BLASTX nr result

ID: Panax21_contig00011983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011983
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67...   193   2e-47
gb|AFK43456.1| unknown [Lotus japonicus]                              190   1e-46
ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67...   190   2e-46
emb|CAN74339.1| hypothetical protein VITISV_018334 [Vitis vinifera]   190   2e-46
ref|XP_002514931.1| Protein AFR, putative [Ricinus communis] gi|...   189   3e-46

>ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 388

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/105 (85%), Positives = 97/105 (92%)
 Frame = +3

Query: 3   GCVMVTAYAVLDKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFRFGILDGKL 182
           GCVMVTAYAVL+KKLFCMEWKNQRKLAIFNPEDNSWKMVPVP+TGSSSIGFRFGILDGKL
Sbjct: 284 GCVMVTAYAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKL 343

Query: 183 LFFTLEEEPGYTTLLYDPNSAPGSEWQASEIKLSGSCLCIVTMKA 317
           L F+LEEEP Y TLLYDPN+APGSEW  S+I+ SG CLC VT+KA
Sbjct: 344 LLFSLEEEPSYKTLLYDPNAAPGSEWHTSDIRPSGLCLCSVTIKA 388


>gb|AFK43456.1| unknown [Lotus japonicus]
          Length = 202

 Score =  190 bits (483), Expect = 1e-46
 Identities = 88/105 (83%), Positives = 97/105 (92%)
 Frame = +3

Query: 3   GCVMVTAYAVLDKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFRFGILDGKL 182
           GCVMVTA+AVL+KKLFCMEWKNQRKLAIFNPEDNSWKMVPVP+TGS+SIGFRFGILDGKL
Sbjct: 98  GCVMVTAHAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSTSIGFRFGILDGKL 157

Query: 183 LFFTLEEEPGYTTLLYDPNSAPGSEWQASEIKLSGSCLCIVTMKA 317
           L F+LE+EP Y TLLYDPN+APG EW+ SEIK SG CLC VT+KA
Sbjct: 158 LLFSLEDEPAYKTLLYDPNAAPGKEWRTSEIKPSGLCLCSVTIKA 202


>ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67480 [Vitis vinifera]
           gi|297738424|emb|CBI27625.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  190 bits (482), Expect = 2e-46
 Identities = 90/105 (85%), Positives = 98/105 (93%)
 Frame = +3

Query: 3   GCVMVTAYAVLDKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFRFGILDGKL 182
           G VMVTA+AVL KKLFCMEWKNQRKLAIFNPEDNSWKMVPVP+TGSSSIGFRFGIL+GKL
Sbjct: 281 GRVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKL 340

Query: 183 LFFTLEEEPGYTTLLYDPNSAPGSEWQASEIKLSGSCLCIVTMKA 317
           L F+LEE+PGY TLLYDP++APGSEWQ SEIK SGSCLC VT+KA
Sbjct: 341 LLFSLEEDPGYRTLLYDPDAAPGSEWQTSEIKPSGSCLCSVTIKA 385


>emb|CAN74339.1| hypothetical protein VITISV_018334 [Vitis vinifera]
          Length = 371

 Score =  190 bits (482), Expect = 2e-46
 Identities = 90/105 (85%), Positives = 98/105 (93%)
 Frame = +3

Query: 3   GCVMVTAYAVLDKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFRFGILDGKL 182
           G VMVTA+AVL KKLFCMEWKNQRKLAIFNPEDNSWKMVPVP+TGSSSIGFRFGIL+GKL
Sbjct: 267 GRVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKL 326

Query: 183 LFFTLEEEPGYTTLLYDPNSAPGSEWQASEIKLSGSCLCIVTMKA 317
           L F+LEE+PGY TLLYDP++APGSEWQ SEIK SGSCLC VT+KA
Sbjct: 327 LLFSLEEDPGYRTLLYDPDAAPGSEWQTSEIKPSGSCLCSVTIKA 371


>ref|XP_002514931.1| Protein AFR, putative [Ricinus communis]
           gi|223545982|gb|EEF47485.1| Protein AFR, putative
           [Ricinus communis]
          Length = 391

 Score =  189 bits (480), Expect = 3e-46
 Identities = 89/105 (84%), Positives = 96/105 (91%)
 Frame = +3

Query: 3   GCVMVTAYAVLDKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFRFGILDGKL 182
           GCVMVTA+AVL KKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGF+FGILDGKL
Sbjct: 287 GCVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFQFGILDGKL 346

Query: 183 LFFTLEEEPGYTTLLYDPNSAPGSEWQASEIKLSGSCLCIVTMKA 317
           L F+LE+ P Y TLLYDPN++PGSEWQ SEIK SG CLC VT+KA
Sbjct: 347 LLFSLEKAPDYHTLLYDPNASPGSEWQTSEIKPSGQCLCSVTIKA 391


Top