184  CGDDKAIKVWDLSGRKLFNFEGHESPVYSICPHQKENIQFIFSTASDGKIKAWLYDNMGS 5
            CGDDK IKVWDL+GRKLF+FEGHE+PVYSICPH KENIQFIFSTA DGKIKAWLYDNMGS
Sbjct: 472  CGDDKLIKVWDLNGRKLFSFEGHEAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGS 531

Query: 4    R 2
            R
Sbjct: 532  R 532


>ref|XP_002283157.1| PREDICTED: topless-related protein 3 [Vitis vinifera]
            gi|296089734|emb|CBI39553.3| unnamed protein product
            [Vitis vinifera]
          Length = 1132

 Score =  400 bits (1027), Expect = e-109
 Identities = 190/243 (78%), Positives = 212/243 (87%), Gaps = 5/243 (2%)
 Frame = -1

Query: 715  TLGMLEYQNADHEHLMKRLRPAQSVEEVTYPTARQQASWSLDDLPRTVAFTMHQGSSSVT 536
            TLGM++YQN + E LMKRLR AQ+VEEVTYP +RQQASWSLDDLPR VAFTM QGS+ VT
Sbjct: 292  TLGMVDYQNLEQEQLMKRLRLAQNVEEVTYPASRQQASWSLDDLPRMVAFTMQQGST-VT 350

Query: 535  SMDFHPSHHTLLLVGYGNGEITLWEVGMREKLVSKLFKIWDIA-----FQASVGKDAPIS 371
            SMDFHPSHHTLLLVG GNG+ITLWEV +RE+LV+K FKIWD+       QAS+ KDA I 
Sbjct: 351  SMDFHPSHHTLLLVGSGNGDITLWEVALRERLVTKQFKIWDVTACSLPVQASIAKDASIP 410

Query: 370  VSRVTWSPDGNYLGAAFTKHLIHLYTYAGPNDLSQHLEIDAHVGGVNDLAFAHPNKQLCI 191
            VSRV WSPDGN++G AFTKHLIHLY Y G N+L QHLEIDAHVG VND+AFAHPNKQLC+
Sbjct: 411  VSRVAWSPDGNFIGVAFTKHLIHLYAYTGSNELRQHLEIDAHVGCVNDIAFAHPNKQLCV 470

Query: 190  VTCGDDKAIKVWDLSGRKLFNFEGHESPVYSICPHQKENIQFIFSTASDGKIKAWLYDNM 11
            VTCGDDK IKVWD++GRKLFNFEGHE+PVYSICPH KE+IQFIFSTA DGKIKAWLYDN+
Sbjct: 471  VTCGDDKLIKVWDMNGRKLFNFEGHEAPVYSICPHHKESIQFIFSTAMDGKIKAWLYDNI 530

Query: 10   GSR 2
            GSR
Sbjct: 531  GSR 533


>ref|XP_003554627.1| PREDICTED: topless-related protein 3-like [Glycine max]
          Length = 1131

 Score =  399 bits (1024), Expect = e-109
 Identities = 193/243 (79%), Positives = 214/243 (88%), Gaps = 5/243 (2%)
 Frame = -1

Query: 715  TLGMLEYQNADHEHLMKRLRPAQSVEEVTYPTARQQASWSLDDLPRTVAFTMHQGSSSVT 536
            T GM +YQNADHE LMKRLRPA SVEEV+ P AR  ASWSLDDLPRTVA T+HQGSS VT
Sbjct: 292  TAGMADYQNADHEQLMKRLRPAPSVEEVSCPAARP-ASWSLDDLPRTVAMTLHQGSS-VT 349

Query: 535  SMDFHPSHHTLLLVGYGNGEITLWEVGMREKLVSKLFKIWDIA-----FQASVGKDAPIS 371
            SMDFHPSH TLLLVG  NGEITLWE+G+R++LVSK FKIWDI+     FQA++ KDAPIS
Sbjct: 350  SMDFHPSHQTLLLVGSNNGEITLWELGLRDRLVSKPFKIWDISACSLPFQAAMVKDAPIS 409

Query: 370  VSRVTWSPDGNYLGAAFTKHLIHLYTYAGPNDLSQHLEIDAHVGGVNDLAFAHPNKQLCI 191
            VSRVTWS DGN++G AFTKHLIHLY Y G N+L+Q +E+DAH+GGVNDLAFAHPNKQLCI
Sbjct: 410  VSRVTWSLDGNFVGVAFTKHLIHLYAYTGSNELAQRIEVDAHIGGVNDLAFAHPNKQLCI 469

Query: 190  VTCGDDKAIKVWDLSGRKLFNFEGHESPVYSICPHQKENIQFIFSTASDGKIKAWLYDNM 11
            VTCGDDK IKVWDL+GRKLFNFEGHE+PVYSICPH KE+IQF+FSTA DGKIKAWLYDNM
Sbjct: 470  VTCGDDKLIKVWDLTGRKLFNFEGHEAPVYSICPHHKESIQFVFSTAIDGKIKAWLYDNM 529

Query: 10   GSR 2
            GSR
Sbjct: 530  GSR 532


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